Planaria EST Database


DrC_02912

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_02912
         (793 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9VFC8|GYS_DROME  Putative glycogen [starch] synthase          205   1e-52
sp|Q8MJ26|GYS1_MACMU  Glycogen [starch] synthase, muscle          201   2e-51
sp|P13807|GYS1_HUMAN  Glycogen [starch] synthase, muscle          200   4e-51
sp|P13834|GYS1_RABIT  Glycogen [starch] synthase, muscle          197   4e-50
sp|Q9Z1E4|GYS1_MOUSE  Glycogen [starch] synthase, muscle          196   5e-50
sp|P54859|GYS3_MOUSE  Glycogen [starch] synthase, brain           191   1e-48
sp|P54840|GYS2_HUMAN  Glycogen [starch] synthase, liver           187   3e-47
sp|P17625|GYS2_RAT  Glycogen [starch] synthase, liver             182   7e-46
sp|O93869|GYS_NEUCR  Glycogen [starch] synthase                   176   5e-44
sp|P23337|GYS1_YEAST  Glycogen [starch] synthase, isoform 1       168   2e-41
>sp|Q9VFC8|GYS_DROME Putative glycogen [starch] synthase
          Length = 709

 Score =  205 bits (522), Expect = 1e-52
 Identities = 106/186 (56%), Positives = 133/186 (71%)
 Frame = +2

Query: 2    FPSYYEPWGYTPAECTVMGIPSVTTNLSGFGCFMEDHVIDPKSYGIYIVDRRHRSGEESV 181
            FPSYYEPWGYTPAECTVMGIPSVTTNLSGFGCFME+H+ DPKSYGIYIVDRR+   E SV
Sbjct: 536  FPSYYEPWGYTPAECTVMGIPSVTTNLSGFGCFMEEHISDPKSYGIYIVDRRYIGLENSV 595

Query: 182  EQLTNYMLDFSQYSRRQRIVLRNRTERLSELLDWNNLGFYYKKSRIIALAKQSPHLFDYH 361
            +QL+++M++FS+ +RRQRI+ RNRTERLS+LLDW  LG YY+++R+ AL    P   DY 
Sbjct: 596  QQLSSFMMEFSRLNRRQRIIQRNRTERLSDLLDWRTLGIYYRQARVKALQAVYP---DYV 652

Query: 362  TPISLDESDRFSEKSWHMSRPYSAPGSPTASGISTPKQESGRTSPTSLELDNDEIDEDAE 541
              +SL      S+ +   SRP+S P SPT+S  +TP      +       D D +DE+ E
Sbjct: 653  DELSL----YGSKNNLIFSRPHSEPPSPTSSRHTTPAPSVHGSD------DEDSVDEETE 702

Query: 542  RIELGL 559
              ELG+
Sbjct: 703  LKELGI 708
>sp|Q8MJ26|GYS1_MACMU Glycogen [starch] synthase, muscle
          Length = 737

 Score =  201 bits (511), Expect = 2e-51
 Identities = 100/182 (54%), Positives = 126/182 (69%), Gaps = 2/182 (1%)
 Frame = +2

Query: 2    FPSYYEPWGYTPAECTVMGIPSVTTNLSGFGCFMEDHVIDPKSYGIYIVDRRHRSGEESV 181
            FPSYYEPWGYTPAECTVMGIPS++TNLSGFGCFME+H+ DP +YGIYI+DRR RS ++S 
Sbjct: 505  FPSYYEPWGYTPAECTVMGIPSISTNLSGFGCFMEEHIADPSAYGIYILDRRFRSLDDSC 564

Query: 182  EQLTNYMLDFSQYSRRQRIVLRNRTERLSELLDWNNLGFYYKKSRIIALAKQSPHLFDYH 361
             QLT+++  F Q SRRQRI+ RNRTERLS+LLDW  LG YY  +R +AL+K  P  F Y 
Sbjct: 565  SQLTSFLYSFCQQSRRQRIIQRNRTERLSDLLDWKYLGRYYMSARHMALSKAFPEHFTY- 623

Query: 362  TPISLDESDRFSEKSWHMSRPYSAPGSPTASGISTPKQESGRTSPTS--LELDNDEIDED 535
                 + S+  + + +   RP S P SP+ S  S+P Q      P +  LE D++  DED
Sbjct: 624  -----EPSEADAAQGYRYPRPASVPPSPSLSRHSSPHQSEDEEDPRNGPLEEDSERYDED 678

