Planaria EST Database


DrC_02723

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_02723
         (849 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9VZW5|FMAR_DROME  FMRFamide receptor (Larval opioid rece...    44   6e-04
sp|Q899T2|Y086_CLOTE  Hypothetical UPF0182 protein CTC00086        35   0.20 
sp|P49523|CCSA_ODOSI  CYTOCHROME C BIOGENESIS PROTEIN CCSA         33   1.00 
sp|P56479|GALR1_MOUSE  Galanin receptor type 1 (GAL1-R) (GALR1)    33   1.3  
sp|P47211|GALR1_HUMAN  Galanin receptor type 1 (GAL1-R) (GALR1)    33   1.3  
sp|Q62805|GALR1_RAT  Galanin receptor type 1 (GAL1-R) (GALR1)      33   1.3  
sp|Q8K9L3|MVIN_BUCAP  Virulence factor mviN homolog                32   2.2  
sp|Q25158|OPSC2_HEMSA  Compound eye opsin BCRH2                    31   3.8  
sp|P36034|COS9_YEAST  COS9 protein                                 31   5.0  
sp|Q33078|MATK_SAXCE  Maturase K (Intron maturase)                 30   8.4  
>sp|Q9VZW5|FMAR_DROME FMRFamide receptor (Larval opioid receptor) (DFR) (DrmFMRFa-R)
          Length = 549

 Score = 43.9 bits (102), Expect = 6e-04
 Identities = 30/120 (25%), Positives = 52/120 (43%)
 Frame = +2

Query: 485 RNGTDILLTSLAICDVAIIIFSLYIDCIPYTQKTREQQQYYYSKYVALFIPYFLPLQCFF 664
           R+  + LLT LA CD  +II S+ +  IP           YY+       P   P+    
Sbjct: 144 RSSINYLLTGLARCDTVLIITSILLFGIPSIYPYTGHFFGYYNYVYPFISPAVFPIGMIA 203

Query: 665 QTLSSWILCLLLFERYLYQQHGKHAKLIFPFQTAIASLISFVVILFGFTILKFFEMTSIS 844
           QT S ++   +  ERY+   H   A+ +  +  A    I  V     + + +F+E+ +++
Sbjct: 204 QTASIYMTFTVTLERYVAVCHPLKARALCTYGRAKIYFIVCVCFSLAYNMPRFWEVLTVT 263
>sp|Q899T2|Y086_CLOTE Hypothetical UPF0182 protein CTC00086
          Length = 887

 Score = 35.4 bits (80), Expect = 0.20
 Identities = 27/105 (25%), Positives = 47/105 (44%), Gaps = 7/105 (6%)
 Frame = +2

Query: 530 VAIIIFSLYIDCIPYTQKTREQQQYYYSKYVALFIPYFLPLQCFFQT------LSSWILC 691
           +AIII  L +     T    + Q +    Y ++F+  F  +   F        +S W+  
Sbjct: 10  IAIIILLLILFLYRSTSFIIDFQWFQELSYTSVFLKEFFTIGKLFTLSFALIFISIWLYY 69

Query: 692 LLLFERYLYQQHGKHAKLIFPFQTAIASLIS-FVVILFGFTILKF 823
           L L +   +Q+H K  KL+  F   ++SL + F    + + IL+F
Sbjct: 70  LSLKKNINWQEHNKRKKLMIAFNCIVSSLFAYFFSSKYWYQILQF 114
>sp|P49523|CCSA_ODOSI CYTOCHROME C BIOGENESIS PROTEIN CCSA
          Length = 312

 Score = 33.1 bits (74), Expect = 1.00
 Identities = 14/61 (22%), Positives = 30/61 (49%), Gaps = 7/61 (11%)
 Frame = +3

Query: 99  YILIGKFKKMDADASQLDKLP-------FLEDALLLPTSEFDKIAKIKLMNGVKNWDVKV 257
           +++I K++ +D        LP       + E  L  P+ E  ++ K+KL+  + NW  ++
Sbjct: 161 FLVISKYQDIDLQILDESSLPLYNIMLDYYEAKLFSPSDEVSELGKLKLLQSLDNWSYRI 220

Query: 258 V 260
           +
Sbjct: 221 I 221
>sp|P56479|GALR1_MOUSE Galanin receptor type 1 (GAL1-R) (GALR1)
          Length = 348

 Score = 32.7 bits (73), Expect = 1.3
 Identities = 19/85 (22%), Positives = 40/85 (47%)
 Frame = +2

Query: 485 RNGTDILLTSLAICDVAIIIFSLYIDCIPYTQKTREQQQYYYSKYVALFIPYFLPLQCFF 664
           R+ T++ + +L+I D+A ++F     CIP+         +    ++  FI YF  +    
Sbjct: 67  RSTTNLFILNLSIADLAYLLF-----CIPFQATVYALPTWVLGAFICKFIHYFFTVS--- 118

Query: 665 QTLSSWILCLLLFERYLYQQHGKHA 739
             +S + L  +  +RY+   H + +
Sbjct: 119 MLVSIFTLAAMSVDRYVAIVHSRRS 143
>sp|P47211|GALR1_HUMAN Galanin receptor type 1 (GAL1-R) (GALR1)
          Length = 349

 Score = 32.7 bits (73), Expect = 1.3
 Identities = 19/85 (22%), Positives = 40/85 (47%)
 Frame = +2

Query: 485 RNGTDILLTSLAICDVAIIIFSLYIDCIPYTQKTREQQQYYYSKYVALFIPYFLPLQCFF 664
           R+ T++ + +L+I D+A ++F     CIP+         +    ++  FI YF  +    
Sbjct: 67  RSTTNLFILNLSIADLAYLLF-----CIPFQATVYALPTWVLGAFICKFIHYFFTVS--- 118

