Planaria EST Database


DrC_02935

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_02935
         (853 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q02094|RHAG_HUMAN  Rhesus blood group-associated glycopro...   265   2e-70
sp|Q28446|RHL_HYLPI  RH-like protein (Rhesus-like protein)        154   2e-37
sp|Q28849|RHL_MACMU  RH-like protein (Rhesus-like protein)        148   2e-35
sp|Q28481|RHL_MACFA  RH-like protein (Rhesus-like protein)        148   2e-35
sp|Q28426|RHLC_GORGO  RH-like protein IC (Rhesus-like protei...   140   4e-33
sp|Q28427|RHLD_GORGO  RH-like protein ID (Rhesus-like protei...   133   5e-31
sp|Q28814|RHLR_PANTR  RH-like protein IIR (Rhesus-like prote...   132   9e-31
sp|Q28813|RHLA_PANTR  RH-like protein IA (Rhesus-like protei...   132   9e-31
sp|Q28812|RHLF_PANTR  RH-like protein IIF (Rhesus-like prote...   132   2e-30
sp|Q02161|RHD_HUMAN  Blood group Rh(D) polypeptide (Rhesus D...   129   1e-29
>sp|Q02094|RHAG_HUMAN Rhesus blood group-associated glycoprotein (Rhesus blood
           group-associated ammonia channel) (Erythrocyte plasma
           membrane 50 kDa glycoprotein) (Rh50A)
          Length = 409

 Score =  265 bits (676), Expect = 2e-70
 Identities = 136/285 (47%), Positives = 194/285 (68%), Gaps = 5/285 (1%)
 Frame = +3

Query: 12  FVITAAVLQAFVFILLAIFSDYEPRIDAGVTGSANNSVLQDT--LSNVYPYFQDVQGMIF 185
           F + A VL+  + +L  +F +YE   D  V    N +   D      +YP FQDV  MIF
Sbjct: 5   FPLMAIVLEIAMIVLFGLFVEYET--DQTVLEQLNITKPTDMGIFFELYPLFQDVHVMIF 62

Query: 186 LGFGFLMTFLKKYGYSSVGINFFIAAISIQWALVLNGFLNSHATRIYLDGTSLLNAEFAT 365
           +GFGFLMTFLKKYG+SSVGIN  +AA+ +QW  ++ G L S   +  +   +++NA+F+ 
Sbjct: 63  VGFGFLMTFLKKYGFSSVGINLLVAALGLQWGTIVQGILQSQGQKFNIGIKNMINADFSA 122

Query: 366 ATILISFGVVLGKTTPLQMLIMSFIEMPIFVLNEYIGRHLLKVSDVGDSIFVHTFGAYFG 545
           AT+LISFG VLGKT+P QMLIM+ +E+  F  NEY+   + K SD+G S+ +H FGAYFG
Sbjct: 123 ATVLISFGAVLGKTSPTQMLIMTILEIVFFAHNEYLVSEIFKASDIGASMTIHAFGAYFG 182

Query: 546 MFLSRVIYKPKMGKS-KNEGAYYHSDVFSMIGTLILWIFWPSFNSGGID-GDQRHRAVVN 719
           + ++ ++Y+  + K  +NE + Y+SD+F+MIGTL LW+FWPSFNS   + GD++ RA+V+
Sbjct: 183 LAVAGILYRSGLRKGHENEESAYYSDLFAMIGTLFLWMFWPSFNSAIAEPGDKQCRAIVD 242

Query: 720 TFCALLGSTILTFIVSALVE-KGKINMVHVANATLSGGVAVGASA 851
           T+ +L    +  F  S+LVE +GK+NMVH+ NATL+GGVAVG  A
Sbjct: 243 TYFSLAACVLTAFAFSSLVEHRGKLNMVHIQNATLAGGVAVGTCA 287
>sp|Q28446|RHL_HYLPI RH-like protein (Rhesus-like protein)
          Length = 354

 Score =  154 bits (390), Expect = 2e-37
 Identities = 96/279 (34%), Positives = 150/279 (53%), Gaps = 4/279 (1%)
 Frame = +3