Query: 536  AE 541
             E
Sbjct: 679  EE 680
>sp|P13807|GYS1_HUMAN Glycogen [starch] synthase, muscle
          Length = 737

 Score =  200 bits (508), Expect = 4e-51
 Identities = 101/182 (55%), Positives = 126/182 (69%), Gaps = 2/182 (1%)
 Frame = +2

Query: 2    FPSYYEPWGYTPAECTVMGIPSVTTNLSGFGCFMEDHVIDPKSYGIYIVDRRHRSGEESV 181
            FPSYYEPWGYTPAECTVMGIPS++TNLSGFGCFME+H+ DP +YGIYI+DRR RS ++S 
Sbjct: 505  FPSYYEPWGYTPAECTVMGIPSISTNLSGFGCFMEEHIADPSAYGIYILDRRFRSLDDSC 564

Query: 182  EQLTNYMLDFSQYSRRQRIVLRNRTERLSELLDWNNLGFYYKKSRIIALAKQSPHLFDYH 361
             QLT+++  F Q SRRQRI+ RNRTERLS+LLDW  LG YY  +R +AL+K  P  F Y 
Sbjct: 565  SQLTSFLYSFCQQSRRQRIIQRNRTERLSDLLDWKYLGRYYMSARHMALSKAFPEHFTYE 624

Query: 362  TPISLDESDRFSEKSWHMSRPYSAPGSPTASGISTPKQESGRTSPTS--LELDNDEIDED 535
                 +E+D  + + +   RP S P SP+ S  S+P Q      P +  LE D +  DED
Sbjct: 625  P----NEAD--AAQGYRYPRPASVPPSPSLSRHSSPHQSEDEEDPRNGPLEEDGERYDED 678

Query: 536  AE 541
             E
Sbjct: 679  EE 680
>sp|P13834|GYS1_RABIT Glycogen [starch] synthase, muscle
          Length = 735

 Score =  197 bits (500), Expect = 4e-50
 Identities = 101/182 (55%), Positives = 123/182 (67%), Gaps = 2/182 (1%)
 Frame = +2

Query: 2    FPSYYEPWGYTPAECTVMGIPSVTTNLSGFGCFMEDHVIDPKSYGIYIVDRRHRSGEESV 181
            FPSYYEPWGYTPAECTVMGIPS++TNLSGFGCFME+H+ DP +YGIYI+DRR RS ++S 
Sbjct: 505  FPSYYEPWGYTPAECTVMGIPSISTNLSGFGCFMEEHIADPSAYGIYILDRRFRSLDDSC 564

Query: 182  EQLTNYMLDFSQYSRRQRIVLRNRTERLSELLDWNNLGFYYKKSRIIALAKQSPHLFDYH 361
             QLT+++  F Q SRRQRI+ RNRTERLS+LLDW  LG YY  +R +ALAK  P  F Y 
Sbjct: 565  SQLTSFLYSFCQQSRRQRIIQRNRTERLSDLLDWKYLGRYYMSARHMALAKAFPDHFTYE 624

Query: 362  TPISLDESDRFSEKSWHMSRPYSAPGSPTASGISTPKQESGRTSPTS--LELDNDEIDED 535
                  E+D  + + +   RP S P SP+ S  S+P Q      P     E D +  DED
Sbjct: 625  P----HEAD--ATQGYRYPRPASVPPSPSLSRHSSPHQSEDEEEPRDGLPEEDGERYDED 678

Query: 536  AE 541
             E
Sbjct: 679  EE 680
>sp|Q9Z1E4|GYS1_MOUSE Glycogen [starch] synthase, muscle
          Length = 738

 Score =  196 bits (499), Expect = 5e-50
 Identities = 100/182 (54%), Positives = 124/182 (68%), Gaps = 2/182 (1%)
 Frame = +2

Query: 2    FPSYYEPWGYTPAECTVMGIPSVTTNLSGFGCFMEDHVIDPKSYGIYIVDRRHRSGEESV 181
            FPSYYEPWGYTPAECTVMGIPS++TNLSGFGCFME+H+ DP +YGIYI+DRR RS ++S 
Sbjct: 505  FPSYYEPWGYTPAECTVMGIPSISTNLSGFGCFMEEHIADPSAYGIYILDRRFRSLDDSC 564

Query: 182  EQLTNYMLDFSQYSRRQRIVLRNRTERLSELLDWNNLGFYYKKSRIIALAKQSPHLFDYH 361
             QLT+++  F Q SRRQRI+ RNRTERLS+LLDW  LG YY  +R +ALAK  P  F Y 
Sbjct: 565  SQLTSFLYSFCQQSRRQRIIQRNRTERLSDLLDWKYLGRYYMSARHMALAKAFPDHFTYE 624

