Planaria EST Database


DrC_02859

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_02859
         (333 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P49597|PP2C1_ARATH  Protein phosphatase 2C ABI1 (PP2C) (A...    65   6e-11
sp|O62829|PP2CA_BOVIN  Protein phosphatase 2C alpha isoform ...    65   6e-11
sp|P35814|PP2CA_RABIT  Protein phosphatase 2C alpha isoform ...    64   8e-11
sp|P49443|PP2CA_MOUSE  Protein phosphatase 2C alpha isoform ...    64   8e-11
sp|P20650|PP2CA_RAT  Protein phosphatase 2C alpha isoform (P...    64   8e-11
sp|P35813|PP2CA_HUMAN  Protein phosphatase 2C alpha isoform ...    64   8e-11
sp|P49595|PP2C1_CAEEL  Probable protein phosphatase 2C F42G9...    64   1e-10
sp|P39966|PP2C2_YEAST  Protein phosphatase 2C homolog 2 (PP2...    64   1e-10
sp|P40371|PP2C1_SCHPO  Protein phosphatase 2C homolog 1 (PP2...    63   2e-10
sp|O04719|PP2C2_ARATH  Protein phosphatase 2C ABI2 (PP2C) (A...    62   3e-10
>sp|P49597|PP2C1_ARATH Protein phosphatase 2C ABI1 (PP2C) (Abscisic acid-insensitive 1)
          Length = 434

 Score = 64.7 bits (156), Expect = 6e-11
 Identities = 45/101 (44%), Positives = 58/101 (57%), Gaps = 1/101 (0%)
 Frame = +2

Query: 26  LVVASVGDSRAILCRSGNAMALSTDDDPGNESEQSRIYKCGG-VITTNSLGVPVVNGRLG 202
           + VA+ GDSRA+LCR   A+ LS D  P  E E +RI   GG VI  N      V G L 
Sbjct: 254 IFVANCGDSRAVLCRGKTALPLSVDHKPDREDEAARIEAAGGKVIQWNGAR---VFGVLA 310

Query: 203 MTRSLGDFELKKYGVIPNPHLYDIKISHAKDAFMILISDGV 325
           M+RS+GD  LK   +IP+P +  +K    +D  +IL SDGV
Sbjct: 311 MSRSIGDRYLKP-SIIPDPEVTAVK-RVKEDDCLILASDGV 349
>sp|O62829|PP2CA_BOVIN Protein phosphatase 2C alpha isoform (PP2C-alpha)
          Length = 382

 Score = 64.7 bits (156), Expect = 6e-11
 Identities = 38/102 (37%), Positives = 54/102 (52%), Gaps = 8/102 (7%)
 Frame = +2

Query: 44  GDSRAILCRSGNAMALSTDDDPGNESEQSRIYKCGGVITTNSLGVPVVNGRLGMTRSLGD 223
           GDSR +LCR+      + D  P N  E+ RI   GG     S+ +  VNG L ++R+LGD
Sbjct: 145 GDSRGLLCRNRKVYFFTQDHKPSNPLEKERIQNAGG-----SVMIQRVNGSLAVSRALGD 199

Query: 224 FELK--------KYGVIPNPHLYDIKISHAKDAFMILISDGV 325
           F+ K        +  V P P ++DI+ S   D F+IL  DG+
Sbjct: 200 FDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGI 241
>sp|P35814|PP2CA_RABIT Protein phosphatase 2C alpha isoform (PP2C-alpha) (IA) (Protein
           phosphatase 1A)
          Length = 382

 Score = 64.3 bits (155), Expect = 8e-11
 Identities = 38/102 (37%), Positives = 54/102 (52%), Gaps = 8/102 (7%)
 Frame = +2

Query: 44  GDSRAILCRSGNAMALSTDDDPGNESEQSRIYKCGGVITTNSLGVPVVNGRLGMTRSLGD 223
           GDSR +LCR+      + D  P N  E+ RI   GG     S+ +  VNG L ++R+LGD
Sbjct: 145 GDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNAGG-----SVMIQRVNGSLAVSRALGD 199

