Planaria EST Database


DrC_02841

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_02841
         (346 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P19959|NXS2_AIPLA  Short neurotoxin B precursor                 37   0.018
sp|P68412|NXS1_ASTST  Short neurotoxin 1 (Toxin A) >gi|55977...    36   0.024
sp|P01474|CX2_NAJME  Cytotoxin 2 (Cytotoxin V-II-2/V-II-3)         35   0.041
sp|P32879|NXS1_AIPLA  Short neurotoxin A                           35   0.070
sp|P19958|NXS3_AIPLA  Short neurotoxin C                           35   0.070
sp|Q00996|CD59_SHV21  Surface glycoprotein CD59 homolog prec...    35   0.070
sp|P62388|NXSA_PELPL  Pelamitoxin a >gi|55977291|sp|P62376|N...    35   0.070
sp|P25494|NXS1_HYDCY  Short neurotoxin 1 (Hydrophitoxin A)         34   0.091
sp|P19960|NXS4_AIPLA  Short neurotoxin D precursor                 34   0.12 
sp|P01473|CX3_NAJME  Cytotoxin 3 (Component 3.20)                  33   0.16 
>sp|P19959|NXS2_AIPLA Short neurotoxin B precursor
          Length = 81

 Score = 36.6 bits (83), Expect = 0.018
 Identities = 24/81 (29%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
 Frame = +3

Query: 6   LLLFSIIITNFNLYFAQ-LTCFNCITCPIPFTTSLTINNCNFCTVTNYNNGTVNRGCGTL 182
           LLL  +++T   L     LTC N  +     TT    N+C   T  ++    + RGCG  
Sbjct: 4   LLLTLVVVTIVCLDLGYTLTCCNQQSSQPKTTTDCADNSCYKMTWRDHRGTRIERGCGCP 63

Query: 183 CVVGTVNNVTYQCCNSNQCNS 245
            V      +  +CC +N+CN+
Sbjct: 64  QV---KPGIKLECCKTNECNN 81
>sp|P68412|NXS1_ASTST Short neurotoxin 1 (Toxin A)
 sp|P68414|NXSA_ACAPE Short neurotoxin 1 (Major/minor neurotoxin)
 sp|P68413|NXS1_HYDOR Short neurotoxin 1 (Toxin A)
          Length = 60

 Score = 36.2 bits (82), Expect = 0.024
 Identities = 18/63 (28%), Positives = 33/63 (52%)
 Frame = +3

Query: 57  LTCFNCITCPIPFTTSLTINNCNFCTVTNYNNGTVNRGCGTLCVVGTVNNVTYQCCNSNQ 236
           +TC N  +     TT+   N+C   T +++    + RGCG   V    + +  +CC++N+
Sbjct: 1   MTCCNQQSSQPKTTTNCAGNSCYKKTWSDHRGTIIERGCGCPQV---KSGIKLECCHTNE 57

Query: 237 CNS 245
           CN+
Sbjct: 58  CNN 60
>sp|P01474|CX2_NAJME Cytotoxin 2 (Cytotoxin V-II-2/V-II-3)
          Length = 61

 Score = 35.4 bits (80), Expect = 0.041
 Identities = 20/60 (33%), Positives = 26/60 (43%), Gaps = 3/60 (5%)
 Frame = +3

Query: 72  CITCPIPFTTSLTINNCNFC---TVTNYNNGTVNRGCGTLCVVGTVNNVTYQCCNSNQCN 242
           C    +PF         N C   T+      T NRGC   C   ++  V Y CCN+N+CN
Sbjct: 3   CHNTLLPFIYKTCPEGQNLCFKGTLKFPKKTTYNRGCAATCPKSSLL-VKYVCCNTNKCN 61
>sp|P32879|NXS1_AIPLA Short neurotoxin A
          Length = 60

 Score = 34.7 bits (78), Expect = 0.070
 Identities = 19/63 (30%), Positives = 29/63 (46%)
 Frame = +3

Query: 57  LTCFNCITCPIPFTTSLTINNCNFCTVTNYNNGTVNRGCGTLCVVGTVNNVTYQCCNSNQ 236
           LTC N  +     TT    N+C   T  ++    + RGCG   V      +  +CC +N+
Sbjct: 1   LTCCNQQSSQPKTTTDCADNSCYKKTWQDHRGTRIERGCGCPQV---KPGIKLECCKTNE 57

Query: 237 CNS 245
           CN+
Sbjct: 58  CNN 60
>sp|P19958|NXS3_AIPLA Short neurotoxin C
          Length = 60

 Score = 34.7 bits (78), Expect = 0.070
 Identities = 19/63 (30%), Positives = 29/63 (46%)
 Frame = +3

