Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_026_D01
(333 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P49597|PP2C1_ARATH Protein phosphatase 2C ABI1 (PP2C) (A... 65 6e-11
sp|O62829|PP2CA_BOVIN Protein phosphatase 2C alpha isoform ... 65 6e-11
sp|P35814|PP2CA_RABIT Protein phosphatase 2C alpha isoform ... 64 8e-11
sp|P49443|PP2CA_MOUSE Protein phosphatase 2C alpha isoform ... 64 8e-11
sp|P20650|PP2CA_RAT Protein phosphatase 2C alpha isoform (P... 64 8e-11
sp|P35813|PP2CA_HUMAN Protein phosphatase 2C alpha isoform ... 64 8e-11
sp|P49595|PP2C1_CAEEL Probable protein phosphatase 2C F42G9... 64 1e-10
sp|P39966|PP2C2_YEAST Protein phosphatase 2C homolog 2 (PP2... 64 1e-10
sp|P40371|PP2C1_SCHPO Protein phosphatase 2C homolog 1 (PP2... 63 2e-10
sp|O04719|PP2C2_ARATH Protein phosphatase 2C ABI2 (PP2C) (A... 62 3e-10
>sp|P49597|PP2C1_ARATH Protein phosphatase 2C ABI1 (PP2C) (Abscisic acid-insensitive 1)
Length = 434
Score = 64.7 bits (156), Expect = 6e-11
Identities = 45/101 (44%), Positives = 58/101 (57%), Gaps = 1/101 (0%)
Frame = +2
Query: 26 LVVASVGDSRAILCRSGNAMALSTDDDPGNESEQSRIYKCGG-VITTNSLGVPVVNGRLG 202
+ VA+ GDSRA+LCR A+ LS D P E E +RI GG VI N V G L
Sbjct: 254 IFVANCGDSRAVLCRGKTALPLSVDHKPDREDEAARIEAAGGKVIQWNGAR---VFGVLA 310
Query: 203 MTRSLGDFELKKYGVIPNPHLYDIKISHAKDAFMILISDGV 325
M+RS+GD LK +IP+P + +K +D +IL SDGV
Sbjct: 311 MSRSIGDRYLKP-SIIPDPEVTAVK-RVKEDDCLILASDGV 349
>sp|O62829|PP2CA_BOVIN Protein phosphatase 2C alpha isoform (PP2C-alpha)
Length = 382
Score = 64.7 bits (156), Expect = 6e-11
Identities = 38/102 (37%), Positives = 54/102 (52%), Gaps = 8/102 (7%)
Frame = +2
Query: 44 GDSRAILCRSGNAMALSTDDDPGNESEQSRIYKCGGVITTNSLGVPVVNGRLGMTRSLGD 223
GDSR +LCR+ + D P N E+ RI GG S+ + VNG L ++R+LGD
Sbjct: 145 GDSRGLLCRNRKVYFFTQDHKPSNPLEKERIQNAGG-----SVMIQRVNGSLAVSRALGD 199
Query: 224 FELK--------KYGVIPNPHLYDIKISHAKDAFMILISDGV 325
F+ K + V P P ++DI+ S D F+IL DG+
Sbjct: 200 FDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGI 241
>sp|P35814|PP2CA_RABIT Protein phosphatase 2C alpha isoform (PP2C-alpha) (IA) (Protein
phosphatase 1A)
Length = 382
Score = 64.3 bits (155), Expect = 8e-11
Identities = 38/102 (37%), Positives = 54/102 (52%), Gaps = 8/102 (7%)
Frame = +2
Query: 44 GDSRAILCRSGNAMALSTDDDPGNESEQSRIYKCGGVITTNSLGVPVVNGRLGMTRSLGD 223
GDSR +LCR+ + D P N E+ RI GG S+ + VNG L ++R+LGD
Sbjct: 145 GDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNAGG-----SVMIQRVNGSLAVSRALGD 199
Query: 224 FELK--------KYGVIPNPHLYDIKISHAKDAFMILISDGV 325
F+ K + V P P ++DI+ S D F+IL DG+
Sbjct: 200 FDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGI 241
>sp|P49443|PP2CA_MOUSE Protein phosphatase 2C alpha isoform (PP2C-alpha) (IA) (Protein
phosphatase 1A)
Length = 382
Score = 64.3 bits (155), Expect = 8e-11
Identities = 38/102 (37%), Positives = 54/102 (52%), Gaps = 8/102 (7%)
Frame = +2
Query: 44 GDSRAILCRSGNAMALSTDDDPGNESEQSRIYKCGGVITTNSLGVPVVNGRLGMTRSLGD 223
GDSR +LCR+ + D P N E+ RI GG S+ + VNG L ++R+LGD
Sbjct: 145 GDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNAGG-----SVMIQRVNGSLAVSRALGD 199
Query: 224 FELK--------KYGVIPNPHLYDIKISHAKDAFMILISDGV 325
F+ K + V P P ++DI+ S D F+IL DG+
Sbjct: 200 FDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGI 241
>sp|P20650|PP2CA_RAT Protein phosphatase 2C alpha isoform (PP2C-alpha) (IA) (Protein
phosphatase 1A)
Length = 382
Score = 64.3 bits (155), Expect = 8e-11
Identities = 38/102 (37%), Positives = 54/102 (52%), Gaps = 8/102 (7%)
Frame = +2
Query: 44 GDSRAILCRSGNAMALSTDDDPGNESEQSRIYKCGGVITTNSLGVPVVNGRLGMTRSLGD 223
GDSR +LCR+ + D P N E+ RI GG S+ + VNG L ++R+LGD
