Planaria EST Database


DrC_02902

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_02902
         (831 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9C040|TRIM2_HUMAN  Tripartite motif protein 2 (RING fing...    39   0.018
sp|Q9ESN6|TRIM2_MOUSE  Tripartite motif protein 2 (Neural ac...    39   0.018
sp|O75369|FLNB_HUMAN  Filamin-B (FLN-B) (Beta-filamin) (Acti...    38   0.039
sp|Q9H8W5|TRI45_HUMAN  Tripartite motif protein 45 (RING fin...    36   0.11 
sp|Q8BTM8|FLNA_MOUSE  Filamin-A (Alpha-filamin) (Filamin-1) ...    36   0.11 
sp|Q80X90|FLNB_MOUSE  Filamin-B (FLN-B) (Beta-filamin) (Acti...    36   0.11 
sp|P21333|FLNA_HUMAN  Filamin-A (Alpha-filamin) (Filamin-1) ...    35   0.33 
sp|Q14315|FLNC_HUMAN  Filamin-C (Gamma-filamin) (Filamin-2) ...    35   0.33 
sp|Q8VHX6|FLNC_MOUSE  Filamin-C (Gamma-filamin) (Filamin-2) ...    35   0.33 
sp|P58145|ROAA_ASTLO  Ribosomal operon-associated A protein ...    33   1.3  
>sp|Q9C040|TRIM2_HUMAN Tripartite motif protein 2 (RING finger protein 86)
          Length = 744

 Score = 38.9 bits (89), Expect = 0.018
 Identities = 48/226 (21%), Positives = 90/226 (39%), Gaps = 11/226 (4%)
 Frame = +1

Query: 1   DLNVYFNSLQKQLEKWKMIFSQDVQQDTTTCEGHYEKQRSKVNEYVEKLKECRDQAARLI 180
           D++  F+ LQK L   K +   +++ +        + Q   + +  E +K C +  A+ +
Sbjct: 203 DIHSTFDELQKTLNVRKSVLLMELEVNYGLKHKVLQSQLDTLLQGQESIKSCSNFTAQAL 262

Query: 181 STGQVTNCDHVYSIHNLIYSVDEQLKE-----FGSHMTQCMALKFVGRINLDNFDKG--E 339
           + G  T    V         + E+L E     F  H  +   L F+  +  +   K    
Sbjct: 263 NHGTETEVLLVKK------QMSEKLNELADQDFPLHpreNDQLDFI--VETEGLKKSIHN 314

Query: 340 IGT-LEKLADFSNAEILPIKLPKIKLGQLFFINFRISKR---FCEATKKYISFSVTKSDE 507
           +GT L   A  S        L +  +GQ   +      +    C+    Y++  ++  D 
Sbjct: 315 LGTILTTNAVASETVATGEGLRQTIIGQPMSVTITTKDKDGELCKTGNAYLTAELSTPDG 374

Query: 508 RIKVGSYLQDNKDGTFTLSFPITAIVPHTVSIYFLGEHIRNSPYTI 645
            +  G  L DNK+GT+   + +      T+S+    +HIR SP+ +
Sbjct: 375 SVADGEIL-DNKNGTYEFLYTVQKEGDFTLSLRLYDQHIRGSPFKL 419
>sp|Q9ESN6|TRIM2_MOUSE Tripartite motif protein 2 (Neural activity-related RING finger
           protein)
          Length = 744

 Score = 38.9 bits (89), Expect = 0.018
 Identities = 48/226 (21%), Positives = 90/226 (39%), Gaps = 11/226 (4%)
 Frame = +1

Query: 1   DLNVYFNSLQKQLEKWKMIFSQDVQQDTTTCEGHYEKQRSKVNEYVEKLKECRDQAARLI 180
           D++  F+ LQK L   K +   +++ +        + Q   + +  E +K C +  A+ +
Sbjct: 203 DIHSTFDELQKTLNVRKSVLLMELEVNYGLKHKVLQSQLDTLLQGQESIKSCSNFTAQAL 262

