Planaria EST Database


DrC_02876

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_02876
         (886 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P09572|AT1A1_CHICK  Sodium/potassium-transporting ATPase ...    33   1.1  
sp|P06685|AT1A1_RAT  Sodium/potassium-transporting ATPase al...    33   1.1  
sp|Q8VDN2|AT1A1_MOUSE  Sodium/potassium-transporting ATPase ...    33   1.1  
sp|P30714|AT1A1_BUFMA  Sodium/potassium-transporting ATPase ...    33   1.1  
sp|Q965T1|U197_CAEEL  Hypothetical UPF0197 protein Y57E12AM....    33   1.1  
sp|P50993|AT1A2_HUMAN  Sodium/potassium-transporting ATPase ...    33   1.4  
sp|P24797|AT1A2_CHICK  Sodium/potassium-transporting ATPase ...    33   1.4  
sp|P50997|AT1A1_CANFA  Sodium/potassium-transporting ATPase ...    32   1.8  
sp|Q9YH26|AT1A1_OREMO  Sodium/potassium-transporting ATPase ...    32   1.8  
sp|P13637|AT1A3_HUMAN  Sodium/potassium-transporting ATPase ...    32   1.8  
>sp|P09572|AT1A1_CHICK Sodium/potassium-transporting ATPase alpha-1 chain precursor
           (Sodium pump 1) (Na+/K+ ATPase 1)
          Length = 1021

 Score = 33.1 bits (74), Expect = 1.1
 Identities = 29/111 (26%), Positives = 48/111 (43%), Gaps = 2/111 (1%)
 Frame = +1

Query: 292 GGMTVVAGILGVVVGTESGRR-LRKIYPTADTLVCGVGLILSAPFFLVSLILAKYHYNWS 468
           G  TV+  I  +  G E G+  +         L+ GV + L   FF++SLIL    Y W 
Sbjct: 260 GDRTVMGRIASLASGLEGGKTPIAMEIEHFIHLITGVAVFLGVSFFILSLIL---EYTWL 316

Query: 469 LATIFITQTFLC-LNWALVTDMTMSVVIPSRRATASAYQMILSHAFGDAGS 618
            A IF+    +  +   L+  +T+ + + ++R       +    A G  GS
Sbjct: 317 EAVIFLIGIIVANVPEGLLATVTVCLTLTAKRMARKNCLVKNLEAVGTLGS 367
>sp|P06685|AT1A1_RAT Sodium/potassium-transporting ATPase alpha-1 chain precursor
           (Sodium pump 1) (Na+/K+ ATPase 1)
          Length = 1023

 Score = 33.1 bits (74), Expect = 1.1
 Identities = 29/113 (25%), Positives = 50/113 (44%), Gaps = 7/113 (6%)
 Frame = +1

Query: 244 SNNPKKSDSEHVEYIFGGMTVVAGILGVVVGTESGRRLRKIYPTADT------LVCGVGL 405
           S N  +  +  +    G  TV+  I  +  G E G+      P A+       L+ GV +
Sbjct: 246 STNCVEGTARGIVVYTGDRTVMGRIATLASGLEGGQT-----PIAEEIEHFIHLITGVAV 300

Query: 406 ILSAPFFLVSLILAKYHYNWSLATIFITQTFLC-LNWALVTDMTMSVVIPSRR 561
            L   FF++SLIL    Y W  A IF+    +  +   L+  +T+ + + ++R
Sbjct: 301 FLGVSFFILSLIL---EYTWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKR 350
>sp|Q8VDN2|AT1A1_MOUSE Sodium/potassium-transporting ATPase alpha-1 chain precursor
           (Sodium pump 1) (Na+/K+ ATPase 1)
          Length = 1023

 Score = 33.1 bits (74), Expect = 1.1
 Identities = 29/113 (25%), Positives = 50/113 (44%), Gaps = 7/113 (6%)
 Frame = +1

