Planaria EST Database


DrC_02972

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_02972
         (848 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q27245|YH24_CAEEL  Putative aminopeptidase W07G4.4 in chr...   105   2e-22
sp|P47707|AMPA_MYCSA  Probable cytosol aminopeptidase (Leuci...    59   1e-08
sp|O67868|AMPA_AQUAE  Probable cytosol aminopeptidase (Leuci...    59   1e-08
sp|P75206|AMPA_MYCPN  Probable cytosol aminopeptidase (Leuci...    58   3e-08
sp|O84049|AMPA_CHLTR  Probable cytosol aminopeptidase (Leuci...    58   3e-08
sp|P38019|AMPA_CHLMU  Probable cytosol aminopeptidase (Leuci...    58   3e-08
sp|O32106|AMPA_BACSU  Probable cytosol aminopeptidase (Leuci...    57   6e-08
sp|Q8G1M4|AMPA_BRUSU  Probable cytosol aminopeptidase (Leuci...    57   8e-08
sp|Q8YG99|AMPA_BRUME  Probable cytosol aminopeptidase (Leuci...    57   8e-08
sp|Q6MH10|AMPA_BDEBA  Probable cytosol aminopeptidase (Leuci...    55   2e-07
>sp|Q27245|YH24_CAEEL Putative aminopeptidase W07G4.4 in chromosome V
          Length = 522

 Score =  105 bits (261), Expect = 2e-22
 Identities = 47/86 (54%), Positives = 62/86 (72%)
 Frame = +2

Query: 590 IERHDGRVVKFEYDSKDQVEETIFLVGKGITYDTGGADVKAGGHMAGMHRDKCGAAAVTG 769
           ++ H  R+++ EY  + + ++T F+VGKG+T DTGG D+K GGHM GM RDK G+A V G
Sbjct: 244 VKEHQARLIRLEYVGEGETQDTFFVVGKGVTIDTGGCDLKTGGHMFGMCRDKYGSAVVGG 303

Query: 770 FFKALSLLKPKKFKAVGLCAYVRNSI 847
           FFKA+ +LKPK  KAVG    VRNSI
Sbjct: 304 FFKAIDVLKPKNIKAVGYMCMVRNSI 329
>sp|P47707|AMPA_MYCSA Probable cytosol aminopeptidase (Leucine aminopeptidase) (LAP)
           (Leucyl aminopeptidase)
          Length = 520

 Score = 59.3 bits (142), Expect = 1e-08
 Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
 Frame = +2

Query: 575 ELILVIER---HDGRVVKFEYDSKDQVEETIFLVGKGITYDTGGADVKAGGHMAGMHRDK 745
           +L+L + +   ++ RVV  EY      +E   LVGKGIT+D+GG  +K    M GM  D 
Sbjct: 197 DLLLSVNKGSVYEPRVVIIEYKGNPSSQEKTVLVGKGITFDSGGYSLKPPKFMLGMKYDM 256

Query: 746 CGAAAVTGFFKALSLLKPKKFKAVGLC 826
            G+A V    KA++ LKP K  +  +C
Sbjct: 257 SGSAIVAAVMKAIAQLKPNKNVSAIMC 283
>sp|O67868|AMPA_AQUAE Probable cytosol aminopeptidase (Leucine aminopeptidase) (LAP)
           (Leucyl aminopeptidase)
          Length = 493

 Score = 59.3 bits (142), Expect = 1e-08
 Identities = 28/64 (43%), Positives = 40/64 (62%)
 Frame = +2

Query: 608 RVVKFEYDSKDQVEETIFLVGKGITYDTGGADVKAGGHMAGMHRDKCGAAAVTGFFKALS 787
           R +   Y    + +E I LVGKG+T+D+GG ++K G +M  M  DK GA AV G  +A++
Sbjct: 236 RFIHLIYKPSGKPKEKIALVGKGLTFDSGGLNIKPGDYMRTMKMDKSGACAVLGIMRAIA 295

Query: 788 LLKP 799
            LKP
Sbjct: 296 QLKP 299
>sp|P75206|AMPA_MYCPN Probable cytosol aminopeptidase (Leucine aminopeptidase) (LAP)
           (Leucyl aminopeptidase)
          Length = 445

 Score = 58.2 bits (139), Expect = 3e-08
 Identities = 32/80 (40%), Positives = 45/80 (56%)
 Frame = +2

Query: 602 DGRVVKFEYDSKDQVEETIFLVGKGITYDTGGADVKAGGHMAGMHRDKCGAAAVTGFFKA 781
           + R++   Y++  +  ET+ LVGKGITYD+GG ++K G +M GM  D  GAA V     A
Sbjct: 194 EARLLVISYNNNKKSSETLALVGKGITYDSGGMNIKTGDYMRGMKYDMSGAAIVCSTVLA 253

Query: 782 LSLLKPKKFKAVGLCAYVRN 841
           L+  K K    V + A   N
Sbjct: 254 LAKNKVKT-NVVAVAALTEN 272
>sp|O84049|AMPA_CHLTR Probable cytosol aminopeptidase (Leucine aminopeptidase) (LAP)
           (Leucyl aminopeptidase)
          Length = 499

 Score = 58.2 bits (139), Expect = 3e-08
 Identities = 31/84 (36%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
 Frame = +2