Query: 181 STGQVTNCDHVYSIHNLIYSVDEQLKE-----FGSHMTQCMALKFVGRINLDNFDKG--E 339
           + G  T    V         + E+L E     F  H  +   L F+  +  +   K    
Sbjct: 263 NHGTETEVLLVKK------QMSEKLNELADQDFPLHpreNDQLDFI--VETEGLKKSIHN 314

Query: 340 IGT-LEKLADFSNAEILPIKLPKIKLGQLFFINFRISKR---FCEATKKYISFSVTKSDE 507
           +GT L   A  S        L +  +GQ   +      +    C+    Y++  ++  D 
Sbjct: 315 LGTILTTNAVASETVATGEGLRQTIIGQPMSVTITTKDKDGELCKTGNAYLTAELSTPDG 374

Query: 508 RIKVGSYLQDNKDGTFTLSFPITAIVPHTVSIYFLGEHIRNSPYTI 645
            +  G  L DNK+GT+   + +      T+S+    +HIR SP+ +
Sbjct: 375 SVADGEIL-DNKNGTYEFLYTVQKEGDFTLSLRLYDQHIRGSPFKL 419
>sp|O75369|FLNB_HUMAN Filamin-B (FLN-B) (Beta-filamin) (Actin-binding-like protein)
            (Thyroid autoantigen) (Truncated actin-binding protein)
            (Truncated ABP) (ABP-280 homolog) (ABP-278) (Filamin 3)
            (Filamin homolog 1) (Fh1)
          Length = 2602

 Score = 37.7 bits (86), Expect = 0.039
 Identities = 18/49 (36%), Positives = 26/49 (53%)
 Frame = +1

Query: 535  DNKDGTFTLSFPITAIVPHTVSIYFLGEHIRNSPYTILFKVGNNQAVGA 681
            DNKDGT T+ +  T +  H + I ++G HI  SP        N+ +V A
Sbjct: 1778 DNKDGTVTVRYAPTEVGLHEMHIKYMGSHIPESPLQFYVNYPNSGSVSA 1826

 Score = 32.3 bits (72), Expect = 1.6
 Identities = 24/66 (36%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
 Frame = +1

Query: 535  DNKDGTFTLSFPITAIVPHTVSIY--FLGEHIRNSPYTILFKVGNNQAVGATNGANSIPD 708
            +N+DGT+ + +  TA  P T  IY  F G  I NSP+T++   G   AV         P 
Sbjct: 1666 ENEDGTYDIFY--TAAKPGTYVIYVRFGGVDIPNSPFTVMATDGEVTAV------EEAPV 1717

Query: 709  YNCHPG 726
              C PG
Sbjct: 1718 NACPPG 1723

 Score = 32.0 bits (71), Expect = 2.1
 Identities = 12/51 (23%), Positives = 29/51 (56%)
 Frame = +1

Query: 514 KVGSYLQDNKDGTFTLSFPITAIVPHTVSIYFLGEHIRNSPYTILFKVGNN 666
           ++   +++  DGT+  S+     + HT+++ + G +I +SPY +    G++
Sbjct: 691 RIDIQMKNRMDGTYACSYTPVKAIKHTIAVVWGGVNIPHSPYRVNIGQGSH 741

 Score = 30.8 bits (68), Expect = 4.8
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = +1

Query: 514  KVGSYLQDNKDGTFTLSFPITAIVPHTVSIYFLGEHIRNSPYTI 645
            KV    +D +DGT  +S+  T    + VS  F  EH+  SP+T+
Sbjct: 2044 KVDIQTEDLEDGTCKVSYFPTVPGVYIVSTKFADEHVPGSPFTV 2087

 Score = 30.4 bits (67), Expect = 6.2
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = +1

Query: 535  DNKDGTFTLSFPITAIVPHTVSIYFLGEHIRNSPYTI 645
            DN DGT T+++  +   P+ VS+ +  E I  SP+ +
Sbjct: 1473 DNGDGTHTVTYTPSQEGPYMVSVKYADEEIPRSPFKV 1509

 Score = 30.4 bits (67), Expect = 6.2
 Identities = 13/36 (36%), Positives = 23/36 (63%)
 Frame = +1

