Planaria EST Database


DrC_02845

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_02845
         (911 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9DE26|RUVB1_XENLA  RuvB-like 1 (Pontin)                       501   e-141
sp|P60123|RUVB1_RAT  RuvB-like 1 (49-kDa TATA box-binding pr...   500   e-141
sp|Q9Y265|RUVB1_HUMAN  RuvB-like 1 (49-kDa TATA box-binding ...   499   e-141
sp|Q8AWW7|RUVB1_BRARE  RuvB-like 1 (Pontin) (zPontin)             499   e-141
sp|Q03940|RUVB1_YEAST  RuvB-like protein 1 (RUVBL1) (TIP49a ...   461   e-129
sp|Q9DE27|RUVB2_XENLA  RuvB-like 2 (Reptin)                       253   4e-67
sp|P83571|RUVB2_BRARE  RuvB-like 2 (Reptin) (zReptin)             252   1e-66
sp|Q9WTM5|RUVB2_MOUSE  RuvB-like 2 (p47 protein)                  248   2e-65
sp|Q9Y230|RUVB2_HUMAN  RuvB-like 2 (48-kDa TATA box-binding ...   248   2e-65
sp|Q12464|RUVB2_YEAST  RuvB-like protein 2 (RUVBL2) (TIP49b ...   236   9e-62
>sp|Q9DE26|RUVB1_XENLA RuvB-like 1 (Pontin)
          Length = 456

 Score =  501 bits (1289), Expect = e-141
 Identities = 248/302 (82%), Positives = 275/302 (91%)
 Frame = +1

Query: 1   AREAAGVITEMIKAKKLAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSS 180
           AREA GVI E+IK+KK+AGRAVLLAGPPGTGKTALALAIAQELG+KVPFCPMVGSEVYS+
Sbjct: 45  AREACGVIVELIKSKKMAGRAVLLAGPPGTGKTALALAIAQELGNKVPFCPMVGSEVYST 104

Query: 181 EIKKTEVLMENFRRAIGLRIKEVKEVYEGEVTEITPVQADNPSSSYGKTISHVMICLKTA 360
           EIKKTEVLMENFRRAIGLRI+E KEVYEGEVTE+TP + +NP   YGKTISHV+I LKTA
Sbjct: 105 EIKKTEVLMENFRRAIGLRIRETKEVYEGEVTELTPCETENPMGGYGKTISHVIIGLKTA 164

Query: 361 KGTKSLKMDPLIYENLQKEKVEVGDVIYIEVSSGAVKRQGRSDAYANEYDLEADEYVPLP 540
           KGTK LK+DP IYE+LQKE+VEVGDVIYIE +SGAVKRQGRSD YA E+DLEA+EYVPLP
Sbjct: 165 KGTKQLKLDPSIYESLQKERVEVGDVIYIEANSGAVKRQGRSDTYATEFDLEAEEYVPLP 224

Query: 541 KGDAHKKKEVVQDVTLHDLDVANAYPQGGQDIASMMGQLMKQKKTEITDKLRRDIDKIVN 720
           KGD H+KKEV+QDVTLHDLDVANA PQGGQDI SMMGQLMK KKTEITDKLR  I+K+VN
Sbjct: 225 KGDVHQKKEVIQDVTLHDLDVANARPQGGQDILSMMGQLMKPKKTEITDKLRGQINKVVN 284

Query: 721 KYIDQGTAELVPGVLFIDEVHMLDLECFTYLSRALEYSIAPIVIFATNRGVCTVKGADEL 900
           KYIDQG AELVPGVLFIDEVHMLD+ECFTYL RALE S+APIVIFATNRG C ++G +++
Sbjct: 285 KYIDQGIAELVPGVLFIDEVHMLDIECFTYLHRALESSLAPIVIFATNRGNCIIRGTEDV 344

