Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_027_B21
(340 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P14586|HRP3_PLAFS Histidine-rich protein 36 0.024
sp|Q7V1M1|ACSF_PROMP Magnesium-protoporphyrin IX monomethyl... 33 0.27
sp|Q58510|YB10_METJA Hypothetical protein MJ1110 31 0.78
sp|Q75DE8|ASK1_ASHGO DASH complex subunit ASK1 (Outer kinet... 30 1.7
sp|P46413|GSHB_RAT Glutathione synthetase (Glutathione synt... 29 3.0
sp|P48637|GSHB_HUMAN Glutathione synthetase (Glutathione sy... 29 3.0
sp|Q7NFT5|PSAB_GLOVI Photosystem I P700 chlorophyll a apopr... 29 3.9
sp|P51855|GSHB_MOUSE Glutathione synthetase (Glutathione sy... 28 5.1
sp|Q6UB98|ANR12_HUMAN Ankyrin repeat domain protein 12 (Ank... 28 5.1
sp|Q5H7C3|SNX4_PICPA Sorting nexin-4 (Autophagy-related pro... 28 5.1
>sp|P14586|HRP3_PLAFS Histidine-rich protein
Length = 82
Score = 36.2 bits (82), Expect = 0.024
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Frame = -2
Query: 186 HQYHIYLRRVYMLERHLLIFSYMLHHSQHQFYHQ---LY*NHHSIYQIL 49
H+YH Y R + L HL + H H+ +H+ L+ N H I+QIL
Sbjct: 4 HRYHHYFHRHHHLNHHLYHRHHHHRHHHHRHHHRHQILHQNRHQIHQIL 52
>sp|Q7V1M1|ACSF_PROMP Magnesium-protoporphyrin IX monomethyl ester [oxidative] cyclase
(Mg-protoporphyrin IX monomethyl ester oxidative
cyclase)
Length = 390
Score = 32.7 bits (73), Expect = 0.27
Identities = 23/73 (31%), Positives = 32/73 (43%), Gaps = 7/73 (9%)
Frame = -2
Query: 243 KTIPLFSFFHH-----NILSTFFQHQYHIYLRRVYMLERHLLIFSYMLHHSQHQFYHQL- 82
K PLF+FF + N FF R V L + + IF Y L H +YH+
Sbjct: 196 KIFPLFNFFENWCQDENRHGDFFDALMKAQPRTVKSLSQKIEIFGYTLKHPIFDYYHRFR 255
Query: 81 -Y*NHHSIYQILF 46
+ N+H I L+
Sbjct: 256 YFLNNHPIVSKLW 268
>sp|Q58510|YB10_METJA Hypothetical protein MJ1110
Length = 486
Score = 31.2 bits (69), Expect = 0.78
Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 1/88 (1%)
Frame = +3
Query: 69 DDFNKA-GDKIDADCDAAYMKILKDVVPAYKPFEDKCGIDVGKMSKECYGERKKIEESFS 245
D+ KA +KID + K L + F ++ I G + C ERK E
Sbjct: 246 DEIEKAINEKIDKLLNEEEKKYLNRYLELCLLFREEADISGGILDVRCMEERKLKELELK 305
Query: 246 KDIDNLDLSCDAEYGKTVKEHIKAKNKL 329
+ ++ L D E + +K+ IK KN+L
Sbjct: 306 EILEKEGLYRDGEPIEPLKKAIKIKNEL 333
>sp|Q75DE8|ASK1_ASHGO DASH complex subunit ASK1 (Outer kinetochore protein ASK1)
(Associated with spindles and kinetochores protein 1)
Length = 181
Score = 30.0 bits (66), Expect = 1.7
Identities = 13/40 (32%), Positives = 22/40 (55%)
Frame = +3
Query: 57 DKLNDDFNKAGDKIDADCDAAYMKILKDVVPAYKPFEDKC 176
++L+ + KIDA+ A + KI KD++PA + C
Sbjct: 13 EQLDQEITLQLQKIDANLSACFSKITKDIIPAVARYGAVC 52
>sp|P46413|GSHB_RAT Glutathione synthetase (Glutathione synthase) (GSH synthetase)
(GSH-S)
Length = 474
