Planaria EST Database


DrC_02936

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_02936
         (687 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P31153|METK_HUMAN  S-adenosylmethionine synthetase gamma ...   232   8e-61
sp|P18298|METK_RAT  S-adenosylmethionine synthetase gamma fo...   230   2e-60
sp|Q00266|METL_HUMAN  S-adenosylmethionine synthetase alpha ...   229   5e-60
sp|P13444|METL_RAT  S-adenosylmethionine synthetase alpha an...   226   6e-59
sp|P40320|METK_DROME  S-adenosylmethionine synthetase (Methi...   208   1e-53
sp|P19358|METL_YEAST  S-adenosylmethionine synthetase 2 (Met...   206   4e-53
sp|P50306|METL_CAEEL  Probable S-adenosylmethionine syntheta...   205   8e-53
sp|P50305|METK_CAEEL  Probable S-adenosylmethionine syntheta...   205   1e-52
sp|P48466|METK_NEUCR  S-adenosylmethionine synthetase (Methi...   204   2e-52
sp|P10659|METK_YEAST  S-adenosylmethionine synthetase 1 (Met...   203   4e-52
>sp|P31153|METK_HUMAN S-adenosylmethionine synthetase gamma form (Methionine
           adenosyltransferase) (AdoMet synthetase) (MAT-II)
          Length = 395

 Score =  232 bits (591), Expect = 8e-61
 Identities = 116/174 (66%), Positives = 130/174 (74%)
 Frame = +1

Query: 7   LLSDVIRKVIPDHYLDDDTIYHLNPSGRFVIGGPQGDAGLTGRKIIVDTYXXXXXXXXXX 186
           L   VI+ V+P  YLD+DTIYHL PSGRFVIGGPQGDAGLTGRKIIVDTY          
Sbjct: 222 LKEKVIKAVVPAKYLDEDTIYHLQPSGRFVIGGPQGDAGLTGRKIIVDTYGGWGAHGGGA 281

Query: 187 XXXKDFSKVDRSAAYAARWVAKSLVKANLCRRVLVQVSYAIGISHPLSIXXXXXXXXXXX 366
              KD++KVDRSAAYAARWVAKSLVK  LCRRVLVQVSYAIG+SHPLSI           
Sbjct: 282 FSGKDYTKVDRSAAYAARWVAKSLVKGGLCRRVLVQVSYAIGVSHPLSISIFHYGTSQKS 341

Query: 367 XXXLLQIVVANFDLRPGHIVKELNLRHPIYKKTACYGHFGRDEFSWEKPKKLKF 528
              LL+IV  NFDLRPG IV++L+L+ PIY++TA YGHFGRD F WE PKKLK+
Sbjct: 342 ERELLEIVKKNFDLRPGVIVRDLDLKKPIYQRTAAYGHFGRDSFPWEVPKKLKY 395
>sp|P18298|METK_RAT S-adenosylmethionine synthetase gamma form (Methionine
           adenosyltransferase) (AdoMet synthetase) (MAT-II)
          Length = 395

 Score =  230 bits (587), Expect = 2e-60
 Identities = 115/174 (66%), Positives = 130/174 (74%)
 Frame = +1

Query: 7   LLSDVIRKVIPDHYLDDDTIYHLNPSGRFVIGGPQGDAGLTGRKIIVDTYXXXXXXXXXX 186
           L   +I+ V+P  YLD+DTIYHL PSGRFVIGGPQGDAGLTGRKIIVDTY          
Sbjct: 222 LKEKLIKAVVPAKYLDEDTIYHLQPSGRFVIGGPQGDAGLTGRKIIVDTYGGWGAHGGGA 281

Query: 187 XXXKDFSKVDRSAAYAARWVAKSLVKANLCRRVLVQVSYAIGISHPLSIXXXXXXXXXXX 366
              KD++KVDRSAAYAARWVAKSLVK  LCRRVLVQVSYAIG+SHPLSI           
Sbjct: 282 FSGKDYTKVDRSAAYAARWVAKSLVKGGLCRRVLVQVSYAIGVSHPLSISIFHYGTSQKS 341

Query: 367 XXXLLQIVVANFDLRPGHIVKELNLRHPIYKKTACYGHFGRDEFSWEKPKKLKF 528
              LL+IV  NFDLRPG IV++L+L+ PIY++TA YGHFGRD F WE PKKLK+
Sbjct: 342 ERELLEIVKNNFDLRPGVIVRDLDLKKPIYQRTAAYGHFGRDSFPWEVPKKLKY 395
>sp|Q00266|METL_HUMAN S-adenosylmethionine synthetase alpha and beta forms (Methionine
           adenosyltransferase) (AdoMet synthetase) (MAT-I/III)
          Length = 395