Query: 901 KS 906
            S
Sbjct: 345 AS 346
>sp|P60123|RUVB1_RAT RuvB-like 1 (49-kDa TATA box-binding protein-interacting protein)
           (49 kDa TBP-interacting protein) (TIP49a) (Pontin 52)
           (DNA helicase p50)
 sp|P60122|RUVB1_MOUSE RuvB-like 1 (49-kDa TATA box-binding protein-interacting protein)
           (49 kDa TBP-interacting protein) (TIP49a) (Pontin 52)
           (DNA helicase p50)
          Length = 456

 Score =  500 bits (1287), Expect = e-141
 Identities = 246/302 (81%), Positives = 274/302 (90%)
 Frame = +1

Query: 1   AREAAGVITEMIKAKKLAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSS 180
           AREA GVI E+IK+KK+AGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYS+
Sbjct: 45  AREACGVIVELIKSKKMAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYST 104

Query: 181 EIKKTEVLMENFRRAIGLRIKEVKEVYEGEVTEITPVQADNPSSSYGKTISHVMICLKTA 360
           EIKKTEVLMENFRRAIGLRIKE KEVYEGEVTE+TP + +NP   YGKTISHV+I LKTA
Sbjct: 105 EIKKTEVLMENFRRAIGLRIKETKEVYEGEVTELTPCETENPMGGYGKTISHVIIGLKTA 164

Query: 361 KGTKSLKMDPLIYENLQKEKVEVGDVIYIEVSSGAVKRQGRSDAYANEYDLEADEYVPLP 540
           KGTK LK+DP I+E+LQKE+VE GDVIYIE +SGAVKRQGR D YA E+DLEA+EYVPLP
Sbjct: 165 KGTKQLKLDPSIFESLQKERVEAGDVIYIEANSGAVKRQGRCDTYATEFDLEAEEYVPLP 224

Query: 541 KGDAHKKKEVVQDVTLHDLDVANAYPQGGQDIASMMGQLMKQKKTEITDKLRRDIDKIVN 720
           KGD HKKKE++QDVTLHDLDVANA PQGGQDI SMMGQLMK KKTEITDKLR +I+K+VN
Sbjct: 225 KGDVHKKKEIIQDVTLHDLDVANARPQGGQDILSMMGQLMKPKKTEITDKLRGEINKVVN 284

Query: 721 KYIDQGTAELVPGVLFIDEVHMLDLECFTYLSRALEYSIAPIVIFATNRGVCTVKGADEL 900
           KYIDQG AELVPGVLF+DEVHMLD+ECFTYL RALE SIAPIVIFA+NRG C ++G +++
Sbjct: 285 KYIDQGVAELVPGVLFVDEVHMLDIECFTYLHRALESSIAPIVIFASNRGNCVIRGTEDI 344

Query: 901 KS 906
            S
Sbjct: 345 TS 346
>sp|Q9Y265|RUVB1_HUMAN RuvB-like 1 (49-kDa TATA box-binding protein-interacting protein)
           (49 kDa TBP-interacting protein) (TIP49a) (Pontin 52)
           (Nuclear matrix protein 238) (NMP 238) (54 kDa
           erythrocyte cytosolic protein) (ECP-54)
           (TIP60-associated protein 54-alpha) (TAP54-alpha)
          Length = 456

 Score =  499 bits (1286), Expect = e-141
 Identities = 246/302 (81%), Positives = 274/302 (90%)
 Frame = +1

Query: 1   AREAAGVITEMIKAKKLAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSS 180
           AREA GVI E+IK+KK+AGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYS+
Sbjct: 45  AREACGVIVELIKSKKMAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYST 104

Query: 181 EIKKTEVLMENFRRAIGLRIKEVKEVYEGEVTEITPVQADNPSSSYGKTISHVMICLKTA 360
           EIKKTEVLMENFRRAIGLRIKE KEVYEGEVTE+TP + +NP   YGKTISHV+I LKTA
Sbjct: 105 EIKKTEVLMENFRRAIGLRIKETKEVYEGEVTELTPCETENPMGGYGKTISHVIIGLKTA 164

