Planaria EST Database


DrC_02641

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_02641
         (602 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P28741|KIF3A_MOUSE  Kinesin-like protein KIF3A (Microtubu...   142   5e-34
sp|P46867|KLP68_DROME  Kinesin-like protein KLP68D                142   5e-34
sp|Q9Y496|KIF3A_HUMAN  Kinesin-like protein KIF3A (Microtubu...   142   5e-34
sp|P46872|KRP85_STRPU  Kinesin-II 85 kDa subunit (KRP-85/95 ...   140   3e-33
sp|O15066|KIF3B_HUMAN  Kinesin-like protein KIF3B (Microtubu...   139   6e-33
sp|Q61771|KIF3B_MOUSE  Kinesin-like protein KIF3B (Microtubu...   139   6e-33
sp|P46873|OSM3_CAEEL  Osmotic avoidance abnormal protein 3 (...   138   9e-33
sp|P46871|KRP95_STRPU  Kinesin-II 95 kDa subunit (KRP-85/95 ...   138   1e-32
sp|P33176|KINH_HUMAN  Kinesin heavy chain (Ubiquitous kinesi...   135   1e-31
sp|Q61768|KINH_MOUSE  Kinesin heavy chain (Ubiquitous kinesi...   135   1e-31
>sp|P28741|KIF3A_MOUSE Kinesin-like protein KIF3A (Microtubule plus end-directed kinesin
           motor 3A)
          Length = 701

 Score =  142 bits (359), Expect = 5e-34
 Identities = 79/165 (47%), Positives = 111/165 (67%), Gaps = 6/165 (3%)
 Frame = +3

Query: 6   VASTKMNAESSRSHLIISIMLTCHLKNSE---NIIRGKISIIDLAGSERVSKSGVQGVGA 176
           V +T MN  SSRSH I +I + C  K  +   ++  GK+ ++DLAGSER +K+G  G   
Sbjct: 208 VGATNMNEHSSRSHAIFTITIECSEKGVDGNMHVRMGKLHLVDLAGSERQAKTGATGQRL 267

Query: 177 QEAMCINLSLSALGDVISALTSGQQ-FIPYRNNKLTLLMQDSIGGNAKTLMIVHVSPTEY 353
           +EA  INLSLS LG+VISAL  G+   +PYRN+KLT L+QDS+GGN+KT+M  ++ P +Y
Sbjct: 268 KEATKINLSLSTLGNVISALVDGKSTHVPYRNSKLTRLLQDSLGGNSKTMMCANIGPADY 327

Query: 354 NYