Planaria EST Database


DrC_02705

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_02705
         (868 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q920L2|DHSA_RAT  Succinate dehydrogenase [ubiquinone] fla...   423   e-118
sp|Q8K2B3|DHSA_MOUSE  Succinate dehydrogenase [ubiquinone] f...   422   e-118
sp|P31040|DHSA_HUMAN  Succinate dehydrogenase [ubiquinone] f...   421   e-117
sp|Q8HXW3|DHSA_MACFA  Succinate dehydrogenase [ubiquinone] f...   419   e-117
sp|P31039|DHSA_BOVIN  Succinate dehydrogenase [ubiquinone] f...   418   e-116
sp|Q94523|DHSA_DROME  Succinate dehydrogenase [ubiquinone] f...   412   e-115
sp|Q09508|DHSA_CAEEL  Succinate dehydrogenase [ubiquinone] f...   405   e-113
sp|O82663|DHSA_ARATH  Succinate dehydrogenase [ubiquinone] f...   331   1e-90
sp|Q00711|DHSA_YEAST  Succinate dehydrogenase [ubiquinone] f...   328   1e-89
sp|P47052|DHSX_YEAST  Probable succinate dehydrogenase [ubiq...   318   9e-87
>sp|Q920L2|DHSA_RAT Succinate dehydrogenase [ubiquinone] flavoprotein subunit,
            mitochondrial precursor (Fp) (Flavoprotein subunit of
            complex II)
          Length = 656

 Score =  423 bits (1087), Expect = e-118
 Identities = 207/289 (71%), Positives = 241/289 (83%)
 Frame = +1

Query: 1    PHKDHIYLQLSHLPPELLKQRLPGISETAMIFAGVDVTREPIPVLPTVHYNMGGIPTNYK 180
            P KDH+YLQL HLPPE L  RLPGISETAMIFAGVDVT+EPIPVLPTVHYNMGGIPTNYK
Sbjct: 351  PEKDHVYLQLHHLPPEQLATRLPGISETAMIFAGVDVTKEPIPVLPTVHYNMGGIPTNYK 410

Query: 181  GQVITYDENTKRDKIVKGLYAAGEAACTSVHGANRLGANSLLDIVVFGRACALTIAEENK 360
            GQV+ +     +D+IV GLYA GEAAC SVHGANRLGANSLLD+VVFGRACAL+IAE  +
Sbjct: 411  GQVLKHVNG--QDQIVPGLYACGEAACASVHGANRLGANSLLDLVVFGRACALSIAESCR 468

Query: 361  PGESQPDLPKNAGEASIANLDKLRNANGSLSTAEVRLKMQKTMQEHAAVFREGSVLKEGC 540
            PG+  P +  NAGE S+ NLDKLR A+GS+ T+E+RL MQK+MQ HAAVFR GSVL+EGC
Sbjct: 469  PGDKVPPIKANAGEESVMNLDKLRFADGSVRTSELRLSMQKSMQSHAAVFRVGSVLQEGC 528

Query: 541  KKVLDIYQNDMTKLKLFDRSMIWNSDLVEALELQNLMLNSLQTIYGAENRKESRGAHSRE 720
            +KV  +Y  D+  LK FDR M+WN+DLVE LELQNLML +LQTIYGAE RKESRGAH+RE
Sbjct: 529  EKVSQLY-GDLQHLKTFDRGMVWNTDLVETLELQNLMLCALQTIYGAEARKESRGAHARE 587

Query: 721  DFKTRIDEYDYSKPLEGQTKKPIEQHWRKHSLLFQNVETGEVKISYRPV 867
            D+K RIDEYDYSKP+EGQ KKP  +HWRKH+L + + +TG+V + YRPV
Sbjct: 588  DYKVRIDEYDYSKPIEGQQKKPFAEHWRKHTLSYVDTKTGKVTLDYRPV 636
>sp|Q8K2B3|DHSA_MOUSE Succinate dehydrogenase [ubiquinone] flavoprotein subunit,
            mitochondrial precursor (Fp) (Flavoprotein subunit of
            complex II)
          Length = 664

