Planaria EST Database


DrC_02926

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_02926
         (340 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P14586|HRP3_PLAFS  Histidine-rich protein                       36   0.024
sp|Q7V1M1|ACSF_PROMP  Magnesium-protoporphyrin IX monomethyl...    33   0.27 
sp|Q58510|YB10_METJA  Hypothetical protein MJ1110                  31   0.78 
sp|Q75DE8|ASK1_ASHGO  DASH complex subunit ASK1 (Outer kinet...    30   1.7  
sp|P46413|GSHB_RAT  Glutathione synthetase (Glutathione synt...    29   3.0  
sp|P48637|GSHB_HUMAN  Glutathione synthetase (Glutathione sy...    29   3.0  
sp|Q7NFT5|PSAB_GLOVI  Photosystem I P700 chlorophyll a apopr...    29   3.9  
sp|P51855|GSHB_MOUSE  Glutathione synthetase (Glutathione sy...    28   5.1  
sp|Q6UB98|ANR12_HUMAN  Ankyrin repeat domain protein 12 (Ank...    28   5.1  
sp|Q5H7C3|SNX4_PICPA  Sorting nexin-4 (Autophagy-related pro...    28   5.1  
>sp|P14586|HRP3_PLAFS Histidine-rich protein
          Length = 82

 Score = 36.2 bits (82), Expect = 0.024
 Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
 Frame = -2

Query: 186 HQYHIYLRRVYMLERHLLIFSYMLHHSQHQFYHQ---LY*NHHSIYQIL 49
           H+YH Y  R + L  HL    +   H  H+ +H+   L+ N H I+QIL
Sbjct: 4   HRYHHYFHRHHHLNHHLYHRHHHHRHHHHRHHHRHQILHQNRHQIHQIL 52
>sp|Q7V1M1|ACSF_PROMP Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase
           (Mg-protoporphyrin IX monomethyl ester oxidative
           cyclase)
          Length = 390

 Score = 32.7 bits (73), Expect = 0.27
 Identities = 23/73 (31%), Positives = 32/73 (43%), Gaps = 7/73 (9%)
 Frame = -2

Query: 243 KTIPLFSFFHH-----NILSTFFQHQYHIYLRRVYMLERHLLIFSYMLHHSQHQFYHQL- 82
           K  PLF+FF +     N    FF        R V  L + + IF Y L H    +YH+  
Sbjct: 196 KIFPLFNFFENWCQDENRHGDFFDALMKAQPRTVKSLSQKIEIFGYTLKHPIFDYYHRFR 255

Query: 81  -Y*NHHSIYQILF 46
            + N+H I   L+
Sbjct: 256 YFLNNHPIVSKLW 268
>sp|Q58510|YB10_METJA Hypothetical protein MJ1110
          Length = 486

 Score = 31.2 bits (69), Expect = 0.78
 Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 1/88 (1%)
 Frame = +3

Query: 69  DDFNKA-GDKIDADCDAAYMKILKDVVPAYKPFEDKCGIDVGKMSKECYGERKKIEESFS 245
           D+  KA  +KID   +    K L   +     F ++  I  G +   C  ERK  E    
Sbjct: 246 DEIEKAINEKIDKLLNEEEKKYLNRYLELCLLFREEADISGGILDVRCMEERKLKELELK 305

Query: 246 KDIDNLDLSCDAEYGKTVKEHIKAKNKL 329
           + ++   L  D E  + +K+ IK KN+L
Sbjct: 306 EILEKEGLYRDGEPIEPLKKAIKIKNEL 333
>sp|Q75DE8|ASK1_ASHGO DASH complex subunit ASK1 (Outer kinetochore protein ASK1)
           (Associated with spindles and kinetochores protein 1)
          Length = 181

 Score = 30.0 bits (66), Expect = 1.7
 Identities = 13/40 (32%), Positives = 22/40 (55%)
 Frame = +3

Query: 57  DKLNDDFNKAGDKIDADCDAAYMKILKDVVPAYKPFEDKC 176
           ++L+ +      KIDA+  A + KI KD++PA   +   C
Sbjct: 13  EQLDQEITLQLQKIDANLSACFSKITKDIIPAVARYGAVC 52
>sp|P46413|GSHB_RAT Glutathione synthetase (Glutathione synthase) (GSH synthetase)
           (GSH-S)
          Length = 474