Query: 535  DNKDGTFTLSFPITAIVPHTVSIYFLGEHIRNSPYT 642
            DNKDGT T+++  T    +++ + +  +HI  SP+T
Sbjct: 1870 DNKDGTCTVTYLPTLPGDYSILVKYNDKHIPGSPFT 1905
>sp|Q9H8W5|TRI45_HUMAN Tripartite motif protein 45 (RING finger protein 99)
          Length = 580

 Score = 36.2 bits (82), Expect = 0.11
 Identities = 17/52 (32%), Positives = 30/52 (57%)
 Frame = +1

Query: 490 VTKSDERIKVGSYLQDNKDGTFTLSFPITAIVPHTVSIYFLGEHIRNSPYTI 645
           V K  +   V + +QDNKDGT+ +S+       +TV +    +H++ SP+T+
Sbjct: 444 VPKDKKDSPVRTMVQDNKDGTYYISYTPKEPGVYTVWVCIKEQHVQGSPFTV 495
>sp|Q8BTM8|FLNA_MOUSE Filamin-A (Alpha-filamin) (Filamin-1) (Endothelial actin-binding
            protein) (Actin-binding protein 280) (ABP-280) (Nonmuscle
            filamin)
          Length = 2647

 Score = 36.2 bits (82), Expect = 0.11
 Identities = 18/68 (26%), Positives = 32/68 (47%), Gaps = 1/68 (1%)
 Frame = +1

Query: 535  DNKDGTFTLSFPITAIVPHTVSIYFLGEHIRNSPYTILFKVGNNQAVGATNGANSI-PDY 711
            +N+DGTF + +       + + + F GEH+ NSP+ +    G+   V     +  + P Y
Sbjct: 1702 ENEDGTFDIFYTAPQPGKYVICVRFGGEHVPNSPFQVTALAGDQPTVQTPLRSQQLAPQY 1761

Query: 712  NCHPGEDK 735
            N   G  +
Sbjct: 1762 NYPQGSQQ 1769

 Score = 32.7 bits (73), Expect = 1.3
 Identities = 14/41 (34%), Positives = 26/41 (63%)
 Frame = +1

Query: 523  SYLQDNKDGTFTLSFPITAIVPHTVSIYFLGEHIRNSPYTI 645
            +++QDN DGT+T+++       +T+ I + G+ I  SPY +
Sbjct: 1594 THIQDNHDGTYTVAYVPDVPGRYTILIKYGGDEIPFSPYRV 1634

 Score = 32.0 bits (71), Expect = 2.1
 Identities = 16/57 (28%), Positives = 31/57 (54%)
 Frame = +1

Query: 496 KSDERIKVGSYLQDNKDGTFTLSFPITAIVPHTVSIYFLGEHIRNSPYTILFKVGNN 666
           + +E   V + ++DN +GT++ S+     V HT  + + G  I NSP+ +    G++
Sbjct: 712 QDNEGCSVEATVKDNGNGTYSCSYVPRKPVKHTAMVSWGGVSIPNSPFRVNVGAGSH 768
>sp|Q80X90|FLNB_MOUSE Filamin-B (FLN-B) (Beta-filamin) (Actin-binding-like protein)
            (ABP-280-like protein)
          Length = 2602

 Score = 36.2 bits (82), Expect = 0.11
 Identities = 18/49 (36%), Positives = 25/49 (51%)
 Frame = +1

Query: 535  DNKDGTFTLSFPITAIVPHTVSIYFLGEHIRNSPYTILFKVGNNQAVGA 681
            DNKDGT T+ +  T +  H + I + G HI  SP        N+ +V A
Sbjct: 1778 DNKDGTVTVRYAPTEVGLHEMHIKYRGSHIPESPLQFYVNYPNSGSVSA 1826

 Score = 31.2 bits (69), Expect = 3.7
 Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 2/66 (3%)
 Frame = +1

Query: 535  DNKDGTFTLSFPITAIVPHTVSIY--FLGEHIRNSPYTILFKVGNNQAVGATNGANSIPD 708
            +N+DGT+ + +  TA  P T  IY  F G  I NSP+T++   G   A+         P 
Sbjct: 1666 ENEDGTYDIFY--TAAKPGTYVIYVRFGGVDIPNSPFTVMATDGEVTAM------EEAPV 1717

