Planaria EST Database


DrC_02968

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_02968
         (859 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9BTX7|CT121_HUMAN  Protein C20orf121                          101   3e-21
sp|Q9D3D0|CT121_MOUSE  Protein C20orf121 homolog                   99   2e-20
sp|P41034|TTPA_RAT  Alpha-tocopherol transfer protein (Alpha...    81   4e-15
sp|Q8BWP5|TTPA_MOUSE  Alpha-tocopherol transfer protein (Alp...    79   2e-14
sp|P49638|TTPA_HUMAN  Alpha-tocopherol transfer protein (Alp...    78   3e-14
sp|P10123|CRAL_BOVIN  Cellular retinaldehyde-binding protein...    72   2e-12
sp|Q9Z275|CRAL_MOUSE  Cellular retinaldehyde-binding protein...    71   3e-12
sp|P12271|CRAL_HUMAN  Cellular retinaldehyde-binding protein...    70   7e-12
sp|Q9UDX3|S144_HUMAN  SEC14-like protein 4 (Tocopherol-assoc...    40   0.011
sp|Q9M0R2|PATL5_ARATH  Patellin-5                                  38   0.041
>sp|Q9BTX7|CT121_HUMAN Protein C20orf121
          Length = 342

 Score =  101 bits (251), Expect = 3e-21
 Identities = 74/226 (32%), Positives = 112/226 (49%), Gaps = 4/226 (1%)
 Frame = +1

Query: 175 ISEHSKAAAIRELNENPLQVNAHIDSFRRWL-KSIPHIKCPTNSKFLLRFLRVSKFNHEK 351
           ++E     A  EL E P      + + R  + K  P++    +  FLLRFLR  KF++++
Sbjct: 35  LTEDLVTKAREELQEKPEWRLRDVQALRDMVRKEYPNLSTSLDDAFLLRFLRARKFDYDR 94

Query: 352 AQNRLDNFCTVRSSTKGSPEFF---KFFSIDDEAVQSFLKLKMHVPLGRNDAGEIVFLIR 522
           A   L N+ + R S    PE F   K  ++ D     FL +  H     +  G  V  IR
Sbjct: 95  ALQLLVNYHSCRRSW---PEVFNNLKPSALKDVLASGFLTVLPHT----DPRGCHVVCIR 147

Query: 523 ASVWDPDKIPLTKLIVLIFMGLDILISEEESQIHGIKILIDLIDISRKSMEAWAEPKLLK 702
              W P   P+T+ I  I++ L+ LI  EE+Q++GI IL D   +S      +  P + K
Sbjct: 148 PDRWIPSNYPITENIRAIYLTLEKLIQSEETQVNGIVILADYKGVSLSKASHFG-PFIAK 206

Query: 703 QWHKIIQESYPIRLKGQIFYNEPMLFDIVFDVISIFMNEKIKNRTF 840
           +   I+Q+ +PIR+K     NEP +F  +F +I  F+ EKI NR F
Sbjct: 207 KVIGILQDGFPIRIKAVHVVNEPRIFKGIFAIIKPFLKEKIANRFF 252
>sp|Q9D3D0|CT121_MOUSE Protein C20orf121 homolog
          Length = 343

 Score = 99.0 bits (245), Expect = 2e-20
 Identities = 72/226 (31%), Positives = 110/226 (48%), Gaps = 4/226 (1%)
 Frame = +1

Query: 175 ISEHSKAAAIRELNENPLQVNAHIDSFRRWL-KSIPHIKCPTNSKFLLRFLRVSKFNHEK 351
           ++E     A  EL E P      + + R  + K  P++    +  FLLRFLR  KF++++
Sbjct: 36  LTEDLVTKAREELQEKPEWRLRDVQALRDMVRKEYPYLSTSLDDAFLLRFLRARKFDYDR 95

