Planaria EST Database


DrC_02706

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_02706
         (376 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q06814|CRTC_SCHMA  Calreticulin precursor (SM4 protein)        197   5e-51
sp|P29413|CRTC_DROME  Calreticulin precursor (CRP55) (Calreg...   191   4e-49
sp|P11012|RAL1_ONCVO  RAL-1 protein precursor (RAL1 antigen)...   190   8e-49
sp|P14211|CRTC_MOUSE  Calreticulin precursor (CRP55) (Calreg...   186   1e-47
sp|Q8K3H7|CRTC_CRIGR  Calreticulin precursor (CRP55) (Calreg...   185   3e-47
sp|P18418|CRTC_RAT  Calreticulin precursor (CRP55) (Calregul...   184   4e-47
sp|P27797|CRTC_HUMAN  Calreticulin precursor (CRP55) (Calreg...   182   2e-46
sp|P15253|CRTC_RABIT  Calreticulin precursor (CRP55) (Calreg...   182   2e-46
sp|P52193|CRTC1_BOVIN  Calreticulin, brain isoform 1 precurs...   181   6e-46
sp|Q9SLY8|CRTC_ORYSA  Calreticulin precursor                      176   1e-44
>sp|Q06814|CRTC_SCHMA Calreticulin precursor (SM4 protein)
          Length = 393

 Score =  197 bits (502), Expect = 5e-51
 Identities = 88/125 (70%), Positives = 107/125 (85%)
 Frame = +2

Query: 2   DAKFYGISYKLDKPISNRDKTLVVQFQVKHEQTIDCGGGYIKLLGKDVDQKNFHGETPYE 181
           DA+FYGI+ K+ +P SNR KT+V+QF VK ++T+ CGG YIKLLG D+D K FHGE+PY+
Sbjct: 68  DARFYGIARKISEPFSNRGKTMVLQFTVKFDKTVSCGGAYIKLLGSDIDPKKFHGESPYK 127

Query: 182 IMFGPDICGISTKKVHVIFNYKGKNHLIKKDIPCKDDEFSHLYTLILKPDNTYEVLIDLE 361
           IMFGPDICG++TKKVHVIFNYKGKNHLIKK+IPCKDD  +HLYTLI+ P+N YEVL+D  
Sbjct: 128 IMFGPDICGMATKKVHVIFNYKGKNHLIKKEIPCKDDLKTHLYTLIVNPNNKYEVLVDNA 187

Query: 362 KVESG 376
           KVE G
Sbjct: 188 KVEEG 192
>sp|P29413|CRTC_DROME Calreticulin precursor (CRP55) (Calregulin) (HACBP)
          Length = 406

 Score =  191 bits (485), Expect = 4e-49
 Identities = 91/125 (72%), Positives = 101/125 (80%)
 Frame = +2

Query: 2   DAKFYGISYKLDKPISNRDKTLVVQFQVKHEQTIDCGGGYIKLLGKDVDQKNFHGETPYE 181
           DA+FY  S K D   SN DK LVVQF VKHEQ IDCGGGY+KL    +DQ + HGE+PYE
Sbjct: 71  DARFYAASRKFDG-FSNEDKPLVVQFSVKHEQNIDCGGGYVKLFDCSLDQTDMHGESPYE 129

Query: 182 IMFGPDICGISTKKVHVIFNYKGKNHLIKKDIPCKDDEFSHLYTLILKPDNTYEVLIDLE 361
           IMFGPDICG  TKKVHVIF+YKGKNHLI KDI CKDD ++H YTLI++PDNTYEVLID E
Sbjct: 130 IMFGPDICGPGTKKVHVIFSYKGKNHLISKDIRCKDDVYTHFYTLIVRPDNTYEVLIDNE 189

Query: 362 KVESG 376
           KVESG
Sbjct: 190 KVESG 194
>sp|P11012|RAL1_ONCVO RAL-1 protein precursor (RAL1 antigen) (41 kDa larval antigen)
          Length = 388

 Score =  190 bits (483), Expect = 8e-49
 Identities = 88/125 (70%), Positives = 101/125 (80%)
 Frame = +2

Query: 2   DAKFYGISYKLDKPISNRDKTLVVQFQVKHEQTIDCGGGYIKLLGKDVDQKNFHGETPYE 181
           DAKFY I  K DK  SN+ K+LV+QF VKHEQ IDCGGGY+KL+  DV+ ++ HGETPY 
Sbjct: 68  DAKFYSIGAKFDKSFSNKGKSLVIQFSVKHEQDIDCGGGYVKLMASDVNLEDSHGETPYH 127

Query: 182 IMFGPDICGISTKKVHVIFNYKGKNHLIKKDIPCKDDEFSHLYTLILKPDNTYEVLIDLE 361
           IMFGPDICG  TKKVHVIF+YK +NH+IKKDI CKDD F+HLYTLI+  DNTYEV ID E
Sbjct: 128 IMFGPDICGPGTKKVHVIFHYKDRNHMIKKDIRCKDDVFTHLYTLIVNSDNTYEVQIDGE 187