Query: 361 KGTKSLKMDPLIYENLQKEKVEVGDVIYIEVSSGAVKRQGRSDAYANEYDLEADEYVPLP 540
           KGTK LK+DP I+E+LQKE+VE GDVIYIE +SGAVKRQGR D YA E+DLEA+EYVPLP
Sbjct: 165 KGTKQLKLDPSIFESLQKERVEAGDVIYIEANSGAVKRQGRCDTYATEFDLEAEEYVPLP 224

Query: 541 KGDAHKKKEVVQDVTLHDLDVANAYPQGGQDIASMMGQLMKQKKTEITDKLRRDIDKIVN 720
           KGD HKKKE++QDVTLHDLDVANA PQGGQDI SMMGQLMK KKTEITDKLR +I+K+VN
Sbjct: 225 KGDVHKKKEIIQDVTLHDLDVANARPQGGQDILSMMGQLMKPKKTEITDKLRGEINKVVN 284

Query: 721 KYIDQGTAELVPGVLFIDEVHMLDLECFTYLSRALEYSIAPIVIFATNRGVCTVKGADEL 900
           KYIDQG AELVPGVLF+DEVHMLD+ECFTYL RALE SIAPIVIFA+NRG C ++G +++
Sbjct: 285 KYIDQGIAELVPGVLFVDEVHMLDIECFTYLHRALESSIAPIVIFASNRGNCVIRGTEDI 344

Query: 901 KS 906
            S
Sbjct: 345 TS 346
>sp|Q8AWW7|RUVB1_BRARE RuvB-like 1 (Pontin) (zPontin)
          Length = 456

 Score =  499 bits (1284), Expect = e-141
 Identities = 243/302 (80%), Positives = 276/302 (91%)
 Frame = +1

Query: 1   AREAAGVITEMIKAKKLAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSS 180
           AREA G+ITE+I++KK+AGRA+LLAGPPGTGKTALALA+AQELG+KVPFCPMVGSEVYSS
Sbjct: 45  AREACGIITELIRSKKMAGRAILLAGPPGTGKTALALAMAQELGNKVPFCPMVGSEVYSS 104

Query: 181 EIKKTEVLMENFRRAIGLRIKEVKEVYEGEVTEITPVQADNPSSSYGKTISHVMICLKTA 360
           EIKKTEVLMENFRRAIGLRIKE KEVYEGEVTE+TP + +NP   YGKTISHV+I LKTA
Sbjct: 105 EIKKTEVLMENFRRAIGLRIKETKEVYEGEVTELTPCETENPMGGYGKTISHVIIGLKTA 164

Query: 361 KGTKSLKMDPLIYENLQKEKVEVGDVIYIEVSSGAVKRQGRSDAYANEYDLEADEYVPLP 540
           KGTK LK+DP IYE+LQKE+VEVGDVIYIE +SGAVKRQGR D +A E+DLEA+EYVPLP
Sbjct: 165 KGTKQLKLDPSIYESLQKERVEVGDVIYIEANSGAVKRQGRCDTFATEFDLEAEEYVPLP 224

Query: 541 KGDAHKKKEVVQDVTLHDLDVANAYPQGGQDIASMMGQLMKQKKTEITDKLRRDIDKIVN 720
           KGD H+KKE++QDVTLHDLDVANA PQGGQDI SMMGQLMK KKTEITDKLR +I+K+VN
Sbjct: 225 KGDVHEKKEIIQDVTLHDLDVANARPQGGQDILSMMGQLMKPKKTEITDKLRGEINKVVN 284