Sbjct: 145 GDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNAGG-----SVMIQRVNGSLAVSRALGD 199
Query: 224 FELK--------KYGVIPNPHLYDIKISHAKDAFMILISDGV 325
F+ K + V P P ++DI+ S D F+IL DG+
Sbjct: 200 FDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGI 241
>sp|P35813|PP2CA_HUMAN Protein phosphatase 2C alpha isoform (PP2C-alpha) (IA) (Protein
phosphatase 1A)
Length = 382
Score = 64.3 bits (155), Expect = 8e-11
Identities = 38/102 (37%), Positives = 54/102 (52%), Gaps = 8/102 (7%)
Frame = +2
Query: 44 GDSRAILCRSGNAMALSTDDDPGNESEQSRIYKCGGVITTNSLGVPVVNGRLGMTRSLGD 223
GDSR +LCR+ + D P N E+ RI GG S+ + VNG L ++R+LGD
Sbjct: 145 GDSRGLLCRNRKVHFFTQDHKPSNPLEKERIQNAGG-----SVMIQRVNGSLAVSRALGD 199
Query: 224 FELK--------KYGVIPNPHLYDIKISHAKDAFMILISDGV 325
F+ K + V P P ++DI+ S D F+IL DG+
Sbjct: 200 FDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGI 241
>sp|P49595|PP2C1_CAEEL Probable protein phosphatase 2C F42G9.1 (PP2C)
Length = 491
Score = 63.9 bits (154), Expect = 1e-10
Identities = 40/108 (37%), Positives = 60/108 (55%), Gaps = 7/108 (6%)
Frame = +2
Query: 23 ELVVASVGDSRAILCRSGNAMALSTDDDPGNESEQSRIYKCGGVITTNSLGVPVVNGRLG 202
+++VA+ GDSRA+LCR+G A+ LS D P +E E +RI+ GG I VNG L
Sbjct: 328 KVIVANAGDSRAVLCRNGKAVDLSVDHKPEDEVETNRIHAAGGQIEDGR-----VNGGLN 382
Query: 203 MTRSLGDFELKKYGVIPNPH-----LYDIKIS--HAKDAFMILISDGV 325
++R+ GD KK + L D+KI +D F+++ DG+
Sbjct: 383 LSRAFGDHAYKKNQELGLKEQMITALPDVKIEALTPEDEFIVVACDGI 430
>sp|P39966|PP2C2_YEAST Protein phosphatase 2C homolog 2 (PP2C-2)
Length = 464
Score = 63.9 bits (154), Expect = 1e-10
Identities = 41/108 (37%), Positives = 57/108 (52%), Gaps = 8/108 (7%)
Frame = +2
Query: 26 LVVASVGDSRAILCRSGNAMALSTDDDPGNESEQSRIYKCGGVITTNSLGVPVVNGRLGM 205
LV + GDSR +L GNA ALS D P SE+SRI G + + VNG L +
Sbjct: 134 LVCGNAGDSRTVLATDGNAKALSYDHKPTLASEKSRIVAADGFVEMDR-----VNGNLAL 188
Query: 206 TRSLGDFELK---KYG-----VIPNPHLYDIKISHAKDAFMILISDGV 325
+R++GDFE K K G V P + + + + +D F+IL DG+
Sbjct: 189 SRAIGDFEFKSNPKLGPEEQIVTCVPDILEHSLDYDRDEFVILACDGI 236
>sp|P40371|PP2C1_SCHPO Protein phosphatase 2C homolog 1 (PP2C-1)
Length = 347
Score = 62.8 bits (151), Expect = 2e-10
Identities = 36/100 (36%), Positives = 56/100 (56%)
Frame = +2
Query: 26 LVVASVGDSRAILCRSGNAMALSTDDDPGNESEQSRIYKCGGVITTNSLGVPVVNGRLGM 205
L A+ GD+R +LCR G A+ LS D + +E R+ + GG++ N +NG L +
Sbjct: 184 LYTANAGDARIVLCRDGKAIRLSYDHKGSDANESRRVTQLGGLMVQNR-----INGVLAV 238
Query: 206 TRSLGDFELKKYGVIPNPHLYDIKISHAKDAFMILISDGV 325
TR+LGD LK+ V +P + +I + D F I+ DG+
Sbjct: 239 TRALGDTYLKEL-VSAHPFTTETRIWNGHDEFFIIACDGL 277
>sp|O04719|PP2C2_ARATH Protein phosphatase 2C ABI2 (PP2C) (Abscisic acid-insensitive 2)
Length = 423
Score = 62.4 bits (150), Expect = 3e-10
Identities = 43/101 (42%), Positives = 58/101 (57%), Gaps = 1/101 (0%)
Frame = +2
Query: 26 LVVASVGDSRAILCRSGNAMALSTDDDPGNESEQSRIYKCGG-VITTNSLGVPVVNGRLG 202
+ VA+ GDSRA+LCR +ALS D P + E +RI GG VI N V G L
Sbjct: 244 IFVANCGDSRAVLCRGKTPLALSVDHKPDRDDEAARIEAAGGKVIRWNGAR---VFGVLA 300
Query: 203 MTRSLGDFELKKYGVIPNPHLYDIKISHAKDAFMILISDGV 325
M+RS+GD LK VIP+P + ++ +D +IL SDG+
Sbjct: 301 MSRSIGDRYLKP-SVIPDPEVTSVR-RVKEDDCLILASDGL 339
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,452,588
Number of Sequences: 369166
Number of extensions: 781940
Number of successful extensions: 2059
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2004
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2029
length of database: 68,354,980
effective HSP length: 78
effective length of database: 53,945,650
effective search space used: 1726260800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)