Query: 57  LTCFNCITCPIPFTTSLTINNCNFCTVTNYNNGTVNRGCGTLCVVGTVNNVTYQCCNSNQ 236
           LTC N  +     TT    N+C   T  ++    + RGCG   V      +  +CC +N+
Sbjct: 1   LTCCNQQSSQPKTTTDCADNSCYKKTWKDHRGTRIERGCGCPQV---KPGIKLECCKTNE 57

Query: 237 CNS 245
           CN+
Sbjct: 58  CNN 60
>sp|Q00996|CD59_SHV21 Surface glycoprotein CD59 homolog precursor
          Length = 121

 Score = 34.7 bits (78), Expect = 0.070
 Identities = 28/114 (24%), Positives = 50/114 (43%), Gaps = 16/114 (14%)
 Frame = +3

Query: 9   LLFSIIITN-FNLYFAQLTCFNCITCPIPFTTSLTI-NNCNFCTVTNYNNGTVNRGCGTL 182
           +LF++++T  F      L C+NC    +  TTS +  +N + C +    +G   R C   
Sbjct: 3   ILFTLVLTFVFCKPIHSLQCYNCSHSTMQCTTSTSCTSNLDSCLIAKAGSGVYYR-CWKF 61

Query: 183 --CVVGTVNN------VTYQCCNSNQCNSG------KRSVINFVQFFISIFIST 302
             C    ++N      + Y CC  N CN        KR++ +     +++F+ T
Sbjct: 62  DDCSFKRISNQLSETQLKYHCCKKNLCNVNKGIENIKRTISDKALLLLALFLVT 115
>sp|P62388|NXSA_PELPL Pelamitoxin a
 sp|P62376|NXS2_HYDCY Short neurotoxin 2 (Hydrophitoxin b)
          Length = 60

 Score = 34.7 bits (78), Expect = 0.070
 Identities = 17/63 (26%), Positives = 33/63 (52%)
 Frame = +3

Query: 57  LTCFNCITCPIPFTTSLTINNCNFCTVTNYNNGTVNRGCGTLCVVGTVNNVTYQCCNSNQ 236
           +TC N  +     TT+   ++C   T +++    + RGCG   V    + +  +CC++N+
Sbjct: 1   MTCCNQQSSQPKTTTNCAESSCYKKTWSDHRGTRIERGCGCPQV---KSGIKLECCHTNE 57

Query: 237 CNS 245
           CN+
Sbjct: 58  CNN 60
>sp|P25494|NXS1_HYDCY Short neurotoxin 1 (Hydrophitoxin A)
          Length = 60

 Score = 34.3 bits (77), Expect = 0.091
 Identities = 17/63 (26%), Positives = 32/63 (50%)
 Frame = +3

Query: 57  LTCFNCITCPIPFTTSLTINNCNFCTVTNYNNGTVNRGCGTLCVVGTVNNVTYQCCNSNQ 236
           +TC N  +     TT+   ++C   T +++    + RGCG   V      +  +CC++N+
Sbjct: 1   MTCCNQQSSQPKTTTNCAESSCYKKTWSDHRGTRIERGCGCPQV---KKGIKLECCHTNE 57

Query: 237 CNS 245
           CN+
Sbjct: 58  CNN 60
>sp|P19960|NXS4_AIPLA Short neurotoxin D precursor
          Length = 81

 Score = 33.9 bits (76), Expect = 0.12
 Identities = 23/81 (28%), Positives = 37/81 (45%), Gaps = 1/81 (1%)
 Frame = +3

Query: 6   LLLFSIIITNFNLYFAQ-LTCFNCITCPIPFTTSLTINNCNFCTVTNYNNGTVNRGCGTL 182
           LLL  +++T   L     LTC N  +     TT    ++C   T  ++    + RGCG  
Sbjct: 4   LLLTLVVVTIVCLDLGYTLTCCNQQSSQPKTTTDCADDSCYKKTWKDHRGTRIERGCGCP 63

Query: 183 CVVGTVNNVTYQCCNSNQCNS 245
            V      +  +CC +N+CN+
Sbjct: 64  QV---KPGIKLECCKTNECNN 81
>sp|P01473|CX3_NAJME Cytotoxin 3 (Component 3.20)
          Length = 61

 Score = 33.5 bits (75), Expect = 0.16
 Identities = 20/60 (33%), Positives = 25/60 (41%), Gaps = 3/60 (5%)
 Frame = +3

Query: 72  CITCPIPFTTSLTINNCNFC---TVTNYNNGTVNRGCGTLCVVGTVNNVTYQCCNSNQCN 242
           C   P+PF         N C   T+      T  RGC   C   T   V Y CCN+++CN
Sbjct: 3   CHNTPLPFIYKTCPEGNNLCFKGTLKFPKKITYKRGCADACPK-TSALVKYVCCNTDKCN 61
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,116,075
Number of Sequences: 369166
Number of extensions: 454793
Number of successful extensions: 1716
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1657
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1704
length of database: 68,354,980
effective HSP length: 82
effective length of database: 53,206,710
effective search space used: 1702614720
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)