Query: 608 RVVKFEYDSKDQVEETIFLVGKGITYDTGGADVKAGGHMAGMHRDKCGAAAVTGFFKALS 787
           R +  +Y  K + ++   L+GKG+T+D+GG D+K G  M  M  D  GAA V G F AL+
Sbjct: 242 RFIVLDYQGKPKSKDRTVLIGKGVTFDSGGLDLKPGKAMITMKEDMAGAATVLGIFSALA 301

Query: 788 LLK---------PKKFKAVGLCAY 832
            L+         P    A+G  AY
Sbjct: 302 SLELPINVTGIIPATENAIGSAAY 325
>sp|P38019|AMPA_CHLMU Probable cytosol aminopeptidase (Leucine aminopeptidase) (LAP)
           (Leucyl aminopeptidase)
          Length = 499

 Score = 58.2 bits (139), Expect = 3e-08
 Identities = 31/84 (36%), Positives = 44/84 (52%), Gaps = 9/84 (10%)
 Frame = +2

Query: 608 RVVKFEYDSKDQVEETIFLVGKGITYDTGGADVKAGGHMAGMHRDKCGAAAVTGFFKALS 787
           R +  +Y  K + ++   L+GKG+T+D+GG D+K G  M  M  D  GAA V G F AL+
Sbjct: 242 RFIVLDYQGKPKSKDRTVLIGKGVTFDSGGLDLKPGKAMITMKEDMAGAATVLGIFSALA 301

Query: 788 LLK---------PKKFKAVGLCAY 832
            L+         P    A+G  AY
Sbjct: 302 SLELPINVTGIIPATENAIGSAAY 325
>sp|O32106|AMPA_BACSU Probable cytosol aminopeptidase (Leucine aminopeptidase) (LAP)
           (Leucyl aminopeptidase)
          Length = 500

 Score = 57.0 bits (136), Expect = 6e-08
 Identities = 26/66 (39%), Positives = 41/66 (62%)
 Frame = +2

Query: 608 RVVKFEYDSKDQVEETIFLVGKGITYDTGGADVKAGGHMAGMHRDKCGAAAVTGFFKALS 787
           +++  +Y  K + E+ + LVGKGIT+DTGG  +K    + GM  D  GAAAV G  + + 
Sbjct: 240 KMIVLKYQGKKEWEDVVGLVGKGITFDTGGYSIKTKSGIVGMKSDMGGAAAVLGAMETIG 299

Query: 788 LLKPKK 805
            L+P++
Sbjct: 300 ELRPEQ 305
>sp|Q8G1M4|AMPA_BRUSU Probable cytosol aminopeptidase (Leucine aminopeptidase) (LAP)
           (Leucyl aminopeptidase)
          Length = 497

 Score = 56.6 bits (135), Expect = 8e-08
 Identities = 32/78 (41%), Positives = 43/78 (55%)
 Frame = +2

Query: 608 RVVKFEYDSKDQVEETIFLVGKGITYDTGGADVKAGGHMAGMHRDKCGAAAVTGFFKALS 787
           R+V  E+      E+ I  VGKG+ +DTGG  +K   +M  M  D  GAAAVTG  +AL+
Sbjct: 242 RLVVMEWHGAKGKEKPIAFVGKGVVFDTGGISIKPAANMEDMKGDMGGAAAVTGLMRALA 301

Query: 788 LLKPKKFKAVGLCAYVRN 841
             K  K  A+G+   V N
Sbjct: 302 GRK-AKVNAIGVIGLVEN 318
>sp|Q8YG99|AMPA_BRUME Probable cytosol aminopeptidase (Leucine aminopeptidase) (LAP)
           (Leucyl aminopeptidase)
          Length = 485

 Score = 56.6 bits (135), Expect = 8e-08
 Identities = 32/78 (41%), Positives = 43/78 (55%)
 Frame = +2

Query: 608 RVVKFEYDSKDQVEETIFLVGKGITYDTGGADVKAGGHMAGMHRDKCGAAAVTGFFKALS 787
           R+V  E+      E+ I  VGKG+ +DTGG  +K   +M  M  D  GAAAVTG  +AL+
Sbjct: 230 RLVVMEWHGAKGKEKPIAFVGKGVVFDTGGISIKPAANMEDMKGDMGGAAAVTGLMRALA 289

Query: 788 LLKPKKFKAVGLCAYVRN 841
             K  K  A+G+   V N
Sbjct: 290 GRK-AKVNAIGVIGLVEN 306
>sp|Q6MH10|AMPA_BDEBA Probable cytosol aminopeptidase (Leucine aminopeptidase) (LAP)
           (Leucyl aminopeptidase)
          Length = 500

 Score = 55.1 bits (131), Expect = 2e-07
 Identities = 32/80 (40%), Positives = 41/80 (51%)
 Frame = +2

Query: 608 RVVKFEYDSKDQVEETIFLVGKGITYDTGGADVKAGGHMAGMHRDKCGAAAVTGFFKALS 787
           R +  EY      ++ +  VGKG+T+D GG  +K G  M  M  D CG A V G   A++
Sbjct: 244 RFIIMEYKGAAASKKPVCFVGKGLTFDCGGISIKPGAGMEEMKYDMCGGANVIGTLLAIA 303

Query: 788 LLKPKKFKAVGLCAYVRNSI 847
            LK  K  AVGL A   N I
Sbjct: 304 KLK-LKVNAVGLVASTENLI 322
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80,612,465
Number of Sequences: 369166
Number of extensions: 1463704
Number of successful extensions: 3762
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3636
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3746
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8341863645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)