Query: 24  AAVLQAFVFILLAIFSDYEPRIDAGVTGSANNSVLQDTLSNVYPYFQDVQGMIFLGFGFL 203
           A  L+A + +L   F+ Y+  ++            Q  L   Y   QD+  M  LG GFL
Sbjct: 17  ALTLEAALILLFFFFTHYDASLED-----------QKGLVATYQVGQDLTVMAALGLGFL 65

Query: 204 MTFLKKYGYSSVGINFFIAAISIQWALVLNGFLNSHAT-RIYLDGTSLLNAEFATATILI 380
            + L+++ +SSV  N F+ A+ +QWA++L+GFL+     ++ +   S+  A  +  + LI
Sbjct: 66  TSNLRRHSWSSVAFNLFMLALGVQWAILLDGFLSQFPPGKVVIKLLSIRLATMSAMSSLI 125

Query: 381 SFGVVLGKTTPLQMLIMSFIEMPIFVLNEYIGRHLLKVSDVGDSIFVHTFGAYFGMFLSR 560
           S G VLGK   +Q+++M  +E+  F     +  ++ K     + + +H F AYFG+ ++ 
Sbjct: 126 SVGAVLGKVNLVQLVVMVLVELTAFGTMRMVINNIFKTDYHVNIMHIHVFAAYFGLTVAW 185

Query: 561 VIYK-PKMGKSKNEGAYYHSDVFSMIGTLILWIFWPSFNSGGIDGD-QRHRAVVNTFCAL 734
            + K P  G    E       + +M+G L LWIFWPSFNS  +    +R  AV NT+ AL
Sbjct: 186 CLPKPPPEGTEDKEQIANSPSLSAMLGALFLWIFWPSFNSALLTNPIERKNAVFNTYYAL 245

Query: 735 LGSTILTFIVSALVE-KGKINMVHVANATLSGGVAVGAS 848
             ST+    VS+L   +GKINM ++ NA L+GGVAVG S
Sbjct: 246 AVSTVTAISVSSLAHPQGKINMTYMHNAVLAGGVAVGTS 284
>sp|Q28849|RHL_MACMU RH-like protein (Rhesus-like protein)
          Length = 417

 Score =  148 bits (374), Expect = 2e-35
 Identities = 91/279 (32%), Positives = 152/279 (54%), Gaps = 4/279 (1%)
 Frame = +3

Query: 24  AAVLQAFVFILLAIFSDYEPRIDAGVTGSANNSVLQDTLSNVYPYFQDVQGMIFLGFGFL 203
           A  L+A + +L   F+ Y+  ++            Q  L   Y   QD+  M  LG GF 
Sbjct: 17  ALTLEAALILLFFFFTYYDASLED-----------QKGLVASYQVCQDLTVMAVLGLGFF 65

Query: 204 MTFLKKYGYSSVGINFFIAAISIQWALVLNGFLNSHAT-RIYLDGTSLLNAEFATATILI 380
            + L++  +SSV  N F+ A+ +QWA++L+GFL+  +  ++ +   S+  A  +T ++LI
Sbjct: 66  TSNLRRNSWSSVAFNLFLLALGVQWAILLDGFLSQFSPGKVAIKLFSIRLATRSTMSMLI 125

Query: 381 SFGVVLGKTTPLQMLIMSFIEMPIFVLNEYIGRHLLKVSDVGDSIFVHTFGAYFGMFLSR 560
           S   VLGK   +Q+++M  +E+ +F     +  ++ K+    + + +H F AYFG+ ++ 
Sbjct: 126 SMNAVLGKVNLVQLVVMELVELTVFGTMRIVINNIFKIDYGMNMMHIHVFAAYFGLTVAW 185

Query: 561 VIYKP-KMGKSKNEGAYYHSDVFSMIGTLILWIFWPSFNSG-GIDGDQRHRAVVNTFCAL 734
            + KP   G            +F+M+GTL LW+FWP+FNS   ++  +R  AV +T+ AL
Sbjct: 186 CLPKPLPKGTEDKYQTTTSPSLFAMLGTLFLWMFWPTFNSALLLNPIERKNAVFSTYYAL 245

Query: 735 LGSTILTFIVSALVEK-GKINMVHVANATLSGGVAVGAS 848
             S +    VS+L    GKINM ++ NA L+GGVA+ AS
Sbjct: 246 AVSAVTAISVSSLAHPGGKINMTYMHNAALAGGVALSAS 284
>sp|Q28481|RHL_MACFA RH-like protein (Rhesus-like protein)
          Length = 417