 Score =  229 bits (584), Expect = 5e-60
 Identities = 114/174 (65%), Positives = 129/174 (74%)
 Frame = +1

Query: 7   LLSDVIRKVIPDHYLDDDTIYHLNPSGRFVIGGPQGDAGLTGRKIIVDTYXXXXXXXXXX 186
           L   VIR V+P  YLD+DT+YHL PSGRFVIGGPQGDAG+TGRKIIVDTY          
Sbjct: 222 LKEQVIRAVVPAKYLDEDTVYHLQPSGRFVIGGPQGDAGVTGRKIIVDTYGGWGAHGGGA 281

Query: 187 XXXKDFSKVDRSAAYAARWVAKSLVKANLCRRVLVQVSYAIGISHPLSIXXXXXXXXXXX 366
              KD++KVDRSAAYAARWVAKSLVKA LCRRVLVQVSYAIG++ PLSI           
Sbjct: 282 FSGKDYTKVDRSAAYAARWVAKSLVKAGLCRRVLVQVSYAIGVAEPLSISIFTYGTSQKT 341

Query: 367 XXXLLQIVVANFDLRPGHIVKELNLRHPIYKKTACYGHFGRDEFSWEKPKKLKF 528
              LL +V  NFDLRPG IV++L+L+ PIY+KTACYGHFGR EF WE P+KL F
Sbjct: 342 ERELLDVVHKNFDLRPGVIVRDLDLKKPIYQKTACYGHFGRSEFPWEVPRKLVF 395
>sp|P13444|METL_RAT S-adenosylmethionine synthetase alpha and beta forms (Methionine
           adenosyltransferase) (AdoMet synthetase) (MAT-I/III)
          Length = 397

 Score =  226 bits (575), Expect = 6e-59
 Identities = 115/175 (65%), Positives = 130/175 (74%), Gaps = 1/175 (0%)
 Frame = +1

Query: 7   LLSDVIRKVIPDHYLDDDTIYHLNPSGRFVIGGPQGDAGLTGRKIIVDTYXXXXXXXXXX 186
           L   VI+ V+P  YLD+DTIYHL PSGRFVIGGPQGDAG+TGRKIIVDTY          
Sbjct: 223 LKEQVIKAVVPAKYLDEDTIYHLQPSGRFVIGGPQGDAGVTGRKIIVDTYGGWGAHGGGA 282

Query: 187 XXXKDFSKVDRSAAYAARWVAKSLVKANLCRRVLVQVSYAIGISHPLSI-XXXXXXXXXX 363
              KD++KVDRSAAYAARWVAKSLVKA LCRRVLVQVSYAIG++ PLSI           
Sbjct: 283 FSGKDYTKVDRSAAYAARWVAKSLVKAGLCRRVLVQVSYAIGVAEPLSISIFTYGTSKKT 342

Query: 364 XXXXLLQIVVANFDLRPGHIVKELNLRHPIYKKTACYGHFGRDEFSWEKPKKLKF 528
               LL++V  NFDLRPG IV++L+L+ PIY+KTACYGHFGR EF WE PKKL F
Sbjct: 343 ERDELLEVVNKNFDLRPGVIVRDLDLKKPIYQKTACYGHFGRSEFPWEVPKKLVF 397
>sp|P40320|METK_DROME S-adenosylmethionine synthetase (Methionine adenosyltransferase)
           (AdoMet synthetase)
          Length = 408

 Score =  208 bits (529), Expect = 1e-53
 Identities = 105/173 (60%), Positives = 123/173 (71%)
 Frame = +1

Query: 7   LLSDVIRKVIPDHYLDDDTIYHLNPSGRFVIGGPQGDAGLTGRKIIVDTYXXXXXXXXXX 186
           ++  V++ VIP  Y+D +TI H+NP G FVIGGP GDAGLTGRKIIVDTY          
Sbjct: 233 VMEKVVKVVIPAKYIDANTIVHINPCGLFVIGGPMGDAGLTGRKIIVDTYGGWGAHGGGA 292

Query: 187 XXXKDFSKVDRSAAYAARWVAKSLVKANLCRRVLVQVSYAIGISHPLSIXXXXXXXXXXX 366
              KDF+KVDRSAAYAARWVAKSLVKA LC+R LVQVSYAIG++ PLSI           
Sbjct: 293 FSGKDFTKVDRSAAYAARWVAKSLVKAGLCKRCLVQVSYAIGLAEPLSITVFDYGTSHKS 352