Score = 29.3 bits (64), Expect = 3.0
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -1
Query: 202 FDIFPTSIPHLSSKGLYAGTTSFNIFIYAASQSASIL 92
F +FP+ +P + YA FNI + A SQ+++ L
Sbjct: 50 FTLFPSPVPSTLLEQAYAVQMDFNILVDAVSQNSAFL 86
>sp|P48637|GSHB_HUMAN Glutathione synthetase (Glutathione synthase) (GSH synthetase)
(GSH-S)
Length = 474
Score = 29.3 bits (64), Expect = 3.0
Identities = 13/37 (35%), Positives = 21/37 (56%)
Frame = -1
Query: 202 FDIFPTSIPHLSSKGLYAGTTSFNIFIYAASQSASIL 92
F +FP+ +P + YA FN+ + A SQ+A+ L
Sbjct: 50 FTLFPSLVPSALLEQAYAVQMDFNLLVDAVSQNAAFL 86
>sp|Q7NFT5|PSAB_GLOVI Photosystem I P700 chlorophyll a apoprotein A2 (PsaB)
Length = 872
Score = 28.9 bits (63), Expect = 3.9
Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
Frame = +3
Query: 111 DAAYMKILKDVVPAYKPFEDKCGIDVGKMSKECYGERKKIEESFSKD-IDNLD 266
DA K+ ++ A K F +K GI+ +++ + YGE K + + D DN D
Sbjct: 800 DAYNQKLSEERASAVKAFFEKKGIEAERLTAKGYGETKPVAPNAKPDGSDNPD 852
>sp|P51855|GSHB_MOUSE Glutathione synthetase (Glutathione synthase) (GSH synthetase)
(GSH-S)
Length = 474
Score = 28.5 bits (62), Expect = 5.1
Identities = 13/37 (35%), Positives = 20/37 (54%)
Frame = -1
Query: 202 FDIFPTSIPHLSSKGLYAGTTSFNIFIYAASQSASIL 92
F +FP+ +P + YA FNI + A SQ+ + L
Sbjct: 50 FTLFPSPVPSALLEQAYAVQMDFNILVDAVSQNPAFL 86
>sp|Q6UB98|ANR12_HUMAN Ankyrin repeat domain protein 12 (Ankyrin repeat-containing cofactor
2) (GAC-1 protein)
Length = 2062
Score = 28.5 bits (62), Expect = 5.1
Identities = 21/79 (26%), Positives = 37/79 (46%)
Frame = +3
Query: 93 KIDADCDAAYMKILKDVVPAYKPFEDKCGIDVGKMSKECYGERKKIEESFSKDIDNLDLS 272
+ID + ++K K+ ++K D+ KM ++ + + KKI+ + D LDLS
Sbjct: 805 EIDIEKQEKHIKESKEKPEKRSQIKEK---DIEKMERKTFEKEKKIKHEHKSEKDKLDLS 861
Query: 273 CDAEYGKTVKEHIKAKNKL 329
+ IK K+KL
Sbjct: 862 -------ECVDKIKEKDKL 873
>sp|Q5H7C3|SNX4_PICPA Sorting nexin-4 (Autophagy-related protein 24) (Pexophagy
zeocin-resistent mutant protein 16)
Length = 661
Score = 28.5 bits (62), Expect = 5.1
Identities = 13/44 (29%), Positives = 25/44 (56%)
Frame = +3
Query: 6 LNSFQKRALSADCQKEFDKLNDDFNKAGDKIDADCDAAYMKILK 137
+N+F+K ++ KEF ++ D NK + I+ D Y +++K
Sbjct: 237 MNAFKKPTYESENAKEFQEITDKSNKLQENIN-KIDKIYQRVVK 279
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,022,170
Number of Sequences: 369166
Number of extensions: 624603
Number of successful extensions: 2388
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2272
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2365
length of database: 68,354,980
effective HSP length: 80
effective length of database: 53,576,180
effective search space used: 1714437760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)