Query: 709  YNCHPG 726
              C PG
Sbjct: 1718 NACPPG 1723

 Score = 30.8 bits (68), Expect = 4.8
 Identities = 12/46 (26%), Positives = 26/46 (56%)
 Frame = +1

Query: 529 LQDNKDGTFTLSFPITAIVPHTVSIYFLGEHIRNSPYTILFKVGNN 666
           ++   DGT+  S+     + HT+++ + G +I +SPY +    G++
Sbjct: 696 MKSRMDGTYACSYTPLKAIKHTIAVVWGGVNIPHSPYRVNIGQGSH 741

 Score = 30.8 bits (68), Expect = 4.8
 Identities = 16/44 (36%), Positives = 24/44 (54%)
 Frame = +1

Query: 514  KVGSYLQDNKDGTFTLSFPITAIVPHTVSIYFLGEHIRNSPYTI 645
            KV    +D +DGT  +S+  T    + VS  F  EH+  SP+T+
Sbjct: 2044 KVDIQTEDLEDGTCKVSYFPTVPGVYIVSTKFADEHVPGSPFTV 2087

 Score = 30.4 bits (67), Expect = 6.2
 Identities = 13/37 (35%), Positives = 22/37 (59%)
 Frame = +1

Query: 535  DNKDGTFTLSFPITAIVPHTVSIYFLGEHIRNSPYTI 645
            DN DGT T+++  +   P+ VS+ +  E I  SP+ +
Sbjct: 1473 DNGDGTHTVTYTPSQEGPYIVSVKYADEEIPRSPFKV 1509

 Score = 30.4 bits (67), Expect = 6.2
 Identities = 13/36 (36%), Positives = 23/36 (63%)
 Frame = +1

Query: 535  DNKDGTFTLSFPITAIVPHTVSIYFLGEHIRNSPYT 642
            DNKDGT T+++  T    +++ + +  +HI  SP+T
Sbjct: 1870 DNKDGTCTVTYLPTLPGDYSILVKYNDKHIPGSPFT 1905
>sp|P21333|FLNA_HUMAN Filamin-A (Alpha-filamin) (Filamin-1) (Endothelial actin-binding
            protein) (Actin-binding protein 280) (ABP-280) (Nonmuscle
            filamin)
          Length = 2647

 Score = 34.7 bits (78), Expect = 0.33
 Identities = 14/47 (29%), Positives = 26/47 (55%)
 Frame = +1

Query: 535  DNKDGTFTLSFPITAIVPHTVSIYFLGEHIRNSPYTILFKVGNNQAV 675
            +N+DGTF + +       + + + F GEH+ NSP+ +    G+  +V
Sbjct: 1702 ENEDGTFDIFYTAPQPGKYVICVRFGGEHVPNSPFQVTALAGDQPSV 1748

 Score = 33.5 bits (75), Expect = 0.74
 Identities = 14/41 (34%), Positives = 26/41 (63%)
 Frame = +1

Query: 523  SYLQDNKDGTFTLSFPITAIVPHTVSIYFLGEHIRNSPYTI 645
            +++QDN DGT+T+++       +T+ I + G+ I  SPY +
Sbjct: 1594 THIQDNHDGTYTVAYVPDVTGRYTILIKYGGDEIPFSPYRV 1634

 Score = 32.0 bits (71), Expect = 2.1
 Identities = 16/57 (28%), Positives = 31/57 (54%)
 Frame = +1

Query: 496 KSDERIKVGSYLQDNKDGTFTLSFPITAIVPHTVSIYFLGEHIRNSPYTILFKVGNN 666
           + +E   V + ++DN +GT++ S+     V HT  + + G  I NSP+ +    G++
Sbjct: 712 QDNEGCPVEALVKDNGNGTYSCSYVPRKPVKHTAMVSWGGVSIPNSPFRVNVGAGSH 768
>sp|Q14315|FLNC_HUMAN Filamin-C (Gamma-filamin) (Filamin-2) (Protein FLNc)
            (Actin-binding-like protein) (ABP-L) (ABP-280-like
            protein)
          Length = 2725