Query: 721 KYIDQGTAELVPGVLFIDEVHMLDLECFTYLSRALEYSIAPIVIFATNRGVCTVKGADEL 900
           KYIDQG AELVPGVLFIDEVHMLD+ECFTYL RALE SIAPIV+FA+NRG C ++G +++
Sbjct: 285 KYIDQGVAELVPGVLFIDEVHMLDIECFTYLHRALESSIAPIVVFASNRGNCLIRGTEDI 344

Query: 901 KS 906
            S
Sbjct: 345 SS 346
>sp|Q03940|RUVB1_YEAST RuvB-like protein 1 (RUVBL1) (TIP49a homolog) (TIP49-homology
           protein 1)
          Length = 463

 Score =  461 bits (1186), Expect = e-129
 Identities = 221/302 (73%), Positives = 270/302 (89%)
 Frame = +1

Query: 1   AREAAGVITEMIKAKKLAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSS 180
           AREA GVI ++IKAKK++GRA+LLAG P TGKTALALAI+QELG KVPFCP+VGSE+YS 
Sbjct: 54  AREACGVIVDLIKAKKMSGRAILLAGGPSTGKTALALAISQELGPKVPFCPLVGSELYSV 113

Query: 181 EIKKTEVLMENFRRAIGLRIKEVKEVYEGEVTEITPVQADNPSSSYGKTISHVMICLKTA 360
           E+KKTE LMENFRRAIGLRIKE KEVYEGEVTE+TP  A+NP   YGKTISHV++ LK+A
Sbjct: 114 EVKKTETLMENFRRAIGLRIKETKEVYEGEVTELTPEDAENPLGGYGKTISHVIVGLKSA 173

Query: 361 KGTKSLKMDPLIYENLQKEKVEVGDVIYIEVSSGAVKRQGRSDAYANEYDLEADEYVPLP 540
           KGTK+L++DP IYE++Q+EKV +GDVIYIE ++GAVKR GRSDAYA E+DLE +EYVPLP
Sbjct: 174 KGTKTLRLDPTIYESIQREKVSIGDVIYIEANTGAVKRVGRSDAYATEFDLETEEYVPLP 233

Query: 541 KGDAHKKKEVVQDVTLHDLDVANAYPQGGQDIASMMGQLMKQKKTEITDKLRRDIDKIVN 720
           KG+ HKKKE+VQDVTLHDLDVANA PQGGQD+ SMMGQL+K KKTEIT+KLR++++K+V 
Sbjct: 234 KGEVHKKKEIVQDVTLHDLDVANARPQGGQDVISMMGQLLKPKKTEITEKLRQEVNKVVA 293

Query: 721 KYIDQGTAELVPGVLFIDEVHMLDLECFTYLSRALEYSIAPIVIFATNRGVCTVKGADEL 900
           KYIDQG AEL+PGVLFIDEV+MLD+E FTYL++ALE +IAP+V+ A+NRG+ TV+G +++
Sbjct: 294 KYIDQGVAELIPGVLFIDEVNMLDIEIFTYLNKALESNIAPVVVLASNRGMTTVRGTEDV 353

Query: 901 KS 906
            S
Sbjct: 354 IS 355
>sp|Q9DE27|RUVB2_XENLA RuvB-like 2 (Reptin)
          Length = 462

 Score =  253 bits (647), Expect = 4e-67
 Identities = 138/300 (46%), Positives = 196/300 (65%), Gaps = 2/300 (0%)
 Frame = +1

Query: 1   AREAAGVITEMIKAKKLAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSS 180
           +R AAGVI EMIK  K+AGRAVL+AG PGTGKTA+A+ +AQ LGS  PF  + GSE++S 
Sbjct: 51  SRRAAGVILEMIKEGKIAGRAVLIAGQPGTGKTAIAMGMAQALGSDTPFTAIAGSEIFSL 110

