Planaria EST Database


DrC_02795

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_02795
         (877 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P42524|CCNB_DICDI  G2/mitotic-specific cyclin-B                 42   0.003
sp|O74653|POB1_SCHPO  Protein pob1 (BOI protein homolog)           38   0.032
sp|P47136|BUD4_YEAST  Bud site selection protein BUD4              36   0.16 
sp|P54637|PTP3_DICDI  Tyrosine-protein phosphatase 3 (Protei...    36   0.16 
sp|Q10136|STE7_SCHPO  Protein ste7                                 35   0.21 
sp|P47033|PRY3_YEAST  PRY3 protein (Pathogen related in Sc 3)      34   0.47 
sp|P10961|HSF_YEAST  Heat shock factor protein (HSF) (Heat s...    34   0.47 
sp|Q86XJ1|GA2L3_HUMAN  GAS2-like protein 3 (Growth arrest-sp...    34   0.61 
sp|P40059|DOT6_YEAST  Disrupter of telomere silencing protein 6    33   0.80 
sp|O42709|MCM10_SCHPO  DNA replication licensing factor mcm1...    33   1.0  
>sp|P42524|CCNB_DICDI G2/mitotic-specific cyclin-B
          Length = 436

 Score = 41.6 bits (96), Expect = 0.003
 Identities = 42/166 (25%), Positives = 66/166 (39%), Gaps = 10/166 (6%)
 Frame = +2

Query: 272 NSIVLRTTQSQSTPMCKISPNSSLPVYSIGSSNQIKVVSTEPLQPDQNIFISQSNNASIS 451
           N + ++T    S     I   + +P  SIG     K+  T  L+  +      +NN   +
Sbjct: 6   NPLNIKTRSHSSMGGGMIMDENKVPKSSIGMDK--KIGGTTGLKSHRGALSDLTNNTHQT 63

Query: 452 NPI--KVYKSSNNVIIKPTSSTANNRPIIRLQPIPSNNQK-KNSIIISKSEPF------- 601
             +  K  + SNN II P  +   N  I R + I  N    +NS +IS   P        
Sbjct: 64  TGMATKTVQLSNNNIIMPQPTNTRNNIITRSKSIIDNGASLRNSALISGVLPNANGPVNK 123

Query: 602 IRNFGISPNVSANNITNHPIKTVSTSITTPIVYENQQEIEVTELME 739
           ++   I      NNI   P+        T ++ E Q  I++TE+ E
Sbjct: 124 VQKRDIQSMEMMNNIPQQPVMIDDVDNDTNMIQEEQMVIDITEVPE 169
>sp|O74653|POB1_SCHPO Protein pob1 (BOI protein homolog)
          Length = 871

 Score = 38.1 bits (87), Expect = 0.032
 Identities = 31/111 (27%), Positives = 53/111 (47%), Gaps = 3/111 (2%)
 Frame = +2

Query: 80  NASGMYPSLNN---IKVLDNMASKAMNQMHTQRAEYNHAKVRTSLPVGSINENQPKILSI 250
           N + M+PS        +LDN  S  ++  +T  A+YN+A   TS P  S   +  K+LS 
Sbjct: 138 NFNSMFPSSKQEGPSPLLDNQPSSDLSNFNTIDADYNNASASTSAPATS--ASLKKVLSA 195

Query: 251 KNSGVSKNSIVLRTTQSQSTPMCKISPNSSLPVYSIGSSNQIKVVSTEPLQ 403
           ++S     + +    Q+ ST   + +PN S P+  I +     +  +E +Q
Sbjct: 196 EDSVRETITDIETALQNMSTSASR-TPNDSSPLPYIENRPASSLAVSEKIQ 245
>sp|P47136|BUD4_YEAST Bud site selection protein BUD4
          Length = 1447

 Score = 35.8 bits (81), Expect = 0.16
 Identities = 58/244 (23%), Positives = 106/244 (43%), Gaps = 19/244 (7%)
 Frame = +2

