Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_024_D11
(376 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q06814|CRTC_SCHMA Calreticulin precursor (SM4 protein) 197 5e-51
sp|P29413|CRTC_DROME Calreticulin precursor (CRP55) (Calreg... 191 4e-49
sp|P11012|RAL1_ONCVO RAL-1 protein precursor (RAL1 antigen)... 190 8e-49
sp|P14211|CRTC_MOUSE Calreticulin precursor (CRP55) (Calreg... 186 1e-47
sp|Q8K3H7|CRTC_CRIGR Calreticulin precursor (CRP55) (Calreg... 185 3e-47
sp|P18418|CRTC_RAT Calreticulin precursor (CRP55) (Calregul... 184 4e-47
sp|P27797|CRTC_HUMAN Calreticulin precursor (CRP55) (Calreg... 182 2e-46
sp|P15253|CRTC_RABIT Calreticulin precursor (CRP55) (Calreg... 182 2e-46
sp|P52193|CRTC1_BOVIN Calreticulin, brain isoform 1 precurs... 181 6e-46
sp|Q9SLY8|CRTC_ORYSA Calreticulin precursor 176 1e-44
>sp|Q06814|CRTC_SCHMA Calreticulin precursor (SM4 protein)
Length = 393
Score = 197 bits (502), Expect = 5e-51
Identities = 88/125 (70%), Positives = 107/125 (85%)
Frame = +2
Query: 2 DAKFYGISYKLDKPISNRDKTLVVQFQVKHEQTIDCGGGYIKLLGKDVDQKNFHGETPYE 181
DA+FYGI+ K+ +P SNR KT+V+QF VK ++T+ CGG YIKLLG D+D K FHGE+PY+
Sbjct: 68 DARFYGIARKISEPFSNRGKTMVLQFTVKFDKTVSCGGAYIKLLGSDIDPKKFHGESPYK 127
Query: 182 IMFGPDICGISTKKVHVIFNYKGKNHLIKKDIPCKDDEFSHLYTLILKPDNTYEVLIDLE 361
IMFGPDICG++TKKVHVIFNYKGKNHLIKK+IPCKDD +HLYTLI+ P+N YEVL+D
Sbjct: 128 IMFGPDICGMATKKVHVIFNYKGKNHLIKKEIPCKDDLKTHLYTLIVNPNNKYEVLVDNA 187
Query: 362 KVESG 376
KVE G
Sbjct: 188 KVEEG 192
>sp|P29413|CRTC_DROME Calreticulin precursor (CRP55) (Calregulin) (HACBP)
Length = 406
Score = 191 bits (485), Expect = 4e-49
Identities = 91/125 (72%), Positives = 101/125 (80%)
Frame = +2
Query: 2 DAKFYGISYKLDKPISNRDKTLVVQFQVKHEQTIDCGGGYIKLLGKDVDQKNFHGETPYE 181
DA+FY S K D SN DK LVVQF VKHEQ IDCGGGY+KL +DQ + HGE+PYE
Sbjct: 71 DARFYAASRKFDG-FSNEDKPLVVQFSVKHEQNIDCGGGYVKLFDCSLDQTDMHGESPYE 129
Query: 182 IMFGPDICGISTKKVHVIFNYKGKNHLIKKDIPCKDDEFSHLYTLILKPDNTYEVLIDLE 361
IMFGPDICG TKKVHVIF+YKGKNHLI KDI CKDD ++H YTLI++PDNTYEVLID E
Sbjct: 130 IMFGPDICGPGTKKVHVIFSYKGKNHLISKDIRCKDDVYTHFYTLIVRPDNTYEVLIDNE 189
Query: 362 KVESG 376
KVESG
Sbjct: 190 KVESG 194
>sp|P11012|RAL1_ONCVO RAL-1 protein precursor (RAL1 antigen) (41 kDa larval antigen)
Length = 388
Score = 190 bits (483), Expect = 8e-49
Identities = 88/125 (70%), Positives = 101/125 (80%)
Frame = +2
Query: 2 DAKFYGISYKLDKPISNRDKTLVVQFQVKHEQTIDCGGGYIKLLGKDVDQKNFHGETPYE 181
DAKFY I K DK SN+ K+LV+QF VKHEQ IDCGGGY+KL+ DV+ ++ HGETPY
Sbjct: 68 DAKFYSIGAKFDKSFSNKGKSLVIQFSVKHEQDIDCGGGYVKLMASDVNLEDSHGETPYH 127
Query: 182 IMFGPDICGISTKKVHVIFNYKGKNHLIKKDIPCKDDEFSHLYTLILKPDNTYEVLIDLE 361
IMFGPDICG TKKVHVIF+YK +NH+IKKDI CKDD F+HLYTLI+ DNTYEV ID E