Query: 181 EIKKTEVLMENFRRAIGLRIKEVKEVYEGEVTEITPVQADNPSSSYGKTISHVMICLKTA 360
           E+ KTE L + FRR+IG+RIKE  E+ EGEV E   VQ D P++  G  +    + LKT 
Sbjct: 111 EMSKTEALTQAFRRSIGVRIKEETEIIEGEVVE---VQIDRPATGTGAKVG--KLTLKTT 165

Query: 361 KGTKSLKMDPLIYENLQKEKVEVGDVIYIEVSSGAVKRQGRSDAYANEYDLEADE--YVP 534
           +      +   + E+L KEKV+ GDVI I+ ++G + + GR+   A +YD    +  +V 
Sbjct: 166 EMETIYDLGTKMIESLTKEKVQAGDVITIDKATGKITKLGRAFTRARDYDAMGSQTKFVQ 225

Query: 535 LPKGDAHKKKEVVQDVTLHDLDVANAYPQGGQDIASMMGQLMKQKKTEITDKLRRDIDKI 714
            P G+  K+KEVV  V+LH++DV N+  QG          L      EI  ++R  I+  
Sbjct: 226 CPDGELQKRKEVVHTVSLHEIDVINSRTQG-------FLALFSGDTGEIKSEVREQINAK 278

Query: 715 VNKYIDQGTAELVPGVLFIDEVHMLDLECFTYLSRALEYSIAPIVIFATNRGVCTVKGAD 894
           V ++ ++G AE++PGVLFIDEVHMLD+ECF++L+RALE  +AP++I ATNRG+  ++G +
Sbjct: 279 VAEWREEGKAEIIPGVLFIDEVHMLDIECFSFLNRALESDMAPVLIMATNRGITRIRGTN 338
>sp|P83571|RUVB2_BRARE RuvB-like 2 (Reptin) (zReptin)
          Length = 463

 Score =  252 bits (643), Expect = 1e-66
 Identities = 135/300 (45%), Positives = 197/300 (65%), Gaps = 2/300 (0%)
 Frame = +1

Query: 1   AREAAGVITEMIKAKKLAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSS 180
           +R AAG+I EMIK  ++AGRAVL+AG PGTGKTA+A+ IAQ LG   PF  + GSE++S 
Sbjct: 52  SRRAAGLILEMIKDGQIAGRAVLIAGQPGTGKTAIAMGIAQSLGPDTPFTALAGSEIFSL 111

Query: 181 EIKKTEVLMENFRRAIGLRIKEVKEVYEGEVTEITPVQADNPSSSYGKTISHVMICLKTA 360
           E+ KTE L + FR+AIG+RIKE  E+ EGEV EI   Q D P++  G  +    + LKT 
Sbjct: 112 EMSKTEALSQAFRKAIGVRIKEETEIIEGEVVEI---QIDRPATGTGAKVG--KLTLKTT 166

Query: 361 KGTKSLKMDPLIYENLQKEKVEVGDVIYIEVSSGAVKRQGRSDAYANEYDL--EADEYVP 534
           +      +   + E+L KE+V+ GDVI I+ ++G + + GRS   A +YD      ++V 
Sbjct: 167 EMETIYDLGTKMIESLSKERVQAGDVITIDKATGKISKLGRSFTRARDYDAMGAQTQFVQ 226

Query: 535 LPKGDAHKKKEVVQDVTLHDLDVANAYPQGGQDIASMMGQLMKQKKTEITDKLRRDIDKI 714
            P+G+  K+KEVV  V+LH++DV N+  QG          L      EI  ++R  I+  
Sbjct: 227 CPEGELQKRKEVVHTVSLHEIDVINSRTQG-------FLALFSGDTGEIKSEVREQINAK 279

Query: 715 VNKYIDQGTAELVPGVLFIDEVHMLDLECFTYLSRALEYSIAPIVIFATNRGVCTVKGAD 894
           V+++ ++G AE++PGVLFIDEVHMLD+ECF++L+RALE  ++P++I ATNRG+  ++G +
Sbjct: 280 VSEWREEGKAEIIPGVLFIDEVHMLDIECFSFLNRALESDLSPVLIMATNRGITRIRGTN 339
>sp|Q9WTM5|RUVB2_MOUSE RuvB-like 2 (p47 protein)
          Length = 463