Query: 362  TPISLDESDRFSEKSWHMSRPYSAPGSPTASGISTPKQESGRTSPTS--LELDNDEIDED 535
             P  +D     + + +   RP S P SP+ S  S+P Q      P    L  D++  DE+
Sbjct: 625  -PHEVD-----ATQGYRYPRPVSVPPSPSLSRHSSPHQSEDEEEPRDGPLGEDSERYDEE 678

Query: 536  AE 541
             E
Sbjct: 679  EE 680
>sp|P54859|GYS3_MOUSE Glycogen [starch] synthase, brain
          Length = 737

 Score =  191 bits (486), Expect = 1e-48
 Identities = 98/182 (53%), Positives = 122/182 (67%), Gaps = 2/182 (1%)
 Frame = +2

Query: 2    FPSYYEPWGYTPAECTVMGIPSVTTNLSGFGCFMEDHVIDPKSYGIYIVDRRHRSGEESV 181
            FPSYYEPWGYTPAECTVMGIPS++TNLSGFGCFME+H+ DP +YGIYI+DRR RS ++S 
Sbjct: 504  FPSYYEPWGYTPAECTVMGIPSISTNLSGFGCFMEEHIADPSAYGIYILDRRFRSLDDSC 563

Query: 182  EQLTNYMLDFSQYSRRQRIVLRNRTERLSELLDWNNLGFYYKKSRIIALAKQSPHLFDYH 361
             QLT+++  F Q SRR  I+ RNRTERLS+LLDW  LG YY  +R +ALAK  P  F Y 
Sbjct: 564  SQLTSFLYSFCQQSRRHGIIQRNRTERLSDLLDWKYLGRYYMSARHMALAKAFPDHFTYE 623

Query: 362  TPISLDESDRFSEKSWHMSRPYSAPGSPTASGISTPKQESGRTSPTS--LELDNDEIDED 535
             P  +D     + + +   RP S P SP+ S  S+P Q      P    L  D++  DE+
Sbjct: 624  -PHEVD-----ATQGYRYPRPASVPPSPSLSRHSSPHQSEDEEEPRDGPLGEDSERYDEE 677

Query: 536  AE 541
             E
Sbjct: 678  EE 679
>sp|P54840|GYS2_HUMAN Glycogen [starch] synthase, liver
          Length = 703

 Score =  187 bits (475), Expect = 3e-47
 Identities = 95/180 (52%), Positives = 124/180 (68%)
 Frame = +2

Query: 2    FPSYYEPWGYTPAECTVMGIPSVTTNLSGFGCFMEDHVIDPKSYGIYIVDRRHRSGEESV 181
            FPSYYEPWGYTPAECTVMGIPSVTTNLSGFGCFM++HV DP +YGIYIVDRR RS ++S 
Sbjct: 505  FPSYYEPWGYTPAECTVMGIPSVTTNLSGFGCFMQEHVADPTAYGIYIVDRRFRSPDDSC 564

Query: 182  EQLTNYMLDFSQYSRRQRIVLRNRTERLSELLDWNNLGFYYKKSRIIALAKQSPHLFDYH 361
             QLT ++  F + SRRQRI+ RNRTERLS+LLDW  LG YY+ +R + L++  P  F  H
Sbjct: 565  NQLTKFLYGFCKQSRRQRIIQRNRTERLSDLLDWRYLGRYYQHARHLTLSRAFPDKF--H 622

Query: 362  TPISLDESDRFSEKSWHMSRPYSAPGSPTASGISTPKQESGRTSPTSLELDNDEIDEDAE 541
              ++       + + +   RP S P SP+ S  S+P     ++S    E++++  DE+ E
Sbjct: 623  VELTSPP----TTEGFKYPRPSSVPPSPSGSQASSP-----QSSDVEDEVEDERYDEEEE 673
>sp|P17625|GYS2_RAT Glycogen [starch] synthase, liver
          Length = 703

 Score =  182 bits (463), Expect = 7e-46
 Identities = 102/189 (53%), Positives = 125/189 (66%), Gaps = 3/189 (1%)
 Frame = +2

Query: 2    FPSYYEPWGYTPAECTVMGIPSVTTNLSGFGCFMEDHVIDPKSYGIYIVDRRHRSGEESV 181
            FPSYYEPWGYTPAECTVMGIPSVTTNLSGFGCFM++HV DP +YGIYIVD   RS ++S 
Sbjct: 505  FPSYYEPWGYTPAECTVMGIPSVTTNLSGFGCFMQEHVADPTAYGIYIVD-SVRSPDDSC 563

