Planaria EST Database


DrC_02961

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_02961
         (569 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P49096|CYB5_MUSDO  Cytochrome b5 (CYTB5)                       115   1e-25
sp|P00173|CYB5_RAT  Cytochrome b5                                 114   2e-25
sp|P56395|CYB5_MOUSE  Cytochrome b5                               114   2e-25
sp|Q9V4N3|CYB5_DROME  Cytochrome b5 (CYTB5)                       113   3e-25
sp|P00169|CYB5_RABIT  Cytochrome b5                               112   5e-25
sp|P00167|CYB5_HUMAN  Cytochrome b5                               112   5e-25
sp|P00172|CYB5_PIG  Cytochrome b5                                 109   5e-24
sp|P00170|CYB5_HORSE  Cytochrome b5                               108   7e-24
sp|P00168|CYB5_ALOSE  Cytochrome b5                               107   2e-23
sp|P00174|CYB5_CHICK  Cytochrome b5                               107   2e-23
>sp|P49096|CYB5_MUSDO Cytochrome b5 (CYTB5)
          Length = 134

 Score =  115 bits (287), Expect = 1e-25
 Identities = 55/103 (53%), Positives = 73/103 (70%), Gaps = 3/103 (2%)
 Frame = +1

Query: 4   FTLAEVKEHSSNESCWVVIHDEVYDVTKFLEEHPGGEEVLMEQSGNHATEAFEDVGHSSD 183
           FT AEV ++++ +  W +IH+ VYDVT FL EHPGGEEVL+EQ+G  ATE FEDVGHSSD
Sbjct: 9   FTRAEVAKNNTKDKNWFIIHNNVYDVTAFLNEHPGGEEVLIEQAGKDATEHFEDVGHSSD 68

Query: 184 ARELMKQYKIGRIANEDKEN---RNRFTSTVTPEDGENSSSSW 303
           ARE+MKQYK+G +  E++ N   ++  T     +  E+S  SW
Sbjct: 69  AREMMKQYKVGELVAEERSNVPEKSEPTWNTEQKTEESSMKSW 111
>sp|P00173|CYB5_RAT Cytochrome b5
          Length = 134

 Score =  114 bits (284), Expect = 2e-25
 Identities = 56/121 (46%), Positives = 79/121 (65%)
 Frame = +1

Query: 4   FTLAEVKEHSSNESCWVVIHDEVYDVTKFLEEHPGGEEVLMEQSGNHATEAFEDVGHSSD 183
           +TL E+++H  ++S WV++H +VYD+TKFLEEHPGGEEVL EQ+G  ATE FEDVGHS+D
Sbjct: 12  YTLEEIQKHKDSKSTWVILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTD 71

Query: 184 ARELMKQYKIGRIANEDKENRNRFTSTVTPEDGENSSSSWSGXXXXXXXXXXXXXXYKLF 363
           AREL K Y IG +  +D+    + + T+     E++SS W+               Y+L+
Sbjct: 72  ARELSKTYIIGELHPDDRSKIAKPSETLI-TTVESNSSWWTNWVIPAISALVVALMYRLY 130

Query: 364 M 366
           M
Sbjct: 131 M 131
>sp|P56395|CYB5_MOUSE Cytochrome b5
          Length = 134

 Score =  114 bits (284), Expect = 2e-25
 Identities = 56/121 (46%), Positives = 79/121 (65%)
 Frame = +1

Query: 4   FTLAEVKEHSSNESCWVVIHDEVYDVTKFLEEHPGGEEVLMEQSGNHATEAFEDVGHSSD 183
           +TL E+++H  ++S WV++H +VYD+TKFLEEHPGGEEVL EQ+G  ATE FEDVGHS+D
Sbjct: 12  YTLEEIQKHKDSKSTWVILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTD 71