Query: 83  ASGMYPSLNNIKVLDNMASKAMNQMHTQRAEYNHAKVRTSLPVGSINENQPKILSIKNSG 262
           A+G     N+ KVL+N+ + A +     R E    K+ +S    ++   QP +LS   S 
Sbjct: 110 ANGALGHANSPKVLNNLKNMAQDIDKLARDEEKPVKLSSSPLKFTLKSTQP-LLSYPESP 168

Query: 263 VSKNSIVLRT-------------TQSQSTPMCKISPNSSLPVYSIGSSNQIKVVSTEPLQ 403
           + ++SI + T             T    +P    SP S +P+ +  S N++ +  T  L 
Sbjct: 169 IHRSSIEIETNYDDEDEEEEDAYTCLTQSPQILHSP-SRIPITNAVSINKLNLDFT--LN 225

Query: 404 PDQNIFISQSNNASISNPIKVYKSSNNVIIKPTSSTANNRPIIRLQPIPSN--NQKKNSI 577
           P+++     S+ +  S   ++   +   +    SST    P+     +PS   N   NS 
Sbjct: 226 PNESDKSLVSDTSVDSTGRELDTKTIPELPFCMSSTPEMTPVDEKCNLPSKLLNTSNNSH 285

Query: 578 IISKS-EPFIRNFGISPNV-SANNITNHPIKT-VSTSITTPIVYENQQEIE-VTELMELK 745
             S+S    + +  IS N+  A++  N+P+ T     I   +V + QQ +E + +  + K
Sbjct: 286 SDSRSPTASVEDLNISTNLPGADSSQNNPVTTDADALIENDVVRDLQQNMEHIDDAFDEK 345

Query: 746 SEID 757
             +D
Sbjct: 346 KVLD 349
>sp|P54637|PTP3_DICDI Tyrosine-protein phosphatase 3 (Protein-tyrosine-phosphate
           phosphohydrolase 3)
          Length = 989

 Score = 35.8 bits (81), Expect = 0.16
 Identities = 46/207 (22%), Positives = 86/207 (41%), Gaps = 12/207 (5%)
 Frame = +2

Query: 107 NNIKVLDNMASKAMNQMHTQRAEYNHAKVRTSLPVGSIN-ENQP--KILSIKNSGVSKN- 274
           NN    +N  +   N  +      N++     + V SI  +N+P  ++ S+    V  N 
Sbjct: 161 NNNNNNNNNNNNNNNNNNNNNNNNNNSNSNIEINVPSIQFDNEPAMEVDSVAPLNVPSNH 220

Query: 275 ---SIVLRTTQSQSTPMCKISPNSSLPVYSIGSSNQIKVVSTEPLQPDQNIFISQS--NN 439
              ++ +  T+S ST    I   + LP     SS+ +   +T       ++ + QS  NN
Sbjct: 221 TRTTLAMHNTKSLSTS--NIGLLNILPNQQSSSSSSLSSTTTTTTTTSSSLLMPQSLFNN 278

Query: 440 ASISNPIKVYKSSNNVIIKPTSSTANNRPI---IRLQPIPSNNQKKNSIIISKSEPFIRN 610
           ++ +N      SSN  I+   + + ++ P    ++LQ +    Q+       K+     N
Sbjct: 279 STYNNHHNNNNSSNAGIVGGLNGSTSSLPTQAQVQLQQMQQQMQQHQQHQYKKA-----N 333

Query: 611 FGISPNVSANNITNHPIKTVSTSITTP 691
                 V  NN+ N+P+ T ++S   P
Sbjct: 334 LSSLSTVVDNNLNNNPMNTSTSSPAQP 360
>sp|Q10136|STE7_SCHPO Protein ste7
          Length = 569

 Score = 35.4 bits (80), Expect = 0.21
 Identities = 47/195 (24%), Positives = 80/195 (41%), Gaps = 19/195 (9%)
 Frame = +2