Query: 362 KVESG 376
           K ESG
Sbjct: 188 KAESG 192
>sp|P14211|CRTC_MOUSE Calreticulin precursor (CRP55) (Calregulin) (HACBP) (ERp60)
          Length = 416

 Score =  186 bits (473), Expect = 1e-47
 Identities = 88/125 (70%), Positives = 102/125 (81%)
 Frame = +2

Query: 2   DAKFYGISYKLDKPISNRDKTLVVQFQVKHEQTIDCGGGYIKLLGKDVDQKNFHGETPYE 181
           DA+FY +S K + P SN+ +TLVVQF VKHEQ IDCGGGY+KL    +DQK+ HG++ Y 
Sbjct: 71  DARFYALSAKFE-PFSNKGQTLVVQFTVKHEQNIDCGGGYVKLFPSGLDQKDMHGDSEYN 129

Query: 182 IMFGPDICGISTKKVHVIFNYKGKNHLIKKDIPCKDDEFSHLYTLILKPDNTYEVLIDLE 361
           IMFGPDICG  TKKVHVIFNYKGKN LI KDI CKDDEF+HLYTLI++PDNTYEV ID  
Sbjct: 130 IMFGPDICGPGTKKVHVIFNYKGKNVLINKDIRCKDDEFTHLYTLIVRPDNTYEVKIDNS 189

Query: 362 KVESG 376
           +VESG
Sbjct: 190 QVESG 194
>sp|Q8K3H7|CRTC_CRIGR Calreticulin precursor (CRP55) (Calregulin) (HACBP) (ERp60)
          Length = 417

 Score =  185 bits (469), Expect = 3e-47
 Identities = 87/125 (69%), Positives = 102/125 (81%)
 Frame = +2

Query: 2   DAKFYGISYKLDKPISNRDKTLVVQFQVKHEQTIDCGGGYIKLLGKDVDQKNFHGETPYE 181
           DA+FY +S + + P SN+ +TLVVQF VKHEQ IDCGGGY+KL    +DQK+ HG++ Y 
Sbjct: 71  DARFYALSARFE-PFSNKGQTLVVQFTVKHEQNIDCGGGYVKLFPGSLDQKDMHGDSEYN 129

Query: 182 IMFGPDICGISTKKVHVIFNYKGKNHLIKKDIPCKDDEFSHLYTLILKPDNTYEVLIDLE 361
           IMFGPDICG  TKKVHVIFNYKGKN LI KDI CKDDEF+HLYTLI++PDNTYEV ID  
Sbjct: 130 IMFGPDICGPGTKKVHVIFNYKGKNVLINKDIRCKDDEFTHLYTLIVRPDNTYEVKIDNS 189

Query: 362 KVESG 376
           +VESG
Sbjct: 190 QVESG 194
>sp|P18418|CRTC_RAT Calreticulin precursor (CRP55) (Calregulin) (HACBP) (ERp60) (CALBP)
           (Calcium-binding protein 3) (CABP3)
          Length = 416

 Score =  184 bits (468), Expect = 4e-47
 Identities = 87/125 (69%), Positives = 102/125 (81%)
 Frame = +2

Query: 2   DAKFYGISYKLDKPISNRDKTLVVQFQVKHEQTIDCGGGYIKLLGKDVDQKNFHGETPYE 181
           DA+FY +S + + P SN+ +TLVVQF VKHEQ IDCGGGY+KL    +DQK+ HG++ Y 
Sbjct: 71  DARFYALSARFE-PFSNKGQTLVVQFTVKHEQNIDCGGGYVKLFPGGLDQKDMHGDSEYN 129

Query: 182 IMFGPDICGISTKKVHVIFNYKGKNHLIKKDIPCKDDEFSHLYTLILKPDNTYEVLIDLE 361
           IMFGPDICG  TKKVHVIFNYKGKN LI KDI CKDDEF+HLYTLI++PDNTYEV ID  
Sbjct: 130 IMFGPDICGPGTKKVHVIFNYKGKNVLINKDIRCKDDEFTHLYTLIVRPDNTYEVKIDNS 189

Query: 362 KVESG 376
           +VESG
Sbjct: 190 QVESG 194
>sp|P27797|CRTC_HUMAN Calreticulin precursor (CRP55) (Calregulin) (HACBP) (ERp60) (grp60)
          Length = 417

 Score =  182 bits (463), Expect = 2e-46
 Identities = 86/125 (68%), Positives = 100/125 (80%)
 Frame = +2

Query: 2   DAKFYGISYKLDKPISNRDKTLVVQFQVKHEQTIDCGGGYIKLLGKDVDQKNFHGETPYE 181
           DA+FY +S   + P SN+ +TLVVQF VKHEQ IDCGGGY+KL    +DQ + HG++ Y 
Sbjct: 71  DARFYALSASFE-PFSNKGQTLVVQFTVKHEQNIDCGGGYVKLFPNSLDQTDMHGDSEYN 129