 Score = 34.7 bits (78), Expect = 0.33
 Identities = 16/37 (43%), Positives = 25/37 (67%)
 Frame = +1

Query: 532  QDNKDGTFTLSFPITAIVPHTVSIYFLGEHIRNSPYT 642
            +DNKDGT T+S+  TA   +++ + F  +HI  SP+T
Sbjct: 1907 KDNKDGTCTVSYLPTAPGDYSIIVRFDDKHIPGSPFT 1943

 Score = 34.3 bits (77), Expect = 0.43
 Identities = 15/38 (39%), Positives = 23/38 (60%)
 Frame = +1

Query: 535  DNKDGTFTLSFPITAIVPHTVSIYFLGEHIRNSPYTIL 648
            +N DGTF + +       + ++I F GEHI NSP+ +L
Sbjct: 1696 ENHDGTFDIYYTAPEPGKYVITIRFGGEHIPNSPFHVL 1733

 Score = 34.3 bits (77), Expect = 0.43
 Identities = 17/67 (25%), Positives = 37/67 (55%)
 Frame = +1

Query: 460  EATKKYISFSVTKSDERIKVGSYLQDNKDGTFTLSFPITAIVPHTVSIYFLGEHIRNSPY 639
            EA+ + ++  VT    +++    ++  +D  +++ F    + PHTV++ + G+H+  SP+
Sbjct: 2244 EASSQDMTAQVTSPSGKVEAAEIVE-GEDSAYSVRFVPQEMGPHTVAVKYRGQHVPGSPF 2302

Query: 640  TILFKVG 660
               F VG
Sbjct: 2303 Q--FTVG 2307

 Score = 33.5 bits (75), Expect = 0.74
 Identities = 18/51 (35%), Positives = 25/51 (49%)
 Frame = +1

Query: 529  LQDNKDGTFTLSFPITAIVPHTVSIYFLGEHIRNSPYTILFKVGNNQAVGA 681
            + DNKDGT T+ +  T    H + I + G HI  SP        N++ V A
Sbjct: 1814 ITDNKDGTITVRYAPTEKGLHQMGIKYDGNHIPGSPLQFYVDAINSRHVSA 1864

 Score = 30.8 bits (68), Expect = 4.8
 Identities = 14/39 (35%), Positives = 20/39 (51%)
 Frame = +1

Query: 529 LQDNKDGTFTLSFPITAIVPHTVSIYFLGEHIRNSPYTI 645
           L+D  D TF  ++      PHTV + F G  I  SP+ +
Sbjct: 428 LEDKGDSTFRCTYRPAMEGPHTVHVAFAGAPITRSPFPV 466

 Score = 30.8 bits (68), Expect = 4.8
 Identities = 14/38 (36%), Positives = 23/38 (60%)
 Frame = +1

Query: 532  QDNKDGTFTLSFPITAIVPHTVSIYFLGEHIRNSPYTI 645
            +D KDG+  +S+ +     + VSI F  EHI +SP+ +
Sbjct: 2362 EDRKDGSCGVSYVVQEPGDYEVSIKFNDEHIPDSPFVV 2399

 Score = 30.4 bits (67), Expect = 6.2
 Identities = 12/39 (30%), Positives = 23/39 (58%)
 Frame = +1

Query: 529  LQDNKDGTFTLSFPITAIVPHTVSIYFLGEHIRNSPYTI 645
            ++DN DGT T+ +      P+TV++ +  + +  SP+ I
Sbjct: 1493 VRDNGDGTHTVHYTPATDGPYTVAVKYADQEVPRSPFKI 1531
>sp|Q8VHX6|FLNC_MOUSE Filamin-C (Gamma-filamin) (Filamin-2) (FLN-C) (Actin-binding-like
           protein) (ABP-L) (ABP-280-like protein)
          Length = 1144

 Score = 34.7 bits (78), Expect = 0.33
 Identities = 16/37 (43%), Positives = 25/37 (67%)
 Frame = +1