 Score =  148 bits (374), Expect = 2e-35
 Identities = 92/279 (32%), Positives = 152/279 (54%), Gaps = 4/279 (1%)
 Frame = +3

Query: 24  AAVLQAFVFILLAIFSDYEPRIDAGVTGSANNSVLQDTLSNVYPYFQDVQGMIFLGFGFL 203
           A  L+A + +L   F+ Y+  ++            Q  L   Y   QD+  M  LG GF 
Sbjct: 17  ALTLEAALILLFFFFTYYDASLED-----------QKGLVASYQVCQDLTVMAVLGLGFF 65

Query: 204 MTFLKKYGYSSVGINFFIAAISIQWALVLNGFLNSHAT-RIYLDGTSLLNAEFATATILI 380
            + L++  +SSV  N F+ A+ +QWA++L+GFL+  +  ++ +   S+  A  +T ++LI
Sbjct: 66  TSNLRRNSWSSVAFNLFLLALGVQWAILLDGFLSQFSPGKVVIKLFSIRLATRSTTSMLI 125

Query: 381 SFGVVLGKTTPLQMLIMSFIEMPIFVLNEYIGRHLLKVSDVGDSIFVHTFGAYFGMFLSR 560
           S   VLGK    Q+++M  +E+ +F     +  ++ K+    + + +H F AYFG+ ++ 
Sbjct: 126 SMNAVLGKVNLAQLVVMELVELTVFGTMRIVIYNIFKIDYGMNMMHIHVFAAYFGLTVAW 185

Query: 561 VIYKP-KMGKSKNEGAYYHSDVFSMIGTLILWIFWPSFNSG-GIDGDQRHRAVVNTFCAL 734
            + KP   G            +F+M+GTL LW+FWP+FNS   ++  +R  AV +T+ AL
Sbjct: 186 CLPKPLPKGTEDKYQTTTSPSLFAMLGTLFLWMFWPTFNSALLLNPIERKNAVFSTYYAL 245

Query: 735 LGSTILTFIVSALVE-KGKINMVHVANATLSGGVAVGAS 848
             S +    VS+L   + KINM ++ NA L+GGVAVGAS
Sbjct: 246 AVSAVTAISVSSLAHPQRKINMTYMPNAGLAGGVAVGAS 284
>sp|Q28426|RHLC_GORGO RH-like protein IC (Rhesus-like protein IC)
          Length = 417

 Score =  140 bits (353), Expect = 4e-33
 Identities = 91/282 (32%), Positives = 152/282 (53%), Gaps = 5/282 (1%)
 Frame = +3

Query: 18  ITAAVLQAFVFILLAIFSDYEPRIDAGVTGSANNSVLQDTLSNVYPYFQDVQGMIFLGFG 197
           + A  L+A + +L   F+ Y+  ++            Q  L   Y   QD+  M  +GFG
Sbjct: 15  LCALTLEAALILLFYFFTHYDASLED-----------QKGLVASYQVGQDLTVMAAIGFG 63

Query: 198 FLMTFLKKYGYSSVGINFFIAAISIQWALVLNGFLNSHAT-RIYLDGTSLLNAEFATATI 374
           FL +  +++ +SSV  N F+ A+ +QWA++L+GFL+     ++ +   S+  A  +  ++
Sbjct: 64  FLTSSFRRHSWSSVAFNLFMLALGVQWAILLDGFLSQFPPGKVVITLFSIRLATMSALSV 123

Query: 375 LISFGVVLGKTTPLQMLIMSFIEMPIFVLNEYIGRHLLKVSDVGDSIFVHTFGAYFGMFL 554
           LIS G VLG    +Q+++M  +E+        +  ++       +    + F AYFG+ +
Sbjct: 124 LISAGAVLGYVNLVQLVVMVLVEVTALGTMRMVISNIFNTDYHMNMTHFYVFAAYFGVTV 183