Query: 352 AQNRLDNFCTVRSSTKGSPEFFKFF---SIDDEAVQSFLKLKMHVPLGRNDAGEIVFLIR 522
           A   L N+   R S    PE F      ++ D     FL +  H     +  G  V  IR
Sbjct: 96  ALQLLVNYHGCRRSW---PEVFSNLRPSALKDVLNSGFLTVLPHT----DPRGCHVLCIR 148

Query: 523 ASVWDPDKIPLTKLIVLIFMGLDILISEEESQIHGIKILIDLIDISRKSMEAWAEPKLLK 702
              W P   P+T+ I  +++ L+ LI  EE+Q++GI IL D   +S      +  P + K
Sbjct: 149 PDRWIPSNYPITENIRAVYLTLEKLIQSEETQVNGIVILADYKGVSLSKASHFG-PFIAK 207

Query: 703 QWHKIIQESYPIRLKGQIFYNEPMLFDIVFDVISIFMNEKIKNRTF 840
           +   I+Q+ +PIR+K     NEP +F  +F +I  F+ EKI NR F
Sbjct: 208 KVIGILQDGFPIRIKAVHIVNEPRIFKGIFAIIKPFLKEKIANRFF 253
>sp|P41034|TTPA_RAT Alpha-tocopherol transfer protein (Alpha-TTP)
          Length = 278

 Score = 80.9 bits (198), Expect = 4e-15
 Identities = 61/223 (27%), Positives = 101/223 (45%), Gaps = 13/223 (5%)
 Frame = +1

Query: 205 RELNENPLQ---VNAHIDSFRRWLKS--IPHIKCPTNSKFLLRFLRVSKFNHEKAQNRLD 369
           ++LNE P     V   +   RR  +   +P    P    FLLRFLR   F+ + A   + 
Sbjct: 12  KQLNEQPDHSPLVQPGLAELRRRAQEEGVPETPQPLTDAFLLRFLRARDFDLDLAWRLMK 71

Query: 370 NFCTVRSSTKGSPEFFKFFSIDDEAVQSFLKLKMHVPL-GRNDAGEIVFLIRASVWDPDK 546
           N+   R+     PE      +   ++   LK   H  L  R+  G  V + R S WDP  
Sbjct: 72  NYYKWRAEC---PELSA--DLHPRSILGLLKAGYHGVLRSRDPTGSRVLIYRISYWDPKV 126

Query: 547 IPLTKLIVLIFMGLDILISEEESQIHGIKILIDLIDISRKSMEAWA-------EPKLLKQ 705
                +  +  +  ++++ E E+Q +G+K + DL        E W         P + K+
Sbjct: 127 FTAYDVFRVSLITSELIVQEVETQRNGVKAIFDL--------EGWQISHAFQITPSVAKK 178

Query: 706 WHKIIQESYPIRLKGQIFYNEPMLFDIVFDVISIFMNEKIKNR 834
              ++ +S+P++++G    NEP++F  VF +I  F+ EKIK R
Sbjct: 179 IAAVVTDSFPLKVRGIHLINEPVIFHAVFSMIKPFLTEKIKGR 221
>sp|Q8BWP5|TTPA_MOUSE Alpha-tocopherol transfer protein (Alpha-TTP)
          Length = 278

 Score = 78.6 bits (192), Expect = 2e-14
 Identities = 53/195 (27%), Positives = 91/195 (46%), Gaps = 8/195 (4%)
 Frame = +1

Query: 274 IPHIKCPTNSKFLLRFLRVSKFNHEKAQNRLDNFCTVRSSTKGSPEFFKFFSIDDEAVQS 453
           +P    P    FLLRFLR   F+ + A   + N+   R+     PE      +   ++  
Sbjct: 40  VPQTPQPLTDAFLLRFLRARDFDLDLAWRLMKNYYKWRAEC---PELSA--DLRPRSILG 94

Query: 454 FLKLKMHVPL-GRNDAGEIVFLIRASVWDPDKIPLTKLIVLIFMGLDILISEEESQIHGI 630
            LK   H  L  R+  G  V + R + WDP       +  +  +  ++++ E E+Q +G+
Sbjct: 95  LLKAGYHGVLRSRDSTGSRVLIYRIAYWDPKVFTAYDVFRVSLITSELIVQEVETQRNGV 154