Query: 182 IMFGPDICGISTKKVHVIFNYKGKNHLIKKDIPCKDDEFSHLYTLILKPDNTYEVLIDLE 361
           IMFGPDICG  TKKVHVIFNYKGKN LI KDI CKDDEF+HLYTLI++PDNTYEV ID  
Sbjct: 130 IMFGPDICGPGTKKVHVIFNYKGKNVLINKDIRCKDDEFTHLYTLIVRPDNTYEVKIDNS 189

Query: 362 KVESG 376
           +VESG
Sbjct: 190 QVESG 194
>sp|P15253|CRTC_RABIT Calreticulin precursor (CRP55) (Calregulin) (HACBP) (ERp60)
          Length = 418

 Score =  182 bits (463), Expect = 2e-46
 Identities = 86/125 (68%), Positives = 101/125 (80%)
 Frame = +2

Query: 2   DAKFYGISYKLDKPISNRDKTLVVQFQVKHEQTIDCGGGYIKLLGKDVDQKNFHGETPYE 181
           DA+FY +S + + P SN+ + LVVQF VKHEQ IDCGGGY+KL    +DQK+ HG++ Y 
Sbjct: 71  DARFYALSARFE-PFSNKGQPLVVQFTVKHEQNIDCGGGYVKLFPAGLDQKDMHGDSEYN 129

Query: 182 IMFGPDICGISTKKVHVIFNYKGKNHLIKKDIPCKDDEFSHLYTLILKPDNTYEVLIDLE 361
           IMFGPDICG  TKKVHVIFNYKGKN LI KDI CKDDEF+HLYTLI++PDNTYEV ID  
Sbjct: 130 IMFGPDICGPGTKKVHVIFNYKGKNVLINKDIRCKDDEFTHLYTLIVRPDNTYEVKIDNS 189

Query: 362 KVESG 376
           +VESG
Sbjct: 190 QVESG 194
>sp|P52193|CRTC1_BOVIN Calreticulin, brain isoform 1 precursor (CRP55) (Calregulin)
           (HACBP)
          Length = 417

 Score =  181 bits (458), Expect = 6e-46
 Identities = 85/125 (68%), Positives = 101/125 (80%)
 Frame = +2

Query: 2   DAKFYGISYKLDKPISNRDKTLVVQFQVKHEQTIDCGGGYIKLLGKDVDQKNFHGETPYE 181
           DA+FY +S + + P SN+ +TLVVQF VKHEQ IDCGGGY+KL    +DQ + HG++ Y 
Sbjct: 71  DARFYALSARFE-PFSNKGQTLVVQFTVKHEQNIDCGGGYVKLFPAGLDQTDMHGDSEYN 129

Query: 182 IMFGPDICGISTKKVHVIFNYKGKNHLIKKDIPCKDDEFSHLYTLILKPDNTYEVLIDLE 361
           IMFGPDICG  TKKVHVIFNYKGKN LI KDI CKDDEF+HLYTLI++P+NTYEV ID  
Sbjct: 130 IMFGPDICGPGTKKVHVIFNYKGKNVLINKDIRCKDDEFTHLYTLIVRPNNTYEVKIDNS 189

Query: 362 KVESG 376
           +VESG
Sbjct: 190 QVESG 194
>sp|Q9SLY8|CRTC_ORYSA Calreticulin precursor
          Length = 424

 Score =  176 bits (446), Expect = 1e-44
 Identities = 82/125 (65%), Positives = 98/125 (78%)
 Frame = +2

Query: 2   DAKFYGISYKLDKPISNRDKTLVVQFQVKHEQTIDCGGGYIKLLGKDVDQKNFHGETPYE 181
           D +FY IS +  +  SN+DKTLV+QF VKHEQ +DCGGGY+KLLG DVDQK F G+TPY 
Sbjct: 81  DYRFYAISAEYPE-FSNKDKTLVLQFSVKHEQKLDCGGGYVKLLGGDVDQKKFGGDTPYS 139

Query: 182 IMFGPDICGISTKKVHVIFNYKGKNHLIKKDIPCKDDEFSHLYTLILKPDNTYEVLIDLE 361
           IMFGPDICG STKKVH IF    KNHLIKKD+PC+ D+ SH+YTLI+ PD TY +LID  
Sbjct: 140 IMFGPDICGYSTKKVHTIFTKNDKNHLIKKDVPCETDQLSHVYTLIIHPDATYSILIDNV 199

Query: 362 KVESG 376
           + +SG
Sbjct: 200 EKQSG 204
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,377,149
Number of Sequences: 369166
Number of extensions: 776026
Number of successful extensions: 1875
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1726
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1836
length of database: 68,354,980
effective HSP length: 91
effective length of database: 51,544,095
effective search space used: 1700955135
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)