Query: 555 SRVIYK--PKMGKSKNEGAYYHSDVFSMIGTLILWIFWPSFNSGGIDGD-QRHRAVVNTF 725
           +  + K  P + + K++ A   S + +M+GTL LW+FWPSFNS  +    +R  AV NT+
Sbjct: 184 AWCLPKPLPDIKEDKDQIATIPS-LSAMLGTLFLWMFWPSFNSALLRSPIERKNAVFNTY 242

Query: 726 CALLGSTILTFIVSALVE-KGKINMVHVANATLSGGVAVGAS 848
            AL  S +    VS+L   +GKINM ++ NA L+GGVAVG S
Sbjct: 243 YALAVSVVTAISVSSLAHPQGKINMTYMHNAVLAGGVAVGTS 284
>sp|Q28427|RHLD_GORGO RH-like protein ID (Rhesus-like protein ID)
          Length = 417

 Score =  133 bits (335), Expect = 5e-31
 Identities = 88/282 (31%), Positives = 150/282 (53%), Gaps = 5/282 (1%)
 Frame = +3

Query: 18  ITAAVLQAFVFILLAIFSDYEPRIDAGVTGSANNSVLQDTLSNVYPYFQDVQGMIFLGFG 197
           + A  L+A + +L   F+ Y+  ++            Q  L   Y   QD+  M  +GFG
Sbjct: 15  LCALTLEAALTLLFYFFTHYDASLED-----------QKGLVASYQVGQDLTVMAAIGFG 63

Query: 198 FLMTFLKKYGYSSVGINFFIAAISIQWALVLNGFLNSHAT-RIYLDGTSLLNAEFATATI 374
           FL +  + + +SSV  N F+ A+ +QWA++L+GFL+     ++ +   S+  A  +  ++
Sbjct: 64  FLTSSFRGHSWSSVAFNLFMLALGVQWAILLDGFLSQFPPGKVVITLFSIRLATMSALSV 123

Query: 375 LISFGVVLGKTTPLQMLIMSFIEMPIFVLNEYIGRHLLKVSDVGDSIFVHTFGAYFGMFL 554
           LIS G VLG    +Q+++M  +E+        +  ++       + + ++ F A FG+ +
Sbjct: 124 LISAGAVLGYVNLVQLVVMVLVEVTALGTMRMVISNIFNTDYHMNMMHIYVFAACFGLSV 183

Query: 555 SRVIYKP--KMGKSKNEGAYYHSDVFSMIGTLILWIFWPSFNSGGIDGD-QRHRAVVNTF 725
           +  + KP  K  + K++ A   S + +M+G L LW+FWPSFNS  +    +R  AV NT+
Sbjct: 184 AWCLPKPLAKGTEDKDQTATIPS-LSAMLGALFLWMFWPSFNSALLRSPIERKNAVFNTY 242

Query: 726 CALLGSTILTFIVSALVE-KGKINMVHVANATLSGGVAVGAS 848
            A+  S +    VS+L   +GKINM ++ NA L+GGVAV  S
Sbjct: 243 YAVAVSVVTAISVSSLAHPQGKINMTYMHNAVLAGGVAVATS 284
>sp|Q28814|RHLR_PANTR RH-like protein IIR (Rhesus-like protein IIR)
          Length = 417

 Score =  132 bits (333), Expect = 9e-31
 Identities = 87/282 (30%), Positives = 152/282 (53%), Gaps = 5/282 (1%)
 Frame = +3

Query: 18  ITAAVLQAFVFILLAIFSDYEPRIDAGVTGSANNSVLQDTLSNVYPYFQDVQGMIFLGFG 197
           + A  L+A + +L   F+ Y+  ++            Q  L   Y   QD+  M  +GFG
Sbjct: 15  LCALTLEAALILLFYFFTQYDASLED-----------QKGLVASYQVGQDLTVMAAIGFG 63

Query: 198 FLMTFLKKYGYSSVGINFFIAAISIQWALVLNGFLNSHAT-RIYLDGTSLLNAEFATATI 374
           FL +  +++ +SSV  + F+ A+ +QWA++L+GFL+     ++ +   S+  A  +  ++
Sbjct: 64  FLTSSFRRHSWSSVAFSLFMLALGVQWAILLDGFLSQFPPGKVVITLFSIRLATTSALSV 123