 Score = 29.3 bits (64), Expect = 3.0
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = -1

Query: 202 FDIFPTSIPHLSSKGLYAGTTSFNIFIYAASQSASIL 92
           F +FP+ +P    +  YA    FNI + A SQ+++ L
Sbjct: 50  FTLFPSPVPSTLLEQAYAVQMDFNILVDAVSQNSAFL 86
>sp|P48637|GSHB_HUMAN Glutathione synthetase (Glutathione synthase) (GSH synthetase)
           (GSH-S)
          Length = 474

 Score = 29.3 bits (64), Expect = 3.0
 Identities = 13/37 (35%), Positives = 21/37 (56%)
 Frame = -1

Query: 202 FDIFPTSIPHLSSKGLYAGTTSFNIFIYAASQSASIL 92
           F +FP+ +P    +  YA    FN+ + A SQ+A+ L
Sbjct: 50  FTLFPSLVPSALLEQAYAVQMDFNLLVDAVSQNAAFL 86
>sp|Q7NFT5|PSAB_GLOVI Photosystem I P700 chlorophyll a apoprotein A2 (PsaB)
          Length = 872

 Score = 28.9 bits (63), Expect = 3.9
 Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
 Frame = +3

Query: 111 DAAYMKILKDVVPAYKPFEDKCGIDVGKMSKECYGERKKIEESFSKD-IDNLD 266
           DA   K+ ++   A K F +K GI+  +++ + YGE K +  +   D  DN D
Sbjct: 800 DAYNQKLSEERASAVKAFFEKKGIEAERLTAKGYGETKPVAPNAKPDGSDNPD 852
>sp|P51855|GSHB_MOUSE Glutathione synthetase (Glutathione synthase) (GSH synthetase)
           (GSH-S)
          Length = 474

 Score = 28.5 bits (62), Expect = 5.1
 Identities = 13/37 (35%), Positives = 20/37 (54%)
 Frame = -1

Query: 202 FDIFPTSIPHLSSKGLYAGTTSFNIFIYAASQSASIL 92
           F +FP+ +P    +  YA    FNI + A SQ+ + L
Sbjct: 50  FTLFPSPVPSALLEQAYAVQMDFNILVDAVSQNPAFL 86
>sp|Q6UB98|ANR12_HUMAN Ankyrin repeat domain protein 12 (Ankyrin repeat-containing cofactor
            2) (GAC-1 protein)
          Length = 2062

 Score = 28.5 bits (62), Expect = 5.1
 Identities = 21/79 (26%), Positives = 37/79 (46%)
 Frame = +3

Query: 93   KIDADCDAAYMKILKDVVPAYKPFEDKCGIDVGKMSKECYGERKKIEESFSKDIDNLDLS 272
            +ID +    ++K  K+        ++K   D+ KM ++ + + KKI+     + D LDLS
Sbjct: 805  EIDIEKQEKHIKESKEKPEKRSQIKEK---DIEKMERKTFEKEKKIKHEHKSEKDKLDLS 861

Query: 273  CDAEYGKTVKEHIKAKNKL 329
                      + IK K+KL
Sbjct: 862  -------ECVDKIKEKDKL 873
>sp|Q5H7C3|SNX4_PICPA Sorting nexin-4 (Autophagy-related protein 24) (Pexophagy
           zeocin-resistent mutant protein 16)
          Length = 661

 Score = 28.5 bits (62), Expect = 5.1
 Identities = 13/44 (29%), Positives = 25/44 (56%)
 Frame = +3

Query: 6   LNSFQKRALSADCQKEFDKLNDDFNKAGDKIDADCDAAYMKILK 137
           +N+F+K    ++  KEF ++ D  NK  + I+   D  Y +++K
Sbjct: 237 MNAFKKPTYESENAKEFQEITDKSNKLQENIN-KIDKIYQRVVK 279
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,022,170
Number of Sequences: 369166
Number of extensions: 624603
Number of successful extensions: 2388
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2272
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2365
length of database: 68,354,980
effective HSP length: 80
effective length of database: 53,576,180
effective search space used: 1714437760
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)