Query: 244 SNNPKKSDSEHVEYIFGGMTVVAGILGVVVGTESGRRLRKIYPTADT------LVCGVGL 405
           S N  +  +  +    G  TV+  I  +  G E G+      P A+       L+ GV +
Sbjct: 246 STNCVEGTARGIVVYTGDRTVMGRIATLASGLEGGQT-----PIAEEIEHFIHLITGVAV 300

Query: 406 ILSAPFFLVSLILAKYHYNWSLATIFITQTFLC-LNWALVTDMTMSVVIPSRR 561
            L   FF++SLIL    Y W  A IF+    +  +   L+  +T+ + + ++R
Sbjct: 301 FLGVSFFILSLIL---EYTWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKR 350
>sp|P30714|AT1A1_BUFMA Sodium/potassium-transporting ATPase alpha-1 chain precursor
           (Sodium pump 1) (Na+/K+ ATPase 1)
          Length = 1023

 Score = 33.1 bits (74), Expect = 1.1
 Identities = 27/97 (27%), Positives = 45/97 (46%), Gaps = 7/97 (7%)
 Frame = +1

Query: 292 GGMTVVAGILGVVVGTESGRRLRKIYPTADTL------VCGVGLILSAPFFLVSLILAKY 453
           G  TV+  I  +  G E G+      P A  +      + GV + L   FF++SLIL   
Sbjct: 262 GDRTVMGRIATLASGLEGGQT-----PIAVEIGHFIHIITGVAVFLGVSFFILSLIL--- 313

Query: 454 HYNWSLATIFITQTFLC-LNWALVTDMTMSVVIPSRR 561
           HY W  A IF+    +  +   L+  +T+ + + ++R
Sbjct: 314 HYTWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKR 350
>sp|Q965T1|U197_CAEEL Hypothetical UPF0197 protein Y57E12AM.1 in chromosom V
          Length = 79

 Score = 33.1 bits (74), Expect = 1.1
 Identities = 17/42 (40%), Positives = 24/42 (57%)
 Frame = +1

Query: 370 PTADTLVCGVGLILSAPFFLVSLILAKYHYNWSLATIFITQT 495
           P   T +CGVGL+L A F ++ +   KY+ N  L  +FI  T
Sbjct: 19  PLLTTFLCGVGLLLLATFTMIQVTSTKYNRN-LLKELFIAAT 59
>sp|P50993|AT1A2_HUMAN Sodium/potassium-transporting ATPase alpha-2 chain precursor
           (Sodium pump 2) (Na+/K+ ATPase 2)
          Length = 1020

 Score = 32.7 bits (73), Expect = 1.4
 Identities = 28/108 (25%), Positives = 49/108 (45%), Gaps = 2/108 (1%)
 Frame = +1

Query: 244 SNNPKKSDSEHVEYIFGGMTVVAGILGVVVGTESGRR-LRKIYPTADTLVCGVGLILSAP 420
           S N  +  +  +    G  TV+  I  +  G E GR  +         L+ GV + L   
Sbjct: 244 STNCVEGTARGIVIATGDRTVMGRIATLASGLEVGRTPIAMEIEHFIQLITGVAVFLGVS 303

Query: 421 FFLVSLILAKYHYNWSLATIFITQTFLC-LNWALVTDMTMSVVIPSRR 561
           FF++SLIL    Y+W  A IF+    +  +   L+  +T+ + + ++R
Sbjct: 304 FFVLSLILG---YSWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKR 348
>sp|P24797|AT1A2_CHICK Sodium/potassium-transporting ATPase alpha-2 chain (Sodium pump 2)
           (Na+/K+ ATPase 2)
          Length = 1017

 Score = 32.7 bits (73), Expect = 1.4
 Identities = 26/92 (28%), Positives = 43/92 (46%), Gaps = 2/92 (2%)
 Frame = +1

Query: 292 GGMTVVAGILGVVVGTESGRR-LRKIYPTADTLVCGVGLILSAPFFLVSLILAKYHYNWS 468
           G  TV+  I  +  G E GR  +         L+ GV + L   FF++SLIL    Y W 
Sbjct: 257 GDRTVMGRIASLASGLEVGRTPIAMEIEHFIRLITGVAVFLGLSFFILSLILG---YTWL 313

