Planaria EST Database


DrC_02655

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_02655
         (444 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P43619|NADC_YEAST  Nicotinate-nucleotide pyrophosphorylas...   138   6e-33
sp|Q91X91|NADC_MOUSE  Nicotinate-nucleotide pyrophosphorylas...   128   6e-30
sp|Q15274|NADC_HUMAN  Nicotinate-nucleotide pyrophosphorylas...   123   2e-28
sp|P74301|NADC_SYNY3  Probable nicotinate-nucleotide pyropho...    92   7e-19
sp|O28439|NADC_ARCFU  Probable nicotinate-nucleotide pyropho...    89   6e-18
sp|P77938|NADC_RHORU  Probable nicotinate-nucleotide pyropho...    88   7e-18
sp|O27860|NADC_METTH  Probable nicotinate-nucleotide pyropho...    84   2e-16
sp|P39666|NADC_BACSU  Probable nicotinate-nucleotide pyropho...    79   6e-15
sp|Q57916|NADC_METJA  Probable nicotinate-nucleotide pyropho...    77   2e-14
sp|P30819|NADC_PSEAE  Nicotinate-nucleotide pyrophosphorylas...    77   2e-14
>sp|P43619|NADC_YEAST Nicotinate-nucleotide pyrophosphorylase [carboxylating]
           (Quinolinate phosphoribosyltransferase
           [decarboxylating]) (QAPRTase)
          Length = 295

 Score =  138 bits (347), Expect = 6e-33
 Identities = 70/137 (51%), Positives = 96/137 (70%), Gaps = 7/137 (5%)
 Frame = +2

Query: 5   GLPFAEAVFKYFDCVVEWKNVEGSFI------AKPTVIGMVKGPANKILMAERTSLNILT 166
           G+PFA+ VF   +  VEW   EGSF+      +   V+  + GPA  IL+AERT+LNIL+
Sbjct: 55  GVPFAQEVFNQCELQVEWLFKEGSFLEPSKNDSGKIVVAKITGPAKNILLAERTALNILS 114

Query: 167 RACGVATVANRLSSKLKPT-WKGELTGSRKTTPGFRIVEKYAMYIGGISTHRYDLSSMVM 343
           R+ G+AT ++++ S  + T +KG + G+RKTTPG R +EKY+M +GG  THRYDLSSMVM
Sbjct: 115 RSSGIATASHKIISLARSTGYKGTIAGTRKTTPGLRRLEKYSMLVGGCDTHRYDLSSMVM 174

Query: 344 VKDNHVKANGSIENPLK 394
           +KDNH+ A GSI N +K
Sbjct: 175 LKDNHIWATGSITNAVK 191
>sp|Q91X91|NADC_MOUSE Nicotinate-nucleotide pyrophosphorylase [carboxylating]
           (Quinolinate phosphoribosyltransferase
           [decarboxylating]) (QAPRTase) (QPRTase)
          Length = 299

 Score =  128 bits (321), Expect = 6e-30
 Identities = 63/128 (49%), Positives = 82/128 (64%), Gaps = 1/128 (0%)
 Frame = +2

Query: 2   AGLPFAEAVFKYFDCVVEWKNVEGSFIAKPTVIGMVKGPANKILMAERTSLNILTRACGV 181
           AG PF +A+F   +C V W   EGS +     +  VKGPA+ +L+ ER +LN L R  G+
Sbjct: 55  AGRPFFDAIFTQLNCQVSWFLPEGSKLVPVVKVAEVKGPAHHLLLGERVALNTLARCSGI 114

Query: 182 ATVANRLSSKLKPT-WKGELTGSRKTTPGFRIVEKYAMYIGGISTHRYDLSSMVMVKDNH 358
           A+ A       + T W G + G+RKTTPGFR+VEKY + +GG + HRYDL  MVMVKDNH
Sbjct: 115 ASAAATAVEVARSTGWTGHVAGTRKTTPGFRLVEKYGLQVGGAACHRYDLGGMVMVKDNH 174

Query: 359 VKANGSIE 382
           V A GS+E
Sbjct: 175 VVAAGSME 182
>sp|Q15274|NADC_HUMAN Nicotinate-nucleotide pyrophosphorylase [carboxylating]
           (Quinolinate phosphoribosyltransferase
           [decarboxylating]) (QAPRTase) (QPRTase)
          Length = 297

 Score =  123 bits (309), Expect = 2e-28
 Identities = 59/132 (44%), Positives = 83/132 (62%), Gaps = 1/132 (0%)
 Frame = +2

Query: 2   AGLPFAEAVFKYFDCVVEWKNVEGSFIAKPTVIGMVKGPANKILMAERTSLNILTRACGV 181
           AG PF +A+F   +C V W   EGS +     +  V+GPA+ +L+ ER +LN L R  G+
Sbjct: 55  AGQPFFDAIFTQLNCQVSWFLPEGSKLVPVARVAEVRGPAHCLLLGERVALNTLARCSGI 114