Query: 185 AKVRTSLPVGSINENQPKILSIKNSGVSKNSIVLRTTQSQSTPMCKISPNSSLPVYSIGS 364
           +K  +SLP    N++   I  +  + +SK    L ++QS    +  + PN +    S  S
Sbjct: 102 SKSASSLPCSKSNDSMVNICYMLKATISKRYAFLGSSQSAKAELIMVPPNLAGKPLSANS 161

Query: 365 S-----NQIKVVSTEPLQPDQNIFISQSNNASISNPIKVYKSS---NNVIIKPTSSTAN- 517
           S        ++   + + P  +++   S N   SNP  +  SS    +     +SS+ N 
Sbjct: 162 SFGSSAKTFQLPEFDSVTPSASLYKQPSFN---SNPAPITTSSATHTSQFSTSSSSSVNS 218

Query: 518 -NRPIIRLQPIPSNNQKKNSIIISKSE--PFI--RNFGISPNVSANNITNHPIKTVSTSI 682
            + P++   P    N    +   S S   PF+  R F +S   SA++    PI       
Sbjct: 219 VHTPVMVPNPYFQYNSSMTAPSSSSSSVAPFVPRRQFSVS---SASDPPQTPISMSPPIP 275

Query: 683 TTP-----IVYENQQ 712
            TP      +Y+NQQ
Sbjct: 276 PTPSQFSAFMYQNQQ 290
>sp|P47033|PRY3_YEAST PRY3 protein (Pathogen related in Sc 3)
          Length = 881

 Score = 34.3 bits (77), Expect = 0.47
 Identities = 37/184 (20%), Positives = 75/184 (40%), Gaps = 22/184 (11%)
 Frame = +2

Query: 209 VGSINENQPKILSIKNSGVSKNSIVLRTTQSQSTPMCKISP----NSSLPVYSIGSSNQI 376
           +G   E    ++S  +S  S +S    T+ + ST    I P      +  V S  SS+ +
Sbjct: 151 LGEFAEEVEPLISTVSSSSSSSSSTSTTSDTVSTISSSIMPAVAQGYTTTVSSAASSSSL 210

Query: 377 KVVSTEPLQP--------------DQNIFISQSNNASISNPIKVYKSSNNVIIKP--TSS 508
           K  +  P +                +++  S  ++AS S+    Y +S++ ++    TSS
Sbjct: 211 KSTTINPAKTATLTASSSTVITSSTESVGSSTVSSASSSSVTTSYATSSSTVVSSDATSS 270

Query: 509 TANNRPIIRLQPIPSNNQKKNSIIISKSEPFIRNFGISPNVSANNI--TNHPIKTVSTSI 682
           T     +       S++   ++   S S+P   +   S + S  N   ++  I + S+ +
Sbjct: 271 TTTTSSVATSSSTTSSDPTSSTAAASSSDPASSSAAASSSASTENAASSSSAISSSSSMV 330

Query: 683 TTPI 694
           + P+
Sbjct: 331 SAPL 334
>sp|P10961|HSF_YEAST Heat shock factor protein (HSF) (Heat shock transcription factor)
           (HSTF)
          Length = 833

 Score = 34.3 bits (77), Expect = 0.47
 Identities = 38/154 (24%), Positives = 72/154 (46%), Gaps = 20/154 (12%)
 Frame = +2

Query: 179 NHAKVRTSLPVGSINENQPKILSIKNSGV----SKNSIVLRTTQSQSTPMCKISPNS--- 337
           N+ K+ ++  +G   +N   I  +K++       +NS    TT +++     +SPN+   
Sbjct: 422 NNEKLNSANNIGLNRDNTGTIDELKSNDSFINDDRNSFTNATTNARNN----MSPNNDDN 477

Query: 338 SLPVYSIGSSNQIKVVSTEPLQPDQNIFISQSNNASISNPIKVYKSSNNV--IIKP---- 499
           S+   S  ++N+ K +  E ++ + +I      N +++N +  Y S+NN    I+P    
Sbjct: 478 SIDTASTNTTNRKKNID-ENIKNNNDIINDIIFNTNLANNLSNYNSNNNAGSPIRPYKQR 536