 Score =  248 bits (632), Expect = 2e-65
 Identities = 135/298 (45%), Positives = 193/298 (64%), Gaps = 2/298 (0%)
 Frame = +1

Query: 1   AREAAGVITEMIKAKKLAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSS 180
           AR AAGV+ EMI+  K+AGRAVL+AG PGTGKTA+A+ +AQ LG   PF  + GSE++S 
Sbjct: 52  ARRAAGVVLEMIREGKIAGRAVLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSL 111

Query: 181 EIKKTEVLMENFRRAIGLRIKEVKEVYEGEVTEITPVQADNPSSSYGKTISHVMICLKTA 360
           E+ KTE L + FRR+IG+RIKE  E+ EGEV EI   Q D P++  G  +    + LKT 
Sbjct: 112 EMSKTEALTQAFRRSIGVRIKEETEIIEGEVVEI---QIDRPATGTGSKVG--KLTLKTT 166

Query: 361 KGTKSLKMDPLIYENLQKEKVEVGDVIYIEVSSGAVKRQGRSDAYANEYDLEADE--YVP 534
           +      +   + E+L K+KV+ GDVI I+ ++G + + GRS   A +YD    +  +V 
Sbjct: 167 EMETIYDLGTKMIESLTKDKVQAGDVITIDKATGKISKLGRSFTRARDYDAMGSQTKFVQ 226

Query: 535 LPKGDAHKKKEVVQDVTLHDLDVANAYPQGGQDIASMMGQLMKQKKTEITDKLRRDIDKI 714
            P G+  K+KEVV  V+LH++DV N+  QG          L      EI  ++R  I+  
Sbjct: 227 CPDGELQKRKEVVHTVSLHEIDVINSRTQG-------FLALFSGDTGEIKSEVREQINAK 279

Query: 715 VNKYIDQGTAELVPGVLFIDEVHMLDLECFTYLSRALEYSIAPIVIFATNRGVCTVKG 888
           V ++ ++G AE++PGVLFIDEVHMLD+E F++L+RALE  +AP++I ATNRG+  ++G
Sbjct: 280 VAEWREEGKAEIIPGVLFIDEVHMLDIESFSFLNRALESDMAPVLIMATNRGITRIRG 337
>sp|Q9Y230|RUVB2_HUMAN RuvB-like 2 (48-kDa TATA box-binding protein-interacting protein)
           (48-kDa TBP-interacting protein) (TIP49b) (Repressing
           pontin 52) (Reptin 52) (51 kDa erythrocyte cytosolic
           protein) (ECP-51) (TIP60-associated protein 54-beta)
           (TAP54-beta)
          Length = 463

 Score =  248 bits (632), Expect = 2e-65
 Identities = 135/298 (45%), Positives = 193/298 (64%), Gaps = 2/298 (0%)
 Frame = +1

Query: 1   AREAAGVITEMIKAKKLAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSS 180
           AR AAGV+ EMI+  K+AGRAVL+AG PGTGKTA+A+ +AQ LG   PF  + GSE++S 
Sbjct: 52  ARRAAGVVLEMIREGKIAGRAVLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSL 111

Query: 181 EIKKTEVLMENFRRAIGLRIKEVKEVYEGEVTEITPVQADNPSSSYGKTISHVMICLKTA 360
           E+ KTE L + FRR+IG+RIKE  E+ EGEV EI   Q D P++  G  +    + LKT 
Sbjct: 112 EMSKTEALTQAFRRSIGVRIKEETEIIEGEVVEI---QIDRPATGTGSKVG--KLTLKTT 166