Query: 182  EQLTNYMLDFSQYSRRQRIVLRNRTERLSELLDWNNLGFYYKKSRIIALAKQSPHLFDYH 361
             QLT ++  F + SRRQRI+ RNRTERLS+LLDW  LG YY+ +R + L++  P  F Y 
Sbjct: 564  NQLTQFLYGFCKQSRRQRIIQRNRTERLSDLLDWRYLGRYYQHARHLTLSRAFPDKF-YL 622

Query: 362  TPISLDESDRFSEKSWHMSRPYSAPGSPTASGISTPKQESGRTSPTSLELDNDE---IDE 532
             P S   +D F        RP S P SP+ S  S+P     ++S    E D DE    +E
Sbjct: 623  EPTSPPTTDGFK-----YPRPSSVPPSPSGSQTSSP-----QSSDVENEGDEDERYDEEE 672

Query: 533  DAERIELGL 559
            +AER  L +
Sbjct: 673  EAERDRLNI 681
>sp|O93869|GYS_NEUCR Glycogen [starch] synthase
          Length = 706

 Score =  176 bits (447), Expect = 5e-44
 Identities = 88/157 (56%), Positives = 110/157 (70%), Gaps = 1/157 (0%)
 Frame = +2

Query: 2   FPSYYEPWGYTPAECTVMGIPSVTTNLSGFGCFMEDHVIDPKSYGIYIVDRRHRSGEESV 181
           F SYYEPWGYTPAECTVMG+PS+TTNLSGFGC+ME+ + +   YGIYIVDRR +  ++SV
Sbjct: 495 FASYYEPWGYTPAECTVMGVPSITTNLSGFGCYMEELIENSSDYGIYIVDRRSKGVDDSV 554

Query: 182 EQLTNYMLDFSQYSRRQRIVLRNRTERLSELLDWNNLGFYYKKSRIIALAKQSPHLFDYH 361
            QLT YM +F+Q SRRQRI  RNRTERLS+LLDW  +G  Y K+R +AL +  P  F+  
Sbjct: 555 NQLTQYMFEFTQKSRRQRINQRNRTERLSDLLDWKRMGMEYVKARQLALRRAYPTSFN-- 612

Query: 362 TPISLDESDRFSEKSWHMSRPYSAPGSP-TASGISTP 469
                +E D        +SRP+S PGSP   +G+ TP
Sbjct: 613 ---GEEEEDFIPGVEQKISRPFSVPGSPRDRTGMMTP 646
>sp|P23337|GYS1_YEAST Glycogen [starch] synthase, isoform 1
          Length = 708

 Score =  168 bits (425), Expect = 2e-41
 Identities = 92/197 (46%), Positives = 118/197 (59%), Gaps = 19/197 (9%)
 Frame = +2

Query: 2    FPSYYEPWGYTPAECTVMGIPSVTTNLSGFGCFMEDHVI--DPKSYGIYIVDRRHRSGEE 175
            FPSYYEPWGYTPAECTVMG+PS+TTN+SGFG +MED +     K YGIYIVDRR +S +E
Sbjct: 504  FPSYYEPWGYTPAECTVMGVPSITTNVSGFGAYMEDLIETDQAKDYGIYIVDRRFKSPDE 563

Query: 176  SVEQLTNYMLDFSQYSRRQRIVLRNRTERLSELLDWNNLGFYYKKSRIIALAKQSPHLFD 355
            SVEQL +YM +F   +RRQRI  RNRTERLS+LLDW  +G  Y K+R + L +  P  F 
Sbjct: 564  SVEQLADYMEEFVNKTRRQRINQRNRTERLSDLLDWKRMGLEYVKARQLGLRRAYPEQFK 623

Query: 356  YHTPISLDESDR---FSEKSWHMSRPYSAPGSPTASGISTPKQESGRTS----------- 493
                 ++ +++       K + ++RP S PGSP     ST     G              
Sbjct: 624  QLVGETISDANMNTLAGGKKFKIARPLSVPGSPKVRSNSTVYMTPGDLGTLQDANNADDY 683

Query: 494  ---PTSLELDNDEIDED 535
                T+  +DND+ D D
Sbjct: 684  FNLSTNGAIDNDDDDND 700
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 91,601,568
Number of Sequences: 369166
Number of extensions: 1897943
Number of successful extensions: 5254
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5041
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5233
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 7425705210
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)