Query: 500 -------TSSTANNRPIIRLQPIPSNNQKKNSII 580
                   SST++  P +    I SNN +K S I
Sbjct: 537 YLLKNRANSSTSSENPSLTPFDIESNNDRKISEI 570
>sp|Q86XJ1|GA2L3_HUMAN GAS2-like protein 3 (Growth arrest-specific 2-like 3)
          Length = 694

 Score = 33.9 bits (76), Expect = 0.61
 Identities = 33/162 (20%), Positives = 67/162 (41%), Gaps = 9/162 (5%)
 Frame = +2

Query: 140 KAMNQMHTQRAEYNHAKVRTSLPVGSINEN------QPKILSIKNSGVSKNSIVLRTTQS 301
           K ++  +T +A+   A+    LP  ++  N      QPK L   +     N++      S
Sbjct: 434 KCISSPNTPKAKVIPAQNSADLPESTLLPNKCSGKTQPKYLKHNHISSRDNAVSHLAAHS 493

Query: 302 QSTPMCKISPNSSLPVY---SIGSSNQIKVVSTEPLQPDQNIFISQSNNASISNPIKVYK 472
            S+  C   P +++PV    S  SS ++   S++ +          S+ A  + P+   K
Sbjct: 494 NSSSKCPKLPKANIPVRPKPSFQSSAKMTKTSSKTIATGLGTQSQPSDGAPQAKPVPAQK 553

Query: 473 SSNNVIIKPTSSTANNRPIIRLQPIPSNNQKKNSIIISKSEP 598
             + + +    S ++  P+   Q     ++ KN +  +K +P
Sbjct: 554 LKSALNLNQPVSVSSVSPVKATQ----KSKDKNIVSATKKQP 591
>sp|P40059|DOT6_YEAST Disrupter of telomere silencing protein 6
          Length = 670

 Score = 33.5 bits (75), Expect = 0.80
 Identities = 33/130 (25%), Positives = 59/130 (45%), Gaps = 2/130 (1%)
 Frame = +2

Query: 311 PMCKISPNSSLPVYSIGSSN-QIKVVSTEPL-QPDQNIFISQSNNASISNPIKVYKSSNN 484
           P+ +   +S+  V+S  SSN   K VS +P+  PD     S +++A     I    SS+ 
Sbjct: 537 PLHRAKQSSNKTVFSSSSSNISSKDVSPDPIFSPDPADDSSNTSDAGSRCTITSDTSSSA 596

Query: 485 VIIKPTSSTANNRPIIRLQPIPSNNQKKNSIIISKSEPFIRNFGISPNVSANNITNHPIK 664
             +  T ++ N + I  L      N  ++  I  + +P      I+   + NN+ NH   
Sbjct: 597 ATMNRTPNSKNPQDIALL------NNFRSEAITPRPKPSSTTTSITTETT-NNMINHSSS 649

Query: 665 TVSTSITTPI 694
           T +T+  +P+
Sbjct: 650 TTTTTNNSPL 659
>sp|O42709|MCM10_SCHPO DNA replication licensing factor mcm10 (Minichromosome maintenance
           protein 10) (Cdc23 protein)
          Length = 593

 Score = 33.1 bits (74), Expect = 1.0
 Identities = 26/85 (30%), Positives = 36/85 (42%), Gaps = 6/85 (7%)
 Frame = +2

Query: 431 SNNASISNPIKVYKSSNNVIIKPTSSTANNRPIIRLQPIPSNNQKKNSIIISKSEPFI-- 604
           S NASI NP     S +N  I  T+  A+  P+    P  + + K +  ++  S P I  
Sbjct: 483 SFNASIMNPKSSLPSFSNSAILGTNDAASGTPV----PQDTTSTKVSPAVVFTSSPRIFS 538

Query: 605 ----RNFGISPNVSANNITNHPIKT 667
               R  G  P  SA+  T H   T
Sbjct: 539 PQSLRKIGFDPTHSADASTTHSTAT 563
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 94,780,800
Number of Sequences: 369166
Number of extensions: 1815947
Number of successful extensions: 4992
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4795
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4982
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 8694177530
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)