 Score =  422 bits (1086), Expect = e-118
 Identities = 204/289 (70%), Positives = 242/289 (83%)
 Frame = +1

Query: 1    PHKDHIYLQLSHLPPELLKQRLPGISETAMIFAGVDVTREPIPVLPTVHYNMGGIPTNYK 180
            P KDH+YLQL HLPPE L  RLPGISETAMIFAGVDVT+EPIPVLPTVHYNMGGIPTNYK
Sbjct: 359  PEKDHVYLQLHHLPPEQLATRLPGISETAMIFAGVDVTKEPIPVLPTVHYNMGGIPTNYK 418

Query: 181  GQVITYDENTKRDKIVKGLYAAGEAACTSVHGANRLGANSLLDIVVFGRACALTIAEENK 360
            GQV+ +     +D+IV GLYA GEAAC SVHGANRLGANSLLD+VVFGRACAL+IAE  +
Sbjct: 419  GQVLKHVNG--QDQIVPGLYACGEAACASVHGANRLGANSLLDLVVFGRACALSIAESCR 476

Query: 361  PGESQPDLPKNAGEASIANLDKLRNANGSLSTAEVRLKMQKTMQEHAAVFREGSVLKEGC 540
            PG+  P +  NAGE S+ NLDKLR A+GS+ T+E+RL MQK+MQ HAAVFR GSVL+EGC
Sbjct: 477  PGDKVPSIKANAGEESVMNLDKLRFADGSIRTSELRLNMQKSMQNHAAVFRVGSVLQEGC 536

Query: 541  KKVLDIYQNDMTKLKLFDRSMIWNSDLVEALELQNLMLNSLQTIYGAENRKESRGAHSRE 720
            +K+  +Y  D+  LK FDR M+WN+DLVE LELQNLML +LQTIYGAE RKESRGAH+RE
Sbjct: 537  EKISQLY-GDLKHLKTFDRGMVWNTDLVETLELQNLMLCALQTIYGAEARKESRGAHARE 595

Query: 721  DFKTRIDEYDYSKPLEGQTKKPIEQHWRKHSLLFQNVETGEVKISYRPV 867
            D+K R+DEYDYSKP++GQ KKP  +HWRKH+L + +++TG+V + YRPV
Sbjct: 596  DYKVRVDEYDYSKPIQGQQKKPFGEHWRKHTLSYVDIKTGKVTLEYRPV 644
>sp|P31040|DHSA_HUMAN Succinate dehydrogenase [ubiquinone] flavoprotein subunit,
            mitochondrial precursor (Fp) (Flavoprotein subunit of
            complex II)
          Length = 664

 Score =  421 bits (1082), Expect = e-117
 Identities = 206/289 (71%), Positives = 240/289 (83%)
 Frame = +1

Query: 1    PHKDHIYLQLSHLPPELLKQRLPGISETAMIFAGVDVTREPIPVLPTVHYNMGGIPTNYK 180
            P KDH+YLQL HLPPE L  RLPGISETAMIFAGVDVT+EPIPVLPTVHYNMGGIPTNYK
Sbjct: 359  PEKDHVYLQLHHLPPEQLATRLPGISETAMIFAGVDVTKEPIPVLPTVHYNMGGIPTNYK 418

Query: 181  GQVITYDENTKRDKIVKGLYAAGEAACTSVHGANRLGANSLLDIVVFGRACALTIAEENK 360
            GQV+ +     +D+IV GLYA GEAAC SVHGANRLGANSLLD+VVFGRACAL+I E  +
Sbjct: 419  GQVLRHVNG--QDQIVPGLYACGEAACASVHGANRLGANSLLDLVVFGRACALSIEESCR 476