Query: 631 KILIDLIDISRKSMEAWA-------EPKLLKQWHKIIQESYPIRLKGQIFYNEPMLFDIV 789
           K + DL        E W         P + K+   ++ +S+P++++G    NEP++F  V
Sbjct: 155 KAIFDL--------EGWQVSHAFQITPSVAKKIAAVLTDSFPLKVRGIHLINEPVIFHAV 206

Query: 790 FDVISIFMNEKIKNR 834
           F +I  F+ EKIK+R
Sbjct: 207 FSMIKPFLTEKIKDR 221
>sp|P49638|TTPA_HUMAN Alpha-tocopherol transfer protein (Alpha-TTP)
          Length = 278

 Score = 78.2 bits (191), Expect = 3e-14
 Identities = 55/195 (28%), Positives = 90/195 (46%), Gaps = 8/195 (4%)
 Frame = +1

Query: 274 IPHIKCPTNSKFLLRFLRVSKFNHEKAQNRLDNFCTVRSSTKGSPEFFKFFSIDDEAVQS 453
           +P    P    FLLRFLR   F+ + A   L N+   R+     PE      +   ++  
Sbjct: 40  VPLAPLPLTDSFLLRFLRARDFDLDLAWRLLKNYYKWRAEC---PEISA--DLHPRSIIG 94

Query: 454 FLKLKMHVPL-GRNDAGEIVFLIRASVWDPDKIPLTKLIVLIFMGLDILISEEESQIHGI 630
            LK   H  L  R+  G  V + R + WDP       +  +  +  ++++ E E+Q +GI
Sbjct: 95  LLKAGYHGVLRSRDPTGSKVLIYRIAHWDPKVFTAYDVFRVSLITSELIVQEVETQRNGI 154

Query: 631 KILIDLIDISRKSMEAWA-------EPKLLKQWHKIIQESYPIRLKGQIFYNEPMLFDIV 789
           K + DL        E W         P + K+   ++ +S+P++++G    NEP++F  V
Sbjct: 155 KAIFDL--------EGWQFSHAFQITPSVAKKIAAVLTDSFPLKVRGIHLINEPVIFHAV 206

Query: 790 FDVISIFMNEKIKNR 834
           F +I  F+ EKIK R
Sbjct: 207 FSMIKPFLTEKIKER 221
>sp|P10123|CRAL_BOVIN Cellular retinaldehyde-binding protein (CRALBP)
          Length = 317

 Score = 72.0 bits (175), Expect = 2e-12
 Identities = 59/221 (26%), Positives = 101/221 (45%), Gaps = 1/221 (0%)
 Frame = +1

Query: 181 EHSKAAAIRELNENPLQVNAHIDSFRRWLKSIPHIKCPTNSKFLLRFLRVSKFNHEKAQN 360
           E ++  A+REL E    V A   S +    ++       +S F LRF+R  KF+  +A  
Sbjct: 56  EETREEAVRELQE---LVQAEAASGQELAVAVAERVQGKDSAFFLRFIRARKFHVGRAYE 112

Query: 361 RLDNFCTVRSSTKGSPEFFKFFSIDDEAVQSFLKLKMHVPLGRNDA-GEIVFLIRASVWD 537
            L  +   R      PE F   S+  EAV+  ++      L   D  G +V L     WD
Sbjct: 113 LLRGYVNFRLQ---YPELFD--SLSPEAVRCTVEAGYPGVLSTRDKYGRVVMLFIIENWD 167

Query: 538 PDKIPLTKLIVLIFMGLDILISEEESQIHGIKILIDLIDISRKSMEAWAEPKLLKQWHKI 717
            ++I   +++    + L+ L+  EE+QI+G  I+ +    + +   A   P  L++   +
Sbjct: 168 SEEITFDEILQAYCVILEKLLENEETQINGFCIIENFKGFTMQ-QAAGLRPSDLRKMVDM 226