Query: 367 XXXLLQIVVANFDLRPGHIVKELNLRHPIYKKTACYGHFGRDEFSWEKPKKLK 525
              LL I+  NFDLRPG IVK+LNLR PIY++T+ YGHFGR  FSWE+ K L+
Sbjct: 353 QKELLDIIRRNFDLRPGKIVKDLNLRQPIYQRTSTYGHFGRAGFSWEEAKPLE 405
>sp|P19358|METL_YEAST S-adenosylmethionine synthetase 2 (Methionine adenosyltransferase
           2) (AdoMet synthetase 2)
          Length = 384

 Score =  206 bits (525), Expect = 4e-53
 Identities = 104/174 (59%), Positives = 121/174 (69%)
 Frame = +1

Query: 7   LLSDVIRKVIPDHYLDDDTIYHLNPSGRFVIGGPQGDAGLTGRKIIVDTYXXXXXXXXXX 186
           L  D++ KVIP   LD++T Y + PSGRFVIGGPQGDAGLTGRKIIVD Y          
Sbjct: 211 LQKDIVEKVIPKDMLDENTKYFIQPSGRFVIGGPQGDAGLTGRKIIVDAYGGASSVGGGA 270

Query: 187 XXXKDFSKVDRSAAYAARWVAKSLVKANLCRRVLVQVSYAIGISHPLSIXXXXXXXXXXX 366
              KD+SKVDRSAAYAARWVAKSLV A LC+RV VQ SYAIGI+ PLS+           
Sbjct: 271 FSGKDYSKVDRSAAYAARWVAKSLVAAGLCKRVQVQFSYAIGIAEPLSLHVDTYGTATKS 330

Query: 367 XXXLLQIVVANFDLRPGHIVKELNLRHPIYKKTACYGHFGRDEFSWEKPKKLKF 528
              +++I+  NFDLRPG +VKEL+L  PIY  TA YGHF   E+SWEKPKKL+F
Sbjct: 331 DDEIIEIIKKNFDLRPGVLVKELDLARPIYLPTASYGHFTNQEYSWEKPKKLEF 384
>sp|P50306|METL_CAEEL Probable S-adenosylmethionine synthetase C06E7.3 (Methionine
           adenosyltransferase) (AdoMet synthetase)
          Length = 404

 Score =  205 bits (522), Expect = 8e-53
 Identities = 105/175 (60%), Positives = 121/175 (69%)
 Frame = +1

Query: 1   KHLLSDVIRKVIPDHYLDDDTIYHLNPSGRFVIGGPQGDAGLTGRKIIVDTYXXXXXXXX 180
           K L+  VI+ VIP + +DD TIYHLNP G F+IGGP GDAGLTGRKIIVDTY        
Sbjct: 208 KELIEKVIKAVIPANLIDDKTIYHLNPCGSFIIGGPMGDAGLTGRKIIVDTYGGWGAHGG 267

Query: 181 XXXXXKDFSKVDRSAAYAARWVAKSLVKANLCRRVLVQVSYAIGISHPLSIXXXXXXXXX 360
                KD +KVDRSAAYAARWVAKSLVKA LCRR LVQVSYAIG++ PLS+         
Sbjct: 268 GAFSGKDPTKVDRSAAYAARWVAKSLVKAGLCRRCLVQVSYAIGVAKPLSVMVFSFGTSA 327

Query: 361 XXXXXLLQIVVANFDLRPGHIVKELNLRHPIYKKTACYGHFGRDEFSWEKPKKLK 525
                LL IV  NFDLRPG I+K L+L+ PIY+ TA  GHFG + F WE+P+ LK
Sbjct: 328 LSEEDLLTIVNDNFDLRPGKIIKNLDLKRPIYEPTAENGHFGHNNFPWEQPRNLK 382
>sp|P50305|METK_CAEEL Probable S-adenosylmethionine synthetase C06E7.1 (Methionine
           adenosyltransferase) (AdoMet synthetase)
          Length = 404

 Score =  205 bits (521), Expect = 1e-52
 Identities = 104/175 (59%), Positives = 124/175 (70%)
 Frame = +1

Query: 1   KHLLSDVIRKVIPDHYLDDDTIYHLNPSGRFVIGGPQGDAGLTGRKIIVDTYXXXXXXXX 180
           K L+  VI+ VIP + +DD TIYHLNP G F+IGGP GDAGLTGRKIIVDTY        
Sbjct: 208 KELIEKVIKAVIPANLIDDKTIYHLNPCGSFIIGGPMGDAGLTGRKIIVDTYGGWGAHGG 267