Sbjct: 128 IMFGPDICGPGTKKVHVIFHYKDRNHMIKKDIRCKDDVFTHLYTLIVNSDNTYEVQIDGE 187
Query: 362 KVESG 376
K ESG
Sbjct: 188 KAESG 192
>sp|P14211|CRTC_MOUSE Calreticulin precursor (CRP55) (Calregulin) (HACBP) (ERp60)
Length = 416
Score = 186 bits (473), Expect = 1e-47
Identities = 88/125 (70%), Positives = 102/125 (81%)
Frame = +2
Query: 2 DAKFYGISYKLDKPISNRDKTLVVQFQVKHEQTIDCGGGYIKLLGKDVDQKNFHGETPYE 181
DA+FY +S K + P SN+ +TLVVQF VKHEQ IDCGGGY+KL +DQK+ HG++ Y
Sbjct: 71 DARFYALSAKFE-PFSNKGQTLVVQFTVKHEQNIDCGGGYVKLFPSGLDQKDMHGDSEYN 129
Query: 182 IMFGPDICGISTKKVHVIFNYKGKNHLIKKDIPCKDDEFSHLYTLILKPDNTYEVLIDLE 361
IMFGPDICG TKKVHVIFNYKGKN LI KDI CKDDEF+HLYTLI++PDNTYEV ID
Sbjct: 130 IMFGPDICGPGTKKVHVIFNYKGKNVLINKDIRCKDDEFTHLYTLIVRPDNTYEVKIDNS 189
Query: 362 KVESG 376
+VESG
Sbjct: 190 QVESG 194
>sp|Q8K3H7|CRTC_CRIGR Calreticulin precursor (CRP55) (Calregulin) (HACBP) (ERp60)
Length = 417
Score = 185 bits (469), Expect = 3e-47
Identities = 87/125 (69%), Positives = 102/125 (81%)
Frame = +2
Query: 2 DAKFYGISYKLDKPISNRDKTLVVQFQVKHEQTIDCGGGYIKLLGKDVDQKNFHGETPYE 181
DA+FY +S + + P SN+ +TLVVQF VKHEQ IDCGGGY+KL +DQK+ HG++ Y
Sbjct: 71 DARFYALSARFE-PFSNKGQTLVVQFTVKHEQNIDCGGGYVKLFPGSLDQKDMHGDSEYN 129
Query: 182 IMFGPDICGISTKKVHVIFNYKGKNHLIKKDIPCKDDEFSHLYTLILKPDNTYEVLIDLE 361
IMFGPDICG TKKVHVIFNYKGKN LI KDI CKDDEF+HLYTLI++PDNTYEV ID
Sbjct: 130 IMFGPDICGPGTKKVHVIFNYKGKNVLINKDIRCKDDEFTHLYTLIVRPDNTYEVKIDNS 189
Query: 362 KVESG 376
+VESG
Sbjct: 190 QVESG 194
>sp|P18418|CRTC_RAT Calreticulin precursor (CRP55) (Calregulin) (HACBP) (ERp60) (CALBP)
(Calcium-binding protein 3) (CABP3)
Length = 416
Score = 184 bits (468), Expect = 4e-47
Identities = 87/125 (69%), Positives = 102/125 (81%)
Frame = +2
Query: 2 DAKFYGISYKLDKPISNRDKTLVVQFQVKHEQTIDCGGGYIKLLGKDVDQKNFHGETPYE 181
DA+FY +S + + P SN+ +TLVVQF VKHEQ IDCGGGY+KL +DQK+ HG++ Y
Sbjct: 71 DARFYALSARFE-PFSNKGQTLVVQFTVKHEQNIDCGGGYVKLFPGGLDQKDMHGDSEYN 129
Query: 182 IMFGPDICGISTKKVHVIFNYKGKNHLIKKDIPCKDDEFSHLYTLILKPDNTYEVLIDLE 361
IMFGPDICG TKKVHVIFNYKGKN LI KDI CKDDEF+HLYTLI++PDNTYEV ID
Sbjct: 130 IMFGPDICGPGTKKVHVIFNYKGKNVLINKDIRCKDDEFTHLYTLIVRPDNTYEVKIDNS 189
Query: 362 KVESG 376
+VESG
Sbjct: 190 QVESG 194
>sp|P27797|CRTC_HUMAN Calreticulin precursor (CRP55) (Calregulin) (HACBP) (ERp60) (grp60)
Length = 417
Score = 182 bits (463), Expect = 2e-46
Identities = 86/125 (68%), Positives = 100/125 (80%)
Frame = +2
Query: 2 DAKFYGISYKLDKPISNRDKTLVVQFQVKHEQTIDCGGGYIKLLGKDVDQKNFHGETPYE 181
DA+FY +S + P SN+ +TLVVQF VKHEQ IDCGGGY+KL +DQ + HG++ Y
Sbjct: 71 DARFYALSASFE-PFSNKGQTLVVQFTVKHEQNIDCGGGYVKLFPNSLDQTDMHGDSEYN 129
Query: 182 IMFGPDICGISTKKVHVIFNYKGKNHLIKKDIPCKDDEFSHLYTLILKPDNTYEVLIDLE 361