Query: 718 IQESYPIRLKGQIFYNEPMLFDIVFDVISIFMNEKIKNRTF 840
           +Q+S+P R K   F  +P  F   ++V+  F+  K+  R F
Sbjct: 227 LQDSFPARFKAIHFIYQPWYFTTTYNVVKPFLKSKLLQRVF 267
>sp|Q9Z275|CRAL_MOUSE Cellular retinaldehyde-binding protein (CRALBP)
          Length = 317

 Score = 71.2 bits (173), Expect = 3e-12
 Identities = 58/221 (26%), Positives = 100/221 (45%), Gaps = 1/221 (0%)
 Frame = +1

Query: 181 EHSKAAAIRELNENPLQVNAHIDSFRRWLKSIPHIKCPTNSKFLLRFLRVSKFNHEKAQN 360
           E ++  A+REL E    V A   S      ++       +S FLLRF+R  KF+  +A  
Sbjct: 56  EETREEAVRELQE---LVQAQAASGEELALAVAERVQARDSAFLLRFIRARKFDVGRAYE 112

Query: 361 RLDNFCTVRSSTKGSPEFFKFFSIDDEAVQSFLKLKMHVPLGRNDA-GEIVFLIRASVWD 537
            L  +   R      PE F   S+  EA++  ++      L   D  G +V L     W 
Sbjct: 113 LLKGYVNFRLQ---YPELFD--SLSMEALRCTIEAGYPGVLSSRDKYGRVVMLFNIENWH 167

Query: 538 PDKIPLTKLIVLIFMGLDILISEEESQIHGIKILIDLIDISRKSMEAWAEPKLLKQWHKI 717
            +++   +++      L+ L+  EE+QI+G  I+ +    + +   A   P  LK+   +
Sbjct: 168 CEEVTFDEILQAYCFILEKLLENEETQINGFCIVENFKGFTMQ-QAAGLRPSDLKKMVDM 226

Query: 718 IQESYPIRLKGQIFYNEPMLFDIVFDVISIFMNEKIKNRTF 840
           +Q+S+P R K   F ++P  F   ++V+  F+  K+  R F
Sbjct: 227 LQDSFPARFKAIHFIHQPWYFTTTYNVVKPFLKNKLLQRVF 267
>sp|P12271|CRAL_HUMAN Cellular retinaldehyde-binding protein (CRALBP)
          Length = 317

 Score = 70.1 bits (170), Expect = 7e-12
 Identities = 58/221 (26%), Positives = 97/221 (43%), Gaps = 1/221 (0%)
 Frame = +1

Query: 181 EHSKAAAIRELNENPLQVNAHIDSFRRWLKSIPHIKCPTNSKFLLRFLRVSKFNHEKAQN 360
           E ++  A+REL E    V A   S      ++       +S F LRF+R  KFN  +A  
Sbjct: 56  EETREEAVRELQE---MVQAQAASGEELAVAVAERVQEKDSGFFLRFIRARKFNVGRAYE 112

Query: 361 RLDNFCTVRSSTKGSPEFFKFFSIDDEAVQSFLKLKMHVPLGRNDA-GEIVFLIRASVWD 537
            L  +   R      PE F   S+  EAV+  ++      L   D  G +V L     W 
Sbjct: 113 LLRGYVNFRLQ---YPELFD--SLSPEAVRCTIEAGYPGVLSSRDKYGRVVMLFNIENWQ 167

Query: 538 PDKIPLTKLIVLIFMGLDILISEEESQIHGIKILIDLIDISRKSMEAWAEPKLLKQWHKI 717
             +I   +++      L+ L+  EE+QI+G  I+ +    + +   A      L++   +
Sbjct: 168 SQEITFDEILQAYCFILEKLLENEETQINGFCIIENFKGFTMQ-QAASLRTSDLRKMVDM 226