Query: 469 LATIFITQTFLC-LNWALVTDMTMSVVIPSRR 561
            A IF+    +  +   L+  +T+ + + ++R
Sbjct: 314 EAVIFLIGIIVANVPEGLLATVTVCLTLTAKR 345
>sp|P50997|AT1A1_CANFA Sodium/potassium-transporting ATPase alpha-1 chain precursor
           (Sodium pump 1) (Na+/K+ ATPase 1)
          Length = 1021

 Score = 32.3 bits (72), Expect = 1.8
 Identities = 29/113 (25%), Positives = 49/113 (43%), Gaps = 7/113 (6%)
 Frame = +1

Query: 244 SNNPKKSDSEHVEYIFGGMTVVAGILGVVVGTESGRRLRKIYPTADTL------VCGVGL 405
           S N  K  +  +    G  TV+  I  +  G E G+      P A  +      + GV +
Sbjct: 244 STNCVKGTARGIVVYTGDRTVMGRIATLASGLEGGQT-----PIAAEIEHFIHIITGVAV 298

Query: 406 ILSAPFFLVSLILAKYHYNWSLATIFITQTFLC-LNWALVTDMTMSVVIPSRR 561
            L   FF++SLIL    Y W  A IF+    +  +   L+  +T+ + + ++R
Sbjct: 299 FLGVSFFILSLIL---EYTWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKR 348
>sp|Q9YH26|AT1A1_OREMO Sodium/potassium-transporting ATPase alpha-1 chain precursor
           (Sodium pump 1) (Na+/K+ ATPase 1)
          Length = 1023

 Score = 32.3 bits (72), Expect = 1.8
 Identities = 25/98 (25%), Positives = 44/98 (44%), Gaps = 18/98 (18%)
 Frame = +1

Query: 322 GVVVGTESGRRLRKIYPTADTL-----------------VCGVGLILSAPFFLVSLILAK 450
           G+V+ TE    + +I   A +L                 + GV + L   FF++SLIL  
Sbjct: 256 GIVINTEDRTVMGRIATLASSLEGGKTPIAIEIEHFIHIITGVAVFLGVSFFILSLILG- 314

Query: 451 YHYNWSLATIFITQTFLC-LNWALVTDMTMSVVIPSRR 561
             YNW  A IF+    +  +   L+  +T+ + + ++R
Sbjct: 315 --YNWLEAVIFLIGIIVANVPEGLLATVTVCLTLTAKR 350
>sp|P13637|AT1A3_HUMAN Sodium/potassium-transporting ATPase alpha-3 chain (Sodium pump 3)
           (Na+/K+ ATPase 3) (Alpha(III))
          Length = 1013

 Score = 32.3 bits (72), Expect = 1.8
 Identities = 29/108 (26%), Positives = 48/108 (44%), Gaps = 2/108 (1%)
 Frame = +1

Query: 244 SNNPKKSDSEHVEYIFGGMTVVAGILGVVVGTESGRRLRKI-YPTADTLVCGVGLILSAP 420
           S N  +  +  V    G  TV+  I  +  G E G+    I       L+ GV + L   
Sbjct: 236 STNCVEGTARGVVVATGDRTVMGRIATLASGLEVGKTPIAIEIEHFIQLITGVAVFLGVS 295

Query: 421 FFLVSLILAKYHYNWSLATIFITQTFLC-LNWALVTDMTMSVVIPSRR 561
           FF++SLIL    Y W  A IF+    +  +   L+  +T+ + + ++R
Sbjct: 296 FFILSLILG---YTWLEAVIFLIGIIVANVPEGLLATVTVCLTVTAKR 340
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 109,693,343
Number of Sequences: 369166
Number of extensions: 2323905
Number of successful extensions: 6754
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6336
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6752
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 8838279920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)