Query: 224 FELK--------KYGVIPNPHLYDIKISHAKDAFMILISDGV 325
           F+ K        +  V P P ++DI+ S   D F+IL  DG+
Sbjct: 200 FDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGI 241
>sp|P49443|PP2CA_MOUSE Protein phosphatase 2C alpha isoform (PP2C-alpha) (IA) (Protein
           phosphatase 1A)
          Length = 382

 Score = 64.3 bits (155), Expect = 8e-11
 Identities = 38/102 (37%), Positives = 54/102 (52%), Gaps = 8/102 (7%)
 Frame = +2

Query: 44  GDSRAILCRSGNAMALSTDDDPGNESEQSRIYKCGGVITTNSLGVPVVNGRLGMTRSLGD 223
           GDSR +LCR+      + D  P N  E+ RI   GG     S+ +  VNG L ++R+LGD
Sbjct: 145 GDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNAGG-----SVMIQRVNGSLAVSRALGD 199

Query: 224 FELK--------KYGVIPNPHLYDIKISHAKDAFMILISDGV 325
           F+ K        +  V P P ++DI+ S   D F+IL  DG+
Sbjct: 200 FDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGI 241
>sp|P20650|PP2CA_RAT Protein phosphatase 2C alpha isoform (PP2C-alpha) (IA) (Protein
           phosphatase 1A)
          Length = 382

 Score = 64.3 bits (155), Expect = 8e-11
 Identities = 38/102 (37%), Positives = 54/102 (52%), Gaps = 8/102 (7%)
 Frame = +2

Query: 44  GDSRAILCRSGNAMALSTDDDPGNESEQSRIYKCGGVITTNSLGVPVVNGRLGMTRSLGD 223
           GDSR +LCR+      + D  P N  E+ RI   GG     S+ +  VNG L ++R+LGD
Sbjct: 145 GDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNAGG-----SVMIQRVNGSLAVSRALGD 199

Query: 224 FELK--------KYGVIPNPHLYDIKISHAKDAFMILISDGV 325
           F+ K        +  V P P ++DI+ S   D F+IL  DG+
Sbjct: 200 FDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGI 241
>sp|P35813|PP2CA_HUMAN Protein phosphatase 2C alpha isoform (PP2C-alpha) (IA) (Protein
           phosphatase 1A)
          Length = 382

 Score = 64.3 bits (155), Expect = 8e-11
 Identities = 38/102 (37%), Positives = 54/102 (52%), Gaps = 8/102 (7%)
 Frame = +2

Query: 44  GDSRAILCRSGNAMALSTDDDPGNESEQSRIYKCGGVITTNSLGVPVVNGRLGMTRSLGD 223
           GDSR +LCR+      + D  P N  E+ RI   GG     S+ +  VNG L ++R+LGD
Sbjct: 145 GDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNAGG-----SVMIQRVNGSLAVSRALGD 199

Query: 224 FELK--------KYGVIPNPHLYDIKISHAKDAFMILISDGV 325
           F+ K        +  V P P ++DI+ S   D F+IL  DG+
Sbjct: 200 FDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGI 241
>sp|P49595|PP2C1_CAEEL Probable protein phosphatase 2C F42G9.1 (PP2C)
          Length = 491

 Score = 63.9 bits (154), Expect = 1e-10
 Identities = 40/108 (37%), Positives = 60/108 (55%), Gaps = 7/108 (6%)
 Frame = +2

Query: 23  ELVVASVGDSRAILCRSGNAMALSTDDDPGNESEQSRIYKCGGVITTNSLGVPVVNGRLG 202
           +++VA+ GDSRA+LCR+G A+ LS D  P +E E +RI+  GG I         VNG L 
Sbjct: 328 KVIVANAGDSRAVLCRNGKAVDLSVDHKPEDEVETNRIHAAGGQIEDGR-----VNGGLN 382