Query: 361  PGESQPDLPKNAGEASIANLDKLRNANGSLSTAEVRLKMQKTMQEHAAVFREGSVLKEGC 540
            PG+  P +  NAGE S+ NLDKLR A+GS+ T+E+RL MQK+MQ HAAVFR GSVL+EGC
Sbjct: 477  PGDKVPPIKPNAGEESVMNLDKLRFADGSIRTSELRLSMQKSMQNHAAVFRVGSVLQEGC 536

Query: 541  KKVLDIYQNDMTKLKLFDRSMIWNSDLVEALELQNLMLNSLQTIYGAENRKESRGAHSRE 720
             K+  +Y  D+  LK FDR M+WN+DLVE LELQNLML +LQTIYGAE RKESRGAH+RE
Sbjct: 537  GKISKLY-GDLKHLKTFDRGMVWNTDLVETLELQNLMLCALQTIYGAEARKESRGAHARE 595

Query: 721  DFKTRIDEYDYSKPLEGQTKKPIEQHWRKHSLLFQNVETGEVKISYRPV 867
            D+K RIDEYDYSKP++GQ KKP E+HWRKH+L + +V TG+V + YRPV
Sbjct: 596  DYKVRIDEYDYSKPIQGQQKKPFEEHWRKHTLSYVDVGTGKVTLEYRPV 644
>sp|Q8HXW3|DHSA_MACFA Succinate dehydrogenase [ubiquinone] flavoprotein subunit,
            mitochondrial precursor (Fp) (Flavoprotein subunit of
            complex II)
          Length = 664

 Score =  419 bits (1078), Expect = e-117
 Identities = 205/289 (70%), Positives = 239/289 (82%)
 Frame = +1

Query: 1    PHKDHIYLQLSHLPPELLKQRLPGISETAMIFAGVDVTREPIPVLPTVHYNMGGIPTNYK 180
            P KDH+YLQL HLPPE L  RLPGISETAMIFAGVDVT+EPIPVLPTVHYNMGGIPTNYK
Sbjct: 359  PEKDHVYLQLHHLPPEQLATRLPGISETAMIFAGVDVTKEPIPVLPTVHYNMGGIPTNYK 418

Query: 181  GQVITYDENTKRDKIVKGLYAAGEAACTSVHGANRLGANSLLDIVVFGRACALTIAEENK 360
            GQV+ +     +D+IV GLYA GEAAC SVHGANRLGANSL D+VVFGRACAL+I E  +
Sbjct: 419  GQVLRHVNG--QDQIVPGLYACGEAACASVHGANRLGANSLWDLVVFGRACALSIEESCR 476

Query: 361  PGESQPDLPKNAGEASIANLDKLRNANGSLSTAEVRLKMQKTMQEHAAVFREGSVLKEGC 540
            PG+  P +  NAGE S+ NLDKLR A+GS+ T+E+RL MQK+MQ HAAVFR GSVL+EGC
Sbjct: 477  PGDKVPPIKPNAGEESVMNLDKLRFADGSIRTSELRLSMQKSMQNHAAVFRVGSVLQEGC 536

Query: 541  KKVLDIYQNDMTKLKLFDRSMIWNSDLVEALELQNLMLNSLQTIYGAENRKESRGAHSRE 720
             K+  +Y  D+  LK FDR M+WN+DLVE LELQNLML +LQTIYGAE RKESRGAH+RE
Sbjct: 537  GKISKLY-GDLKHLKTFDRGMVWNTDLVETLELQNLMLCALQTIYGAEARKESRGAHARE 595

Query: 721  DFKTRIDEYDYSKPLEGQTKKPIEQHWRKHSLLFQNVETGEVKISYRPV 867
            D+K RIDEYDYSKP++GQ KKP E+HWRKH+L + +V TG+V + YRPV
Sbjct: 596  DYKARIDEYDYSKPIQGQQKKPFEEHWRKHTLSYVDVSTGKVTLEYRPV 644
>sp|P31039|DHSA_BOVIN Succinate dehydrogenase [ubiquinone] flavoprotein subunit,
            mitochondrial precursor (Fp) (Flavoprotein subunit of
            complex II)
          Length = 665