Query: 182 ATVANRLSSKLKPT-WKGELTGSRKTTPGFRIVEKYAMYIGGISTHRYDLSSMVMVKDNH 358
           A+ A       +   W G + G+RKTTPGFR+VEKY + +GG ++HRYDL  +VMVKDNH
Sbjct: 115 ASAAAAAVEAARGAGWTGHVAGTRKTTPGFRLVEKYGLLVGGAASHRYDLGGLVMVKDNH 174

Query: 359 VKANGSIENPLK 394
           V A G +E  ++
Sbjct: 175 VVAAGGVEKAVR 186
>sp|P74301|NADC_SYNY3 Probable nicotinate-nucleotide pyrophosphorylase [carboxylating]
           (Quinolinate phosphoribosyltransferase
           [decarboxylating]) (QAPRTase)
          Length = 295

 Score = 91.7 bits (226), Expect = 7e-19
 Identities = 50/138 (36%), Positives = 76/138 (55%), Gaps = 2/138 (1%)
 Frame = +2

Query: 2   AGLPFAEAVFKYFDCVVEWKNV--EGSFIAKPTVIGMVKGPANKILMAERTSLNILTRAC 175
           AGLP A  +F+  D  +E++ +  EG  +   TV+  + G    +L  ER +LN++    
Sbjct: 62  AGLPMAARIFQLLDPSMEFQVLAGEGQAVTASTVVATMAGNLGSLLTGERVALNLVMGLS 121

Query: 176 GVATVANRLSSKLKPTWKGELTGSRKTTPGFRIVEKYAMYIGGISTHRYDLSSMVMVKDN 355
           G+AT+  +    +   +      +RKTTPG R++EKYA  +GG   HR  L   VMVKDN
Sbjct: 122 GIATMTRQYVQAIAD-YPTRFVDTRKTTPGLRVLEKYASRLGGAMNHRLGLDDAVMVKDN 180

Query: 356 HVKANGSIENPLKF*NQN 409
           H++A GSI   ++   QN
Sbjct: 181 HIQAAGSITKAVQTLRQN 198
>sp|O28439|NADC_ARCFU Probable nicotinate-nucleotide pyrophosphorylase [carboxylating]
           (Quinolinate phosphoribosyltransferase
           [decarboxylating]) (QAPRTase)
          Length = 258

 Score = 88.6 bits (218), Expect = 6e-18
 Identities = 49/132 (37%), Positives = 75/132 (56%), Gaps = 1/132 (0%)
 Frame = +2

Query: 2   AGLPFAEAVFKYFDCVVEWKNVEGSFIAKPTVIGMVKGPANKILMAERTSLNILTRACGV 181
           AG+   + +F   + VV     +G  I    V+  ++G ++ IL  ER ++NIL R  G+
Sbjct: 27  AGVGVVKILFDLAEIVVMESKKDGEPIKPGDVVMRLRGKSDSILATERLAINILMRMSGI 86

Query: 182 ATVANRLSSKLKPTW-KGELTGSRKTTPGFRIVEKYAMYIGGISTHRYDLSSMVMVKDNH 358
           AT   ++  + +    K  +  +RKTTPGFRI EK A+ IGG   HR+ LS  +M+KDNH
Sbjct: 87  ATATAKMVERARRVNPKVVVAATRKTTPGFRIFEKMAVEIGGGDAHRFSLSDCLMLKDNH 146

Query: 359 VKANGSIENPLK 394
           +   GS+E  +K
Sbjct: 147 IAVAGSLERAMK 158
>sp|P77938|NADC_RHORU Probable nicotinate-nucleotide pyrophosphorylase [carboxylating]
           (Quinolinate phosphoribosyltransferase
           [decarboxylating]) (QAPRTase)
          Length = 296

 Score = 88.2 bits (217), Expect = 7e-18
 Identities = 53/132 (40%), Positives = 70/132 (53%), Gaps = 2/132 (1%)
 Frame = +2

Query: 2   AGLPFAEAVFKYFDCVVEWKNV--EGSFIAKPTVIGMVKGPANKILMAERTSLNILTRAC 175
           AGL  A + F   D  V +     +G+ IA    +  V G A  IL AERT+LN L    
Sbjct: 58  AGLGCARSAFALLDDTVTFTTPLEDGAEIAAGQTVAEVAGAARTILAAERTALNFLGHLS 117

Query: 176 GVATVANRLSSKLKPTWKGELTGSRKTTPGFRIVEKYAMYIGGISTHRYDLSSMVMVKDN 355
           G+AT   R    +  T +  LT +RKTTPG R +EKYA+  GG S HR+ L   V++KDN
Sbjct: 118 GIATRTRRFGDAIAHT-RARLTCTRKTTPGLRGLEKYAVRCGGGSNHRFGLDDAVLIKDN 176

Query: 356 HVKANGSIENPL 391
           H+   G +   L
Sbjct: 177 HIAVAGGVSAAL 188
>sp|O27860|NADC_METTH Probable nicotinate-nucleotide pyrophosphorylase [carboxylating]
           (Quinolinate phosphoribosyltransferase
           [decarboxylating]) (QAPRTase)
          Length = 279