Query: 203 MTRSLGDFELKKYGVIPNPH-----LYDIKIS--HAKDAFMILISDGV 325
           ++R+ GD   KK   +         L D+KI     +D F+++  DG+
Sbjct: 383 LSRAFGDHAYKKNQELGLKEQMITALPDVKIEALTPEDEFIVVACDGI 430
>sp|P39966|PP2C2_YEAST Protein phosphatase 2C homolog 2 (PP2C-2)
          Length = 464

 Score = 63.9 bits (154), Expect = 1e-10
 Identities = 41/108 (37%), Positives = 57/108 (52%), Gaps = 8/108 (7%)
 Frame = +2

Query: 26  LVVASVGDSRAILCRSGNAMALSTDDDPGNESEQSRIYKCGGVITTNSLGVPVVNGRLGM 205
           LV  + GDSR +L   GNA ALS D  P   SE+SRI    G +  +      VNG L +
Sbjct: 134 LVCGNAGDSRTVLATDGNAKALSYDHKPTLASEKSRIVAADGFVEMDR-----VNGNLAL 188

Query: 206 TRSLGDFELK---KYG-----VIPNPHLYDIKISHAKDAFMILISDGV 325
           +R++GDFE K   K G     V   P + +  + + +D F+IL  DG+
Sbjct: 189 SRAIGDFEFKSNPKLGPEEQIVTCVPDILEHSLDYDRDEFVILACDGI 236
>sp|P40371|PP2C1_SCHPO Protein phosphatase 2C homolog 1 (PP2C-1)
          Length = 347

 Score = 62.8 bits (151), Expect = 2e-10
 Identities = 36/100 (36%), Positives = 56/100 (56%)
 Frame = +2

Query: 26  LVVASVGDSRAILCRSGNAMALSTDDDPGNESEQSRIYKCGGVITTNSLGVPVVNGRLGM 205
           L  A+ GD+R +LCR G A+ LS D    + +E  R+ + GG++  N      +NG L +
Sbjct: 184 LYTANAGDARIVLCRDGKAIRLSYDHKGSDANESRRVTQLGGLMVQNR-----INGVLAV 238

Query: 206 TRSLGDFELKKYGVIPNPHLYDIKISHAKDAFMILISDGV 325
           TR+LGD  LK+  V  +P   + +I +  D F I+  DG+
Sbjct: 239 TRALGDTYLKEL-VSAHPFTTETRIWNGHDEFFIIACDGL 277
>sp|O04719|PP2C2_ARATH Protein phosphatase 2C ABI2 (PP2C) (Abscisic acid-insensitive 2)
          Length = 423

 Score = 62.4 bits (150), Expect = 3e-10
 Identities = 43/101 (42%), Positives = 58/101 (57%), Gaps = 1/101 (0%)
 Frame = +2

Query: 26  LVVASVGDSRAILCRSGNAMALSTDDDPGNESEQSRIYKCGG-VITTNSLGVPVVNGRLG 202
           + VA+ GDSRA+LCR    +ALS D  P  + E +RI   GG VI  N      V G L 
Sbjct: 244 IFVANCGDSRAVLCRGKTPLALSVDHKPDRDDEAARIEAAGGKVIRWNGAR---VFGVLA 300

Query: 203 MTRSLGDFELKKYGVIPNPHLYDIKISHAKDAFMILISDGV 325
           M+RS+GD  LK   VIP+P +  ++    +D  +IL SDG+
Sbjct: 301 MSRSIGDRYLKP-SVIPDPEVTSVR-RVKEDDCLILASDGL 339
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,452,588
Number of Sequences: 369166
Number of extensions: 781940
Number of successful extensions: 2059
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2004
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2029
length of database: 68,354,980
effective HSP length: 78
effective length of database: 53,945,650
effective search space used: 1726260800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)