Query: 184 ARELMKQYKIGRIANEDKENRNRFTSTVTPEDGENSSSSWSGXXXXXXXXXXXXXXYKLF 363
           AREL K Y IG +  +D+    + + T+     E++SS W+               Y+L+
Sbjct: 72  ARELSKTYIIGELHPDDRSKIAKPSDTLI-TTVESNSSWWTNWVIPAISALAVALMYRLY 130

Query: 364 M 366
           M
Sbjct: 131 M 131
>sp|Q9V4N3|CYB5_DROME Cytochrome b5 (CYTB5)
          Length = 134

 Score =  113 bits (283), Expect = 3e-25
 Identities = 52/103 (50%), Positives = 75/103 (72%), Gaps = 3/103 (2%)
 Frame = +1

Query: 4   FTLAEVKEHSSNESCWVVIHDEVYDVTKFLEEHPGGEEVLMEQSGNHATEAFEDVGHSSD 183
           FT AEV +H++N+  W++IH+ +YDVT FL EHPGGEEVL+EQ+G  ATE FEDVGHS+D
Sbjct: 9   FTRAEVAKHNTNKDTWLLIHNNIYDVTAFLNEHPGGEEVLIEQAGKDATENFEDVGHSND 68

Query: 184 ARELMKQYKIGRIANEDKEN---RNRFTSTVTPEDGENSSSSW 303
           AR++MK+YKIG +   ++ +   ++  T +   +  E+S  SW
Sbjct: 69  ARDMMKKYKIGELVESERTSVAQKSEPTWSTEQQTEESSVKSW 111
>sp|P00169|CYB5_RABIT Cytochrome b5
          Length = 134

 Score =  112 bits (281), Expect = 5e-25
 Identities = 56/122 (45%), Positives = 81/122 (66%), Gaps = 1/122 (0%)
 Frame = +1

Query: 4   FTLAEVKEHSSNESCWVVIHDEVYDVTKFLEEHPGGEEVLMEQSGNHATEAFEDVGHSSD 183
           +TL E+K+H+ ++S W+++H +VYD+TKFLEEHPGGEEVL EQ+G  ATE FEDVGHS+D
Sbjct: 12  YTLEEIKKHNHSKSTWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTD 71

Query: 184 ARELMKQYKIGRIANEDKENRNRFTST-VTPEDGENSSSSWSGXXXXXXXXXXXXXXYKL 360
           AREL K + IG +  +D+   ++   T +T  D  ++SS W+               Y+L
Sbjct: 72  ARELSKTFIIGELHPDDRSKLSKPMETLITTVD--SNSSWWTNWVIPAISALIVALMYRL 129

Query: 361 FM 366
           +M
Sbjct: 130 YM 131
>sp|P00167|CYB5_HUMAN Cytochrome b5
          Length = 134

 Score =  112 bits (281), Expect = 5e-25
 Identities = 54/121 (44%), Positives = 80/121 (66%)
 Frame = +1

Query: 4   FTLAEVKEHSSNESCWVVIHDEVYDVTKFLEEHPGGEEVLMEQSGNHATEAFEDVGHSSD 183
           +TL E+++H+ ++S W+++H +VYD+TKFLEEHPGGEEVL EQ+G  ATE FEDVGHS+D
Sbjct: 12  YTLEEIQKHNHSKSTWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTD 71

Query: 184 ARELMKQYKIGRIANEDKENRNRFTSTVTPEDGENSSSSWSGXXXXXXXXXXXXXXYKLF 363
           ARE+ K + IG +  +D+   N+   T+     ++SSS W+               Y+L+
Sbjct: 72  AREMSKTFIIGELHPDDRPKLNKPPETLITTI-DSSSSWWTNWVIPAISAVAVALMYRLY 130

Query: 364 M 366
           M
Sbjct: 131 M 131
>sp|P00172|CYB5_PIG Cytochrome b5
          Length = 134

 Score =  109 bits (272), Expect = 5e-24
 Identities = 50/97 (51%), Positives = 72/97 (74%)
 Frame = +1