Query: 375 LISFGVVLGKTTPLQMLIMSFIEMPIFVLNEYIGRHLLKVSDVGDSIFVHTFGAYFGMFL 554
           LIS   VLGK   +Q+++M  +E+        +  ++       + + ++ F AYFG+ +
Sbjct: 124 LISVDAVLGKVNLVQLVVMVLVEVTALGTVRMVISNIFNTDYHMNLMHIYVFAAYFGLSV 183

Query: 555 SRVIYK--PKMGKSKNEGAYYHSDVFSMIGTLILWIFWPSFNSGGIDGD-QRHRAVVNTF 725
           +  + K  PK  + K++ A   S + +M+G L LW+FWPSFNS  +    +R  AV NT+
Sbjct: 184 AWCLPKPLPKGTEDKDQIATIPS-LSAMLGALFLWMFWPSFNSALLRSPIERKNAVFNTY 242

Query: 726 CALLGSTILTFIVSALVE-KGKINMVHVANATLSGGVAVGAS 848
            A+  S +     S+L   +GKI+M ++ NA L+GGVAVG S
Sbjct: 243 YAVAVSVVTAISGSSLAHPQGKISMSYMHNAVLAGGVAVGTS 284
>sp|Q28813|RHLA_PANTR RH-like protein IA (Rhesus-like protein IA)
          Length = 417

 Score =  132 bits (333), Expect = 9e-31
 Identities = 87/282 (30%), Positives = 152/282 (53%), Gaps = 5/282 (1%)
 Frame = +3

Query: 18  ITAAVLQAFVFILLAIFSDYEPRIDAGVTGSANNSVLQDTLSNVYPYFQDVQGMIFLGFG 197
           + A  L+A + +L   F+ Y+  ++            Q  L   Y   QD+  M  +GFG
Sbjct: 15  LCALTLEAALILLFYFFTQYDASLED-----------QKGLVASYQVGQDLTVMAAIGFG 63

Query: 198 FLMTFLKKYGYSSVGINFFIAAISIQWALVLNGFLNSHAT-RIYLDGTSLLNAEFATATI 374
           FL +  +++ +SSV  + F+ A+ +QWA++L+GFL+     ++ +   S+  A  +  ++
Sbjct: 64  FLTSSFRRHSWSSVAFSLFMLALGVQWAILLDGFLSQFPPGKVVITLFSIRLATTSALSV 123

Query: 375 LISFGVVLGKTTPLQMLIMSFIEMPIFVLNEYIGRHLLKVSDVGDSIFVHTFGAYFGMFL 554
           LIS   VLGK   +Q+++M  +E+        +  ++       + + ++ F AYFG+ +
Sbjct: 124 LISVDAVLGKVNLVQLVVMVLVEVTALGTVRMVISNIFNTDYHMNLMHIYVFAAYFGLSV 183

Query: 555 SRVIYK--PKMGKSKNEGAYYHSDVFSMIGTLILWIFWPSFNSGGIDGD-QRHRAVVNTF 725
           +  + K  PK  + K++ A   S + +M+G L LW+FWPSFNS  +    +R  AV NT+
Sbjct: 184 AWCLPKPLPKGTEDKDQIATIPS-LSAMLGALFLWMFWPSFNSALLRSPIERKNAVFNTY 242

Query: 726 CALLGSTILTFIVSALVE-KGKINMVHVANATLSGGVAVGAS 848
            A+  S +     S+L   +GKI+M ++ NA L+GGVAVG S
Sbjct: 243 YAVAVSVVTAISGSSLAHPQGKISMSYMHNAVLAGGVAVGTS 284
>sp|Q28812|RHLF_PANTR RH-like protein IIF (Rhesus-like protein IIF)
          Length = 417

 Score =  132 bits (331), Expect = 2e-30
 Identities = 88/282 (31%), Positives = 151/282 (53%), Gaps = 5/282 (1%)
 Frame = +3

Query: 18  ITAAVLQAFVFILLAIFSDYEPRIDAGVTGSANNSVLQDTLSNVYPYFQDVQGMIFLGFG 197
           + A  L+A + +L   F+ Y+  ++            Q  L   Y   QD+  M  +GFG
Sbjct: 15  LCALTLEAALILLFYFFTHYDASLED-----------QKGLVASYQVGQDLTVMAAIGFG 63