Query: 361 KGTKSLKMDPLIYENLQKEKVEVGDVIYIEVSSGAVKRQGRSDAYANEYDLEADE--YVP 534
           +      +   + E+L K+KV+ GDVI I+ ++G + + GRS   A +YD    +  +V 
Sbjct: 167 EMETIYDLGTKMIESLTKDKVQAGDVITIDKATGKISKLGRSFTRARDYDAMGSQTKFVQ 226

Query: 535 LPKGDAHKKKEVVQDVTLHDLDVANAYPQGGQDIASMMGQLMKQKKTEITDKLRRDIDKI 714
            P G+  K+KEVV  V+LH++DV N+  QG          L      EI  ++R  I+  
Sbjct: 227 CPDGELQKRKEVVHTVSLHEIDVINSRTQG-------FLALFSGDTGEIKSEVREQINAK 279

Query: 715 VNKYIDQGTAELVPGVLFIDEVHMLDLECFTYLSRALEYSIAPIVIFATNRGVCTVKG 888
           V ++ ++G AE++PGVLFIDEVHMLD+E F++L+RALE  +AP++I ATNRG+  ++G
Sbjct: 280 VAEWREEGKAEIIPGVLFIDEVHMLDIESFSFLNRALESDMAPVLIMATNRGITRIRG 337
>sp|Q12464|RUVB2_YEAST RuvB-like protein 2 (RUVBL2) (TIP49b homolog) (TIP49-homology
           protein 2)
          Length = 471

 Score =  236 bits (601), Expect = 9e-62
 Identities = 134/300 (44%), Positives = 191/300 (63%), Gaps = 2/300 (0%)
 Frame = +1

Query: 1   AREAAGVITEMIKAKKLAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSS 180
           AR AAGVI +M++   +AGRAVL+AGPP TGKTALA+ ++Q LG  VPF  + GSE++S 
Sbjct: 50  ARRAAGVILKMVQNGTIAGRAVLVAGPPSTGKTALAMGVSQSLGKDVPFTAIAGSEIFSL 109

Query: 181 EIKKTEVLMENFRRAIGLRIKEVKEVYEGEVTEITPVQADNPSSSYGKTISHVMICLKTA 360
           E+ KTE L + FR++IG++IKE  E+ EGEV EI   ++       GK      + +KT 
Sbjct: 110 ELSKTEALTQAFRKSIGIKIKEETELIEGEVVEIQIDRSITGGHKQGK------LTIKTT 163

Query: 361 KGTKSLKMDPLIYENLQKEKVEVGDVIYIEVSSGAVKRQGRSDAYANEYD-LEAD-EYVP 534
                 ++   + + L KEKV  GDVI I+ +SG + + GRS A + +YD + AD  +V 
Sbjct: 164 DMETIYELGNKMIDGLTKEKVLAGDVISIDKASGKITKLGRSFARSRDYDAMGADTRFVQ 223

Query: 535 LPKGDAHKKKEVVQDVTLHDLDVANAYPQGGQDIASMMGQLMKQKKTEITDKLRRDIDKI 714
            P+G+  K+K VV  V+LH++DV N+  QG          L      EI  ++R  I+  
Sbjct: 224 CPEGELQKRKTVVHTVSLHEIDVINSRTQG-------FLALFTGDTGEIRSEVRDQINTK 276

Query: 715 VNKYIDQGTAELVPGVLFIDEVHMLDLECFTYLSRALEYSIAPIVIFATNRGVCTVKGAD 894
           V ++ ++G AE+VPGVLFIDEVHMLD+ECF++++RALE   APIV+ ATNRGV   +G +
Sbjct: 277 VAEWKEEGKAEIVPGVLFIDEVHMLDIECFSFINRALEDEFAPIVMMATNRGVSKTRGTN 336
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.315    0.133    0.366 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 91,362,656
Number of Sequences: 369166
Number of extensions: 1709092
Number of successful extensions: 7507
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6845
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7476
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 9270587090
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)