Query: 665 QTLSSWILCLLLFERYLYQQHGKHA 739
             +S + L  +  +RY+   H + +
Sbjct: 119 MLVSIFTLAAMSVDRYVAIVHSRRS 143
>sp|Q62805|GALR1_RAT Galanin receptor type 1 (GAL1-R) (GALR1)
          Length = 346

 Score = 32.7 bits (73), Expect = 1.3
 Identities = 19/85 (22%), Positives = 40/85 (47%)
 Frame = +2

Query: 485 RNGTDILLTSLAICDVAIIIFSLYIDCIPYTQKTREQQQYYYSKYVALFIPYFLPLQCFF 664
           R+ T++ + +L+I D+A ++F     CIP+         +    ++  FI YF  +    
Sbjct: 66  RSTTNLFILNLSIADLAYLLF-----CIPFQATVYALPTWVLGAFICKFIHYFFTVS--- 117

Query: 665 QTLSSWILCLLLFERYLYQQHGKHA 739
             +S + L  +  +RY+   H + +
Sbjct: 118 MLVSIFTLAAMSVDRYVAIVHSRRS 142
>sp|Q8K9L3|MVIN_BUCAP Virulence factor mviN homolog
          Length = 514

 Score = 32.0 bits (71), Expect = 2.2
 Identities = 28/118 (23%), Positives = 54/118 (45%)
 Frame = +2

Query: 494 TDILLTSLAICDVAIIIFSLYIDCIPYTQKTREQQQYYYSKYVALFIPYFLPLQCFFQTL 673
           T ++LT+  I  +    + ++I    +++ +++ Q    S  + +  PY L     F +L
Sbjct: 91  TILVLTTFVILGIIFSDYIIFISAPGFSESSKKLQ--LASNLLKIMFPYIL-----FISL 143

Query: 674 SSWILCLLLFERYLYQQHGKHAKLIFPFQTAIASLISFVVILFGFTILKFFEMTSISI 847
           SS  LC  +   Y Y          F   +  +SL++  +I+F F    +FE + IS+
Sbjct: 144 SS--LCSSILNSYNY----------FFIPSLSSSLLNISIIVFSFFFSDYFEPSIISL 189
>sp|Q25158|OPSC2_HEMSA Compound eye opsin BCRH2
          Length = 377

 Score = 31.2 bits (69), Expect = 3.8
 Identities = 27/118 (22%), Positives = 54/118 (45%), Gaps = 4/118 (3%)
 Frame = +2

Query: 485 RNGTDILLTSLAICDVAIIIFSLYIDCIPYTQKTREQQQYYYSKYVALFIPYFLPLQCFF 664
           R   +IL+ +LA+ D  +I+ +  +    Y           +S  V +F P +  +    
Sbjct: 86  RTPANILVVNLALSD--LIMLTTNVPFFTYN---------CFSGGVWMFSPQYCEIYACL 134

Query: 665 QTL----SSWILCLLLFERYLYQQHGKHAKLIFPFQTAIASLISFVVILFGFTILKFF 826
             +    S W+LC++ F+RY    +G +   +   +  + +LIS+V+ + G  +  FF
Sbjct: 135 GAITGVCSIWLLCMISFDRYNIICNGFNGPKLTTGKAVVFALISWVIAI-GCALPPFF 191
>sp|P36034|COS9_YEAST COS9 protein
          Length = 407

 Score = 30.8 bits (68), Expect = 5.0
 Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 4/52 (7%)
 Frame = +3

Query: 102 ILIGKFKKMDADASQL----DKLPFLEDALLLPTSEFDKIAKIKLMNGVKNW 245
           +L+  F     ++S++    D +P++E+AL + ++EFDK  K KL N  K W
Sbjct: 186 VLLEPFSVKKDESSKIKSFGDSVPYIEEALQVYSTEFDK--KWKLFNTEKVW 235

 Score = 30.0 bits (66), Expect = 8.4
 Identities = 25/83 (30%), Positives = 38/83 (45%)
 Frame = +2

Query: 575 TQKTREQQQYYYSKYVALFIPYFLPLQCFFQTLSSWILCLLLFERYLYQQHGKHAKLIFP 754
           +QK    Q  +   +  +F  +F   +CF  T  +W+L LLL     +    K    IFP
Sbjct: 46  SQKVVLPQDLFMDNFTWMFYEFF---KCF--TFRTWLLLLLLMWLPGFLSQIKSINRIFP 100

Query: 755 FQTAIASLISFVVILFGFTILKF 823
           F+  I  L+S +V +F   I  F
Sbjct: 101 FKLCI--LVSCLVGIFLPNIYSF 121
>sp|Q33078|MATK_SAXCE Maturase K (Intron maturase)
          Length = 352

 Score = 30.0 bits (66), Expect = 8.4
 Identities = 23/70 (32%), Positives = 34/70 (48%), Gaps = 6/70 (8%)
 Frame = +2

Query: 593 QQQYYYSKYVA-LFIPYFLPLQCFFQTLSSWI-----LCLLLFERYLYQQHGKHAKLIFP 754
           +  + +  YV+ + IPY + L+   QTL SW+     L LL F  Y YQ       LI P
Sbjct: 137 EDNFVHLNYVSDILIPYPIHLEIVVQTLRSWLKDASSLHLLRFLLYEYQNWN---SLIIP 193

Query: 755 FQTAIASLIS 784
                +S++S
Sbjct: 194 TPKKPSSIVS 203
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 93,427,491
Number of Sequences: 369166
Number of extensions: 1848421
Number of successful extensions: 4659
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4499
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4657
length of database: 68,354,980
effective HSP length: 109
effective length of database: 48,218,865
effective search space used: 8341863645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)