Query: 4   FTLAEVKEHSSNESCWVVIHDEVYDVTKFLEEHPGGEEVLMEQSGNHATEAFEDVGHSSD 183
           +TL E+++H++++S W+++H +VYD+TKFLEEHPGGEEVL EQ+G  ATE FEDVGHS+D
Sbjct: 12  YTLEEIQKHNNSKSTWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDATENFEDVGHSTD 71

Query: 184 ARELMKQYKIGRIANEDKENRNRFTSTVTPEDGENSS 294
           AREL K + IG +  +D+    + + T+      NSS
Sbjct: 72  ARELSKTFIIGELHPDDRSKIAKPSETLITTVESNSS 108
>sp|P00170|CYB5_HORSE Cytochrome b5
          Length = 134

 Score =  108 bits (271), Expect = 7e-24
 Identities = 52/101 (51%), Positives = 74/101 (73%), Gaps = 1/101 (0%)
 Frame = +1

Query: 4   FTLAEVKEHSSNESCWVVIHDEVYDVTKFLEEHPGGEEVLMEQSGNHATEAFEDVGHSSD 183
           +TL E+K+H+ ++S W+++H +VYD+TKFLE+HPGGEEVL EQ+G  ATE FED+GHS+D
Sbjct: 12  YTLEEIKKHNHSKSTWLILHHKVYDLTKFLEDHPGGEEVLREQAGGDATENFEDIGHSTD 71

Query: 184 ARELMKQYKIGRIANEDKENRNRFTST-VTPEDGENSSSSW 303
           AREL K + IG +  +D+    +   T +T  D   S+SSW
Sbjct: 72  ARELSKTFIIGELHPDDRSKIAKPVETLITTVD---SNSSW 109
>sp|P00168|CYB5_ALOSE Cytochrome b5
          Length = 87

 Score =  107 bits (268), Expect = 2e-23
 Identities = 47/78 (60%), Positives = 64/78 (82%)
 Frame = +1

Query: 4   FTLAEVKEHSSNESCWVVIHDEVYDVTKFLEEHPGGEEVLMEQSGNHATEAFEDVGHSSD 183
           +TL E+++H+ ++S W+++H +VYD+TKFLEEHPGGEEVL EQ+G  ATE FEDVGHS+D
Sbjct: 8   YTLEEIQKHNHSKSTWLILHHKVYDLTKFLEEHPGGEEVLREQAGGDATEDFEDVGHSTD 67

Query: 184 ARELMKQYKIGRIANEDK 237
           AREL K Y IG +  +D+
Sbjct: 68  ARELSKTYIIGELHPDDR 85
>sp|P00174|CYB5_CHICK Cytochrome b5
          Length = 138

 Score =  107 bits (267), Expect = 2e-23
 Identities = 50/121 (41%), Positives = 77/121 (63%)
 Frame = +1

Query: 4   FTLAEVKEHSSNESCWVVIHDEVYDVTKFLEEHPGGEEVLMEQSGNHATEAFEDVGHSSD 183
           + L EV++H++++S W+++H  +YD+TKFL+EHPGGEEVL EQ+G  ATE FEDVGHS+D
Sbjct: 17  YRLEEVQKHNNSQSTWIIVHHRIYDITKFLDEHPGGEEVLREQAGGDATENFEDVGHSTD 76

Query: 184 ARELMKQYKIGRIANEDKENRNRFTSTVTPEDGENSSSSWSGXXXXXXXXXXXXXXYKLF 363
           AR L + + IG +  +D+    +   T+     +++SSSWS               Y+ +
Sbjct: 77  ARALSETFIIGELHPDDRPKLQKPAETLI-TTVQSNSSSWSNWVIPAIAAIIVALMYRSY 135

Query: 364 M 366
           M
Sbjct: 136 M 136
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,429,437
Number of Sequences: 369166
Number of extensions: 926788
Number of successful extensions: 2613
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2513
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2581
length of database: 68,354,980
effective HSP length: 104
effective length of database: 49,142,540
effective search space used: 4177115900
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)