Query: 198 FLMTFLKKYGYSSVGINFFIAAISIQWALVLNGFLNSHAT-RIYLDGTSLLNAEFATATI 374
           FL +  +++ +SSV  N F+ A+ +QWA++L+GFL+     ++ +   S+  A  +  ++
Sbjct: 64  FLTSSFRRHSWSSVAFNLFMLALGVQWAILLDGFLSQFPPGKVVITLFSIRLATTSALSV 123

Query: 375 LISFGVVLGKTTPLQMLIMSFIEMPIFVLNEYIGRHLLKVSDVGDSIFVHTFGAYFGMFL 554
           LIS G VLG    +Q+++M  +E+        +  ++       + +  + F AYFG+ +
Sbjct: 124 LISAGAVLGYVNLVQLVVMVLVEVTALGTMRMVISNIFNTDYHMNMMHFYLFTAYFGVTV 183

Query: 555 SRVIYK--PKMGKSKNEGAYYHSDVFSMIGTLILWIFWPSFNSGGIDGD-QRHRAVVNTF 725
           +  + K  P + + K++ A   S + +M+G L LW+FWPSFNS  +    +R  AV NT+
Sbjct: 184 AWCLPKPLPDVKEDKDQIATIPS-LSAMLGALFLWMFWPSFNSALLRSPIERKNAVFNTY 242

Query: 726 CALLGSTILTFIVSALVE-KGKINMVHVANATLSGGVAVGAS 848
            AL  S +     S+L   +GKI+M +V +A L+GGVAVG S
Sbjct: 243 YALAVSVVTAISGSSLAHPQGKISMTYVHSAVLAGGVAVGTS 284
>sp|Q02161|RHD_HUMAN Blood group Rh(D) polypeptide (Rhesus D antigen) (RHXIII) (Rh
           polypeptide 2) (RhPII)
          Length = 417

 Score =  129 bits (323), Expect = 1e-29
 Identities = 83/279 (29%), Positives = 144/279 (51%), Gaps = 4/279 (1%)
 Frame = +3

Query: 24  AAVLQAFVFILLAIFSDYEPRIDAGVTGSANNSVLQDTLSNVYPYFQDVQGMIFLGFGFL 203
           A  L+A + +L   F+ Y+  ++            Q  L   Y   QD+  M  +G GFL
Sbjct: 17  ALTLEAALILLFYFFTHYDASLED-----------QKGLVASYQVGQDLTVMAAIGLGFL 65

Query: 204 MTFLKKYGYSSVGINFFIAAISIQWALVLNGFLNSHAT-RIYLDGTSLLNAEFATATILI 380
            +  +++ +SSV  N F+ A+ +QWA++L+GFL+   + ++ +   S+  A  +  ++LI
Sbjct: 66  TSSFRRHSWSSVAFNLFMLALGVQWAILLDGFLSQFPSGKVVITLFSIRLATMSALSVLI 125

Query: 381 SFGVVLGKTTPLQMLIMSFIEMPIFVLNEYIGRHLLKVSDVGDSIFVHTFGAYFGMFLSR 560
           S   VLGK    Q+++M  +E+        +  ++       + + ++ F AYFG+ ++ 
Sbjct: 126 SVDAVLGKVNLAQLVVMVLVEVTALGNLRMVISNIFNTDYHMNMMHIYVFAAYFGLSVAW 185

Query: 561 VIYKP-KMGKSKNEGAYYHSDVFSMIGTLILWIFWPSFNSGGIDGD-QRHRAVVNTFCAL 734
            + KP   G    +       + +M+G L LW+FWPSFNS  +    +R  AV NT+ A+
Sbjct: 186 CLPKPLPEGTEDKDQTATIPSLSAMLGALFLWMFWPSFNSALLRSPIERKNAVFNTYYAV 245

Query: 735 LGSTILTFIVSALVE-KGKINMVHVANATLSGGVAVGAS 848
             S +     S+L   +GKI+  +V +A L+GGVAVG S
Sbjct: 246 AVSVVTAISGSSLAHPQGKISKTYVHSAVLAGGVAVGTS 284
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 95,006,653
Number of Sequences: 369166
Number of extensions: 1974317
Number of successful extensions: 5362
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5079
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5326
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8390082510
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)