 Score =  418 bits (1074), Expect = e-116
 Identities = 204/289 (70%), Positives = 238/289 (82%)
 Frame = +1

Query: 1    PHKDHIYLQLSHLPPELLKQRLPGISETAMIFAGVDVTREPIPVLPTVHYNMGGIPTNYK 180
            P KDH+YLQL HLPP  L  RLPGISETAMIFAGVDVT+EPIPVLPTVHYNMGGIPTNYK
Sbjct: 360  PEKDHVYLQLHHLPPAQLAMRLPGISETAMIFAGVDVTKEPIPVLPTVHYNMGGIPTNYK 419

Query: 181  GQVITYDENTKRDKIVKGLYAAGEAACTSVHGANRLGANSLLDIVVFGRACALTIAEENK 360
            GQV+ +     +D+ V GLYA GEAAC SVHGANRLGANSLLD+VVFGRACAL+IAE  +
Sbjct: 420  GQVLRHVNG--QDQGVPGLYACGEAACASVHGANRLGANSLLDLVVFGRACALSIAESCR 477

Query: 361  PGESQPDLPKNAGEASIANLDKLRNANGSLSTAEVRLKMQKTMQEHAAVFREGSVLKEGC 540
            PG+  P +  NAGE S+ NLDKLR ANGS+ T+E+RL MQK+MQ HAAVFR GSVL+EGC
Sbjct: 478  PGDKVPSIKPNAGEESVMNLDKLRFANGSIRTSELRLNMQKSMQSHAAVFRVGSVLQEGC 537

Query: 541  KKVLDIYQNDMTKLKLFDRSMIWNSDLVEALELQNLMLNSLQTIYGAENRKESRGAHSRE 720
            +K+  +Y  D+  LK FDR M+WN+DLVE LELQNLML +LQTIYGAE RKESRG   RE
Sbjct: 538  EKISSLY-GDLRHLKTFDRGMVWNTDLVETLELQNLMLCALQTIYGAEARKESRGGPRRE 596

Query: 721  DFKTRIDEYDYSKPLEGQTKKPIEQHWRKHSLLFQNVETGEVKISYRPV 867
            DFK R+DEYDYSKP++GQ KKP EQHWRKH+L + +++TG+V + YRPV
Sbjct: 597  DFKERVDEYDYSKPIQGQQKKPFEQHWRKHTLSYVDIKTGKVTLEYRPV 645
>sp|Q94523|DHSA_DROME Succinate dehydrogenase [ubiquinone] flavoprotein subunit,
            mitochondrial precursor (FP) (Flavoprotein subunit of
            complex II)
          Length = 661

 Score =  412 bits (1059), Expect = e-115
 Identities = 203/289 (70%), Positives = 242/289 (83%)
 Frame = +1

Query: 1    PHKDHIYLQLSHLPPELLKQRLPGISETAMIFAGVDVTREPIPVLPTVHYNMGGIPTNYK 180
            P KDH+YLQL HLPP+ L +RLPGISETAMIFAGVDVTREPIPVLPTVHYNMGG+PTNY+
Sbjct: 356  PEKDHVYLQLHHLPPKQLAERLPGISETAMIFAGVDVTREPIPVLPTVHYNMGGVPTNYR 415

Query: 181  GQVITYDENTKRDKIVKGLYAAGEAACTSVHGANRLGANSLLDIVVFGRACALTIAEENK 360
            GQVIT D++ K D IV GLYAAGEAA +SVHGANRLGANSLLD+VVFGRACA TIAE NK
Sbjct: 416  GQVITIDKDGK-DVIVPGLYAAGEAASSSVHGANRLGANSLLDLVVFGRACAKTIAELNK 474