 Score = 83.6 bits (205), Expect = 2e-16
 Identities = 46/133 (34%), Positives = 78/133 (58%), Gaps = 2/133 (1%)
 Frame = +2

Query: 2   AGLPFAEAVFKYFDC-VVEWKNVEGSFIAKPTVIGMVKGPANKILMAERTSLNILTRACG 178
           AG+  AE + + F   ++ WK+ +G  ++    +  ++G A  ILM ERT LN++ +  G
Sbjct: 43  AGVEVAEMMAREFSISIIRWKD-DGDPLSGGERVLTLEGDAMDILMVERTMLNLMMKMSG 101

Query: 179 VATVANRLSSKLKPTWKG-ELTGSRKTTPGFRIVEKYAMYIGGISTHRYDLSSMVMVKDN 355
           +AT+   +  + +   +G  +  +RKTTPG +  EK A+ IGG  THR+ L    M+KDN
Sbjct: 102 IATLTRSMLQRARAVNEGIRIAATRKTTPGLQWFEKQAVRIGGGDTHRFRLDDCAMIKDN 161

Query: 356 HVKANGSIENPLK 394
           H+   G+IE+ ++
Sbjct: 162 HIAIVGNIEDAVR 174
>sp|P39666|NADC_BACSU Probable nicotinate-nucleotide pyrophosphorylase [carboxylating]
           (Quinolinate phosphoribosyltransferase
           [decarboxylating]) (QAPRTase) (General stress protein
           70) (GSP70)
          Length = 289

 Score = 78.6 bits (192), Expect = 6e-15
 Identities = 42/104 (40%), Positives = 63/104 (60%)
 Frame = +2

Query: 68  EGSFIAKPTVIGMVKGPANKILMAERTSLNILTRACGVATVANRLSSKLKPTWKGELTGS 247
           +G  + K  VI  + GPA  +L  ER  LN++ R  G+AT+  R + +     + ++  +
Sbjct: 71  DGDMLHKGEVIAELHGPAAALLSGERVVLNLIQRLSGIATMT-REAVRCLDDEQIKICDT 129

Query: 248 RKTTPGFRIVEKYAMYIGGISTHRYDLSSMVMVKDNHVKANGSI 379
           RKTTPG R++EKYA+  GG   HR+ L   +M+KDNH+ A GSI
Sbjct: 130 RKTTPGLRMLEKYAVRAGGGYNHRFGLYDGIMIKDNHIAACGSI 173
>sp|Q57916|NADC_METJA Probable nicotinate-nucleotide pyrophosphorylase [carboxylating]
           (Quinolinate phosphoribosyltransferase
           [decarboxylating]) (QAPRTase)
          Length = 283

 Score = 77.0 bits (188), Expect = 2e-14
 Identities = 40/89 (44%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
 Frame = +2

Query: 110 KGPANKILMAERTSLNILTRACGVATVANRLSSKLKPTWKG-ELTGSRKTTPGFRIVEKY 286
           +G A  ILM ERT+LN+L    G+AT+ NR+  K K   K   +  +RKT P    ++KY
Sbjct: 82  EGDARTILMLERTALNLLMHLSGIATMTNRIVKKAKSVNKNVRVACTRKTLPLLSPLQKY 141

Query: 287 AMYIGGISTHRYDLSSMVMVKDNHVKANG 373
           A+YIGG  THR+ L   V++KDNH+   G
Sbjct: 142 AVYIGGGDTHRFRLDDCVLIKDNHIAIVG 170
>sp|P30819|NADC_PSEAE Nicotinate-nucleotide pyrophosphorylase [carboxylating]
           (Quinolinate phosphoribosyltransferase
           [decarboxylating]) (QAPRTase)
          Length = 282

 Score = 77.0 bits (188), Expect = 2e-14
 Identities = 43/132 (32%), Positives = 70/132 (53%), Gaps = 2/132 (1%)
 Frame = +2

Query: 2   AGLPFAEAVFKYFD--CVVEWKNVEGSFIAKPTVIGMVKGPANKILMAERTSLNILTRAC 175
           AG  + + VF+  D   +V W+  +G  +    ++  +KGPA  +L  ER++LN L    
Sbjct: 54  AGRAWVDEVFRQVDPRVLVTWQVEDGQRVEPNQMLFQLKGPARALLTGERSALNFLQLLS 113

Query: 176 GVATVANRLSSKLKPTWKGELTGSRKTTPGFRIVEKYAMYIGGISTHRYDLSSMVMVKDN 355
           G AT +   +  +  T   +L  +RKT PG R+ +KYA+  GG   HR  L    ++K+N
Sbjct: 114 GTATRSQHYADLVAGT-AVKLLDTRKTLPGLRLAQKYAVTCGGCHNHRIGLYDAFLIKEN 172

Query: 356 HVKANGSIENPL 391
           H+ A G I+  +
Sbjct: 173 HIAACGGIDRAI 184
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,368,287
Number of Sequences: 369166
Number of extensions: 908605
Number of successful extensions: 2207
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2166
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2189
length of database: 68,354,980
effective HSP length: 100
effective length of database: 49,881,480
effective search space used: 2344429560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)