IMFGPDICG TKKVHVIFNYKGKN LI KDI CKDDEF+HLYTLI++PDNTYEV ID
Sbjct: 130 IMFGPDICGPGTKKVHVIFNYKGKNVLINKDIRCKDDEFTHLYTLIVRPDNTYEVKIDNS 189
Query: 362 KVESG 376
+VESG
Sbjct: 190 QVESG 194
>sp|P15253|CRTC_RABIT Calreticulin precursor (CRP55) (Calregulin) (HACBP) (ERp60)
Length = 418
Score = 182 bits (463), Expect = 2e-46
Identities = 86/125 (68%), Positives = 101/125 (80%)
Frame = +2
Query: 2 DAKFYGISYKLDKPISNRDKTLVVQFQVKHEQTIDCGGGYIKLLGKDVDQKNFHGETPYE 181
DA+FY +S + + P SN+ + LVVQF VKHEQ IDCGGGY+KL +DQK+ HG++ Y
Sbjct: 71 DARFYALSARFE-PFSNKGQPLVVQFTVKHEQNIDCGGGYVKLFPAGLDQKDMHGDSEYN 129
Query: 182 IMFGPDICGISTKKVHVIFNYKGKNHLIKKDIPCKDDEFSHLYTLILKPDNTYEVLIDLE 361
IMFGPDICG TKKVHVIFNYKGKN LI KDI CKDDEF+HLYTLI++PDNTYEV ID
Sbjct: 130 IMFGPDICGPGTKKVHVIFNYKGKNVLINKDIRCKDDEFTHLYTLIVRPDNTYEVKIDNS 189
Query: 362 KVESG 376
+VESG
Sbjct: 190 QVESG 194
>sp|P52193|CRTC1_BOVIN Calreticulin, brain isoform 1 precursor (CRP55) (Calregulin)
(HACBP)
Length = 417
Score = 181 bits (458), Expect = 6e-46
Identities = 85/125 (68%), Positives = 101/125 (80%)
Frame = +2
Query: 2 DAKFYGISYKLDKPISNRDKTLVVQFQVKHEQTIDCGGGYIKLLGKDVDQKNFHGETPYE 181
DA+FY +S + + P SN+ +TLVVQF VKHEQ IDCGGGY+KL +DQ + HG++ Y
Sbjct: 71 DARFYALSARFE-PFSNKGQTLVVQFTVKHEQNIDCGGGYVKLFPAGLDQTDMHGDSEYN 129
Query: 182 IMFGPDICGISTKKVHVIFNYKGKNHLIKKDIPCKDDEFSHLYTLILKPDNTYEVLIDLE 361
IMFGPDICG TKKVHVIFNYKGKN LI KDI CKDDEF+HLYTLI++P+NTYEV ID
Sbjct: 130 IMFGPDICGPGTKKVHVIFNYKGKNVLINKDIRCKDDEFTHLYTLIVRPNNTYEVKIDNS 189
Query: 362 KVESG 376
+VESG
Sbjct: 190 QVESG 194
>sp|Q9SLY8|CRTC_ORYSA Calreticulin precursor
Length = 424
Score = 176 bits (446), Expect = 1e-44
Identities = 82/125 (65%), Positives = 98/125 (78%)
Frame = +2
Query: 2 DAKFYGISYKLDKPISNRDKTLVVQFQVKHEQTIDCGGGYIKLLGKDVDQKNFHGETPYE 181
D +FY IS + + SN+DKTLV+QF VKHEQ +DCGGGY+KLLG DVDQK F G+TPY
Sbjct: 81 DYRFYAISAEYPE-FSNKDKTLVLQFSVKHEQKLDCGGGYVKLLGGDVDQKKFGGDTPYS 139
Query: 182 IMFGPDICGISTKKVHVIFNYKGKNHLIKKDIPCKDDEFSHLYTLILKPDNTYEVLIDLE 361
IMFGPDICG STKKVH IF KNHLIKKD+PC+ D+ SH+YTLI+ PD TY +LID
Sbjct: 140 IMFGPDICGYSTKKVHTIFTKNDKNHLIKKDVPCETDQLSHVYTLIIHPDATYSILIDNV 199
Query: 362 KVESG 376
+ +SG
Sbjct: 200 EKQSG 204
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,377,149
Number of Sequences: 369166
Number of extensions: 776026
Number of successful extensions: 1875
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1726
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1836
length of database: 68,354,980
effective HSP length: 91
effective length of database: 51,544,095
effective search space used: 1700955135
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)