Query: 361  PGESQPDLPKNAGEASIANLDKLRNANGSLSTAEVRLKMQKTMQEHAAVFREGSVLKEGC 540
            PG   P L +NAGEAS+ANLDKLR+ANG ++TA++RLKMQKTMQ HAAVFR+G +L++G 
Sbjct: 475  PGAPAPTLKENAGEASVANLDKLRHANGQITTADLRLKMQKTMQHHAAVFRDGPILQDGV 534

Query: 541  KKVLDIYQNDMTKLKLFDRSMIWNSDLVEALELQNLMLNSLQTIYGAENRKESRGAHSRE 720
             K+ +IY+     +K+ DRS+IWNSDLVE LELQNL+ N+  TI  AE RKESRGAH+RE
Sbjct: 535  NKMKEIYK-QFKDIKVVDRSLIWNSDLVETLELQNLLANAQMTIVSAEARKESRGAHARE 593

Query: 721  DFKTRIDEYDYSKPLEGQTKKPIEQHWRKHSLLFQNVETGEVKISYRPV 867
            DFK R DEYD+SKPL+GQ KKP++QHWRKH+L +   + G++ + YR V
Sbjct: 594  DFKVREDEYDFSKPLDGQQKKPMDQHWRKHTLSWVCNDNGDITLDYRNV 642
>sp|Q09508|DHSA_CAEEL Succinate dehydrogenase [ubiquinone] flavoprotein subunit,
            mitochondrial precursor (FP) (Flavoprotein subunit of
            complex II)
          Length = 646

 Score =  405 bits (1042), Expect = e-113
 Identities = 194/289 (67%), Positives = 234/289 (80%)
 Frame = +1

Query: 1    PHKDHIYLQLSHLPPELLKQRLPGISETAMIFAGVDVTREPIPVLPTVHYNMGGIPTNYK 180
            P KDHIYLQL HLP E L+QRLPGISETAMIFAGVDVT+EPIPV+PTVHYNMGG+PTNYK
Sbjct: 340  PDKDHIYLQLHHLPAEQLQQRLPGISETAMIFAGVDVTKEPIPVIPTVHYNMGGVPTNYK 399

Query: 181  GQVITYDENTKRDKIVKGLYAAGEAACTSVHGANRLGANSLLDIVVFGRACALTIAEENK 360
            GQV+ Y    K D++V GLYAAGE    SVHGANRLGANSLLD+V+FGRACA+ I +   
Sbjct: 400  GQVLNYTPK-KGDEVVPGLYAAGECGAHSVHGANRLGANSLLDLVIFGRACAIDILKNTS 458

Query: 361  PGESQPDLPKNAGEASIANLDKLRNANGSLSTAEVRLKMQKTMQEHAAVFREGSVLKEGC 540
             G   P+LPKNAGEAS+AN+DKLR+  G +STAE+RL MQK+MQ HAAVFR G +LKEG 
Sbjct: 459  AGVGVPELPKNAGEASVANIDKLRHNKGDISTAELRLTMQKSMQNHAAVFRRGDILKEGV 518

Query: 541  KKVLDIYQNDMTKLKLFDRSMIWNSDLVEALELQNLMLNSLQTIYGAENRKESRGAHSRE 720
            K +  +Y+ D   L + D+ ++WNSDL+E LELQNL++N+ QTI  AENR+ESRGAH+R+
Sbjct: 519  KVLSKLYK-DQAHLNVADKGLVWNSDLIETLELQNLLINATQTIVAAENREESRGAHARD 577

Query: 721  DFKTRIDEYDYSKPLEGQTKKPIEQHWRKHSLLFQNVETGEVKISYRPV 867
            DF  R+DE DYSKPLEGQTKK ++ HWRKHS++  N+ETGEV + YRPV
Sbjct: 578  DFPDRLDELDYSKPLEGQTKKELKDHWRKHSIIRSNIETGEVSLDYRPV 626
>sp|O82663|DHSA_ARATH Succinate dehydrogenase [ubiquinone] flavoprotein subunit,
            mitochondrial (FP) (Flavoprotein subunit of complex II)
          Length = 634