Query: 181 XXXXXKDFSKVDRSAAYAARWVAKSLVKANLCRRVLVQVSYAIGISHPLSIXXXXXXXXX 360
                KD +KVDRSAAYAARWVAKSLVK+ LCRR LVQVSYAIG++ PLS+         
Sbjct: 268 GAFSGKDPTKVDRSAAYAARWVAKSLVKSGLCRRCLVQVSYAIGVAKPLSVMVFSFGTSA 327

Query: 361 XXXXXLLQIVVANFDLRPGHIVKELNLRHPIYKKTACYGHFGRDEFSWEKPKKLK 525
                LL+IV  NFDLRPG I+K+L+L+ PIY+ TA  GHFG +EF WE+P+ L+
Sbjct: 328 LNEGELLKIVNDNFDLRPGMIIKDLDLKKPIYEPTAENGHFGHNEFPWEQPRHLQ 382
>sp|P48466|METK_NEUCR S-adenosylmethionine synthetase (Methionine adenosyltransferase)
           (AdoMet synthetase)
          Length = 395

 Score =  204 bits (519), Expect = 2e-52
 Identities = 106/177 (59%), Positives = 122/177 (68%), Gaps = 1/177 (0%)
 Frame = +1

Query: 1   KHLLSDVIRKVIPDHYLDDDTIYHLNPSGRFVIGGPQGDAGLTGRKIIVDTYXXXXXXXX 180
           K +L  +I+  IP  YLD+ T+YH+ PSG FVIGGPQGDAGLTGRKIIVDTY        
Sbjct: 219 KEILEKIIKTTIPAKYLDEKTVYHIQPSGLFVIGGPQGDAGLTGRKIIVDTYGGWGAHGG 278

Query: 181 XXXXXKDFSKVDRSAAYAARWVAKSLVKANLCRRVLVQVSYAIGISHPLSIXXXXXXXXX 360
                KDFSKVDRSAAY  RW+AKSLV A L RR LVQ+SYAIG++ PLSI         
Sbjct: 279 GAFSGKDFSKVDRSAAYVGRWIAKSLVAAGLARRALVQLSYAIGVAEPLSIYVDTYGTSD 338

Query: 361 XXXXXLLQIVVANFDLRPGHIVKELNLRHPIYKKTACYGHFGRDE-FSWEKPKKLKF 528
                L+QI+  NFDLRPG IVKEL+L  PIY +TA  GHFG ++ FSWEKPK LKF
Sbjct: 339 KTSEELVQIIRNNFDLRPGVIVKELDLAKPIYLQTAKNGHFGTNQSFSWEKPKALKF 395
>sp|P10659|METK_YEAST S-adenosylmethionine synthetase 1 (Methionine adenosyltransferase
           1) (AdoMet synthetase 1)
          Length = 382

 Score =  203 bits (516), Expect = 4e-52
 Identities = 104/174 (59%), Positives = 119/174 (68%)
 Frame = +1

Query: 7   LLSDVIRKVIPDHYLDDDTIYHLNPSGRFVIGGPQGDAGLTGRKIIVDTYXXXXXXXXXX 186
           L S++I KVIP   LD++T Y + PSGRFVIGGPQGDAGLTGRKIIVD Y          
Sbjct: 209 LKSEIIEKVIPRDMLDENTKYFIQPSGRFVIGGPQGDAGLTGRKIIVDAYGGASSVGGGA 268

Query: 187 XXXKDFSKVDRSAAYAARWVAKSLVKANLCRRVLVQVSYAIGISHPLSIXXXXXXXXXXX 366
              KD+SKVDRSAAYAARWVAKSLV A LC+RV VQ SYAIGI+ PLS+           
Sbjct: 269 FSGKDYSKVDRSAAYAARWVAKSLVAAGLCKRVQVQFSYAIGIAEPLSLHVDTYGTATKS 328

Query: 367 XXXLLQIVVANFDLRPGHIVKELNLRHPIYKKTACYGHFGRDEFSWEKPKKLKF 528
              ++ I+  NFDLRPG +VKEL+L  PIY  TA YGHF   E+ WEKPK LKF
Sbjct: 329 DEEIIDIISKNFDLRPGVLVKELDLARPIYLPTASYGHFTNQEYPWEKPKTLKF 382
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72,877,784
Number of Sequences: 369166
Number of extensions: 1375977
Number of successful extensions: 3462
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3220
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3378
length of database: 68,354,980
effective HSP length: 107
effective length of database: 48,588,335
effective search space used: 5879188535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)