Query: 718 IQESYPIRLKGQIFYNEPMLFDIVFDVISIFMNEKIKNRTF 840
           +Q+S+P R K   F ++P  F   ++V+  F+  K+  R F
Sbjct: 227 LQDSFPARFKAIHFIHQPWYFTTTYNVVKPFLKSKLLERVF 267
>sp|Q9UDX3|S144_HUMAN SEC14-like protein 4 (Tocopherol-associated protein 3)
          Length = 406

 Score = 39.7 bits (91), Expect = 0.011
 Identities = 46/208 (22%), Positives = 90/208 (43%), Gaps = 14/208 (6%)
 Frame = +1

Query: 253 FRRWLKSIPHIKCPTNSKFLLRFLRVSKFNHEKAQNRLDNFCTVRSS-------TKGSPE 411
           FR  L+ +  I    +  FLLR+LR   F+ +K+++ L      R         T   PE
Sbjct: 19  FRENLQDLLPILPNADDYFLLRWLRARNFDLQKSEDMLRRHMEFRKQQDLDNIVTWQPPE 78

Query: 412 FFKFFS------IDDEAVQSFLKLKMHVPLGRNDAGEIVFLIRASVWDPDKIPLTKLIVL 573
             + +        D E    +  +     +G  D   +  L+ AS  D  +  + K+  L
Sbjct: 79  VIQLYDSGGLCGYDYEGCPVYFNI-----IGSLDPKGL--LLSASKQDMIRKRI-KVCEL 130

Query: 574 IFMGLDILISEEESQIHGIKILIDLIDISRKSMEAWAEP-KLLKQWHKIIQESYPIRLKG 750
           +    ++   +   +I    ++ D+  +S K +  W    ++ +Q+  I++ +YP  LK 
Sbjct: 131 LLHECELQTQKLGRKIEMALMVFDMEGLSLKHL--WKPAVEVYQQFFSILEANYPETLKN 188

Query: 751 QIFYNEPMLFDIVFDVISIFMNEKIKNR 834
            I    P LF + F+++  FM+E+ + +
Sbjct: 189 LIVIRAPKLFPVAFNLVKSFMSEETRRK 216
>sp|Q9M0R2|PATL5_ARATH Patellin-5
          Length = 668

 Score = 37.7 bits (86), Expect = 0.041
 Identities = 50/225 (22%), Positives = 91/225 (40%), Gaps = 7/225 (3%)
 Frame = +1

Query: 181 EHSKAAAIRELNENPLQVNAHI-----DSFRRWLKSIPHIKCPTNSKFLLRFLRVSKFNH 345
           E +K + + E   N LQ   H+     DS +  +  +P +K       LL+FLR   F  
Sbjct: 294 ETNKISDLSETELNALQELRHLLQVSQDSSKTSIWGVPLLKDDRTDVVLLKFLRARDFKP 353

Query: 346 EKAQNRLDNFCTVRSSTKGSPEFFKFFSID-DEAVQSFLKLKMHVPLGRNDAGEIVFLIR 522
           ++A + L+     R          +    D D+ V    + K + P+  N  GE      
Sbjct: 354 QEAYSMLNKTLQWRIDFNIEELLDENLGDDLDKVVFMQGQDKENHPVCYNVYGEFQNKDL 413

Query: 523 ASVWDPDKIPLTKLIVLIFMGLDILISEEESQIHGIKILIDLIDISRKSMEAWAEPKLL- 699
                 D+    + +      L+  I   +    G+  +  + D+         E +L  
Sbjct: 414 YQKTFSDEEKRERFLRWRIQFLEKSIRNLDFVAGGVSTICQVNDLKNSPGPGKTELRLAT 473

Query: 700 KQWHKIIQESYPIRLKGQIFYNEPMLFDIVFDVISIFMNEKIKNR 834
           KQ   ++Q++YP  +  QIF N P  +   + +IS FM+++ K++
Sbjct: 474 KQALHLLQDNYPEFVSKQIFINVPWWYLAFYRIISPFMSQRSKSK 518
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 85,516,221
Number of Sequences: 369166
Number of extensions: 1580548
Number of successful extensions: 3557
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3474
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3547
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8486520240
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)