 Score =  331 bits (849), Expect = 1e-90
 Identities = 174/289 (60%), Positives = 213/289 (73%)
 Frame = +1

Query: 1    PHKDHIYLQLSHLPPELLKQRLPGISETAMIFAGVDVTREPIPVLPTVHYNMGGIPTNYK 180
            PHKDHIYL L+HLPPE+LK+RLPGISETA IFAGVDVT+EPIPVLPTVHYNMGGIPTNY 
Sbjct: 348  PHKDHIYLHLNHLPPEVLKERLPGISETAAIFAGVDVTKEPIPVLPTVHYNMGGIPTNYH 407

Query: 181  GQVITYDENTKRDKIVKGLYAAGEAACTSVHGANRLGANSLLDIVVFGRACALTIAEENK 360
            G+V+T  +    D ++ GL AAGEAAC SVHGANRLGANSLLDIVVFGRACA  +AE +K
Sbjct: 408  GEVVTI-KGDDPDAVIPGLMAAGEAACASVHGANRLGANSLLDIVVFGRACANRVAEISK 466

Query: 361  PGESQPDLPKNAGEASIANLDKLRNANGSLSTAEVRLKMQKTMQEHAAVFREGSVLKEGC 540
            PGE Q  L K+AGE +IA LD+LRN+NGSL T+ +RL MQ+ MQ +AAVFR    L+EGC
Sbjct: 467  PGEKQKPLEKDAGEKTIAWLDRLRNSNGSLPTSTIRLNMQRIMQNNAAVFRTQETLEEGC 526

Query: 541  KKVLDIYQNDMTKLKLFDRSMIWNSDLVEALELQNLMLNSLQTIYGAENRKESRGAHSRE 720
             +++D        +++ DRSMIWNSDL+E LEL+NL++N+  T++ AE RKESRGAH+RE
Sbjct: 527  -QLIDKAWESFGDVQVKDRSMIWNSDLIETLELENLLINASITMHSAEARKESRGAHARE 585

Query: 721  DFKTRIDEYDYSKPLEGQTKKPIEQHWRKHSLLFQNVETGEVKISYRPV 867
            DF  R D                   W KH+L +   E  +V++ YRPV
Sbjct: 586  DFTKRED-----------------GEWMKHTLGYW--EDEKVRLDYRPV 615
>sp|Q00711|DHSA_YEAST Succinate dehydrogenase [ubiquinone] flavoprotein subunit,
            mitochondrial precursor (FP) (Flavoprotein subunit of
            complex II)
          Length = 640

 Score =  328 bits (841), Expect = 1e-89
 Identities = 169/287 (58%), Positives = 204/287 (71%)
 Frame = +1

Query: 7    KDHIYLQLSHLPPELLKQRLPGISETAMIFAGVDVTREPIPVLPTVHYNMGGIPTNYKGQ 186
            KDH+YLQLSHLPPE+LK+RLPGISETA IFAGVDVT+EPIP++PTVHYNMGGIPT + G+
Sbjct: 352  KDHMYLQLSHLPPEVLKERLPGISETAAIFAGVDVTKEPIPIIPTVHYNMGGIPTKWNGE 411

Query: 187  VITYDENTKRDKIVKGLYAAGEAACTSVHGANRLGANSLLDIVVFGRACALTIAEENKPG 366
             +T DE T  DK++ GL A GEAAC SVHGANRLGANSLLD+VVFGRA A T+A+  +PG
Sbjct: 412  ALTIDEETGEDKVIPGLMACGEAACVSVHGANRLGANSLLDLVVFGRAVAHTVADTLQPG 471