Query: 532 QDNKDGTFTLSFPITAIVPHTVSIYFLGEHIRNSPYT 642
           +DNKDGT T+S+  TA   +++ + F  +HI  SP+T
Sbjct: 326 KDNKDGTCTVSYLPTAPGDYSIIVRFDDKHIPGSPFT 362

 Score = 34.3 bits (77), Expect = 0.43
 Identities = 15/38 (39%), Positives = 23/38 (60%)
 Frame = +1

Query: 535 DNKDGTFTLSFPITAIVPHTVSIYFLGEHIRNSPYTIL 648
           +N DGTF + +       + ++I F GEHI NSP+ +L
Sbjct: 115 ENHDGTFDIYYTAPEPGKYVITIRFGGEHIPNSPFHVL 152

 Score = 33.5 bits (75), Expect = 0.74
 Identities = 18/51 (35%), Positives = 25/51 (49%)
 Frame = +1

Query: 529 LQDNKDGTFTLSFPITAIVPHTVSIYFLGEHIRNSPYTILFKVGNNQAVGA 681
           + DNKDGT T+ +  T    H + I + G HI  SP        N++ V A
Sbjct: 233 ITDNKDGTITVRYAPTEKGLHQMGIKYDGNHIPGSPLQFYVDAINSRHVSA 283

 Score = 32.7 bits (73), Expect = 1.3
 Identities = 17/67 (25%), Positives = 36/67 (53%)
 Frame = +1

Query: 460 EATKKYISFSVTKSDERIKVGSYLQDNKDGTFTLSFPITAIVPHTVSIYFLGEHIRNSPY 639
           EA+ + ++  VT    + +    ++  +D  +++ F    + PHTV++ + G+H+  SP+
Sbjct: 663 EASSQDMTAQVTSPSGKTEAAEIVE-GEDSAYSVRFVPQEMGPHTVTVKYRGQHVPGSPF 721

Query: 640 TILFKVG 660
              F VG
Sbjct: 722 Q--FTVG 726

 Score = 30.8 bits (68), Expect = 4.8
 Identities = 14/39 (35%), Positives = 25/39 (64%)
 Frame = +1

Query: 529 LQDNKDGTFTLSFPITAIVPHTVSIYFLGEHIRNSPYTI 645
           ++DN DGT+T+S+       +T++I + G+ I  SP+ I
Sbjct: 9   IRDNGDGTYTVSYLPDMSGRYTITIKYGGDEIPYSPFRI 47

 Score = 30.8 bits (68), Expect = 4.8
 Identities = 14/38 (36%), Positives = 23/38 (60%)
 Frame = +1

Query: 532 QDNKDGTFTLSFPITAIVPHTVSIYFLGEHIRNSPYTI 645
           +D KDG+  +S+ +     + VSI F  EHI +SP+ +
Sbjct: 781 EDRKDGSCGVSYVVQEPGDYEVSIKFNDEHIPDSPFVV 818
>sp|P58145|ROAA_ASTLO Ribosomal operon-associated A protein (RoaA)
          Length = 519

 Score = 32.7 bits (73), Expect = 1.3
 Identities = 22/90 (24%), Positives = 44/90 (48%), Gaps = 8/90 (8%)
 Frame = -1

Query: 825 NFYFNIFQYDLLIIIMSNEIKMSIF------NFRHFFIFSWMTIIIRN*IGSICCSNSL- 667
           NF++N+F Y++ II +S +    +F      N   F ++ ++ +   N + +     +L 
Sbjct: 96  NFFYNLFFYNIEIINLSFKFNFFLFYKFCFNNLVKFVMYPFLELKTENFVFNFNFYTNLY 155

Query: 666 -IIANFKQNSIRTIANMFS*KINTNSMRNY 580
            I  NFK+  ++    ++   IN N+  NY
Sbjct: 156 DIFLNFKKILLKNFMKLYYFTINFNNKFNY 185
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,344,485
Number of Sequences: 369166
Number of extensions: 1377215
Number of successful extensions: 4031
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3841
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4029
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8052550455
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)