Query: 367  ESQPDLPKNAGEASIANLDKLRNANGSLSTAEVRLKMQKTMQEHAAVFREGSVLKEGCKK 546
                 LP + G+ SIANLDKLRNANGS STAE+R+ M++TMQ+  +VFR  S L EG + 
Sbjct: 472  LPHKPLPSDLGKESIANLDKLRNANGSRSTAEIRMNMKQTMQKDVSVFRTQSSLDEGVRN 531

Query: 547  VLDIYQNDMTKLKLFDRSMIWNSDLVEALELQNLMLNSLQTIYGAENRKESRGAHSREDF 726
            +  + +     +K  DRSMIWNSDLVE LELQNL+  + QT   A NRKESRGAH+RED+
Sbjct: 532  ITAV-EKTFDDVKTTDRSMIWNSDLVETLELQNLLTCASQTAVSAANRKESRGAHAREDY 590

Query: 727  KTRIDEYDYSKPLEGQTKKPIEQHWRKHSLLFQNVETGEVKISYRPV 867
              R DE                 HW KH+L +Q      V + YR V
Sbjct: 591  PNRDDE-----------------HWMKHTLSWQKDVAAPVTLKYRRV 620
>sp|P47052|DHSX_YEAST Probable succinate dehydrogenase [ubiquinone] flavoprotein subunit 2,
            mitochondrial precursor (FP) (Flavoprotein subunit of
            complex II)
          Length = 634

 Score =  318 bits (816), Expect = 9e-87
 Identities = 166/288 (57%), Positives = 201/288 (69%)
 Frame = +1

Query: 4    HKDHIYLQLSHLPPELLKQRLPGISETAMIFAGVDVTREPIPVLPTVHYNMGGIPTNYKG 183
            +KDHI LQLSHLPPE+LK+RLPGISETA +FAGVDVT+EPIPVLPTVHYNMGGIPT + G
Sbjct: 345  NKDHILLQLSHLPPEVLKERLPGISETAAVFAGVDVTQEPIPVLPTVHYNMGGIPTKWTG 404

Query: 184  QVITYDENTKRDKIVKGLYAAGEAACTSVHGANRLGANSLLDIVVFGRACALTIAEENKP 363
            + +T DE T  DK++ GL A GEAAC SVHGANRLGANSLLD+VVFGRA A TIA+  +P
Sbjct: 405  EALTIDEETGEDKVIPGLMACGEAACVSVHGANRLGANSLLDLVVFGRAVANTIADTLQP 464

Query: 364  GESQPDLPKNAGEASIANLDKLRNANGSLSTAEVRLKMQKTMQEHAAVFREGSVLKEGCK 543
            G     L  N G  SIANLDK+RNA GSL T+++RL MQ+TMQ+  +VFR    L EG +
Sbjct: 465  GLPHKPLASNIGHESIANLDKVRNARGSLKTSQIRLNMQRTMQKDVSVFRTQDTLDEGVR 524

Query: 544  KVLDIYQNDMTKLKLFDRSMIWNSDLVEALELQNLMLNSLQTIYGAENRKESRGAHSRED 723
             + ++       + + D+SMIWNSDLVE LELQNL+  + QT   A  RKESRGAH+RED
Sbjct: 525  NITEV-DKTFEDVHVSDKSMIWNSDLVETLELQNLLTCATQTAVSASKRKESRGAHARED 583

Query: 724  FKTRIDEYDYSKPLEGQTKKPIEQHWRKHSLLFQNVETGEVKISYRPV 867
            +  R D                  +WRKH+L +Q   +  VKI YR V
Sbjct: 584  YAKRDD-----------------VNWRKHTLSWQKGTSTPVKIKYRNV 614
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.315    0.133    0.381 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 101,164,767
Number of Sequences: 369166
Number of extensions: 2083209
Number of successful extensions: 4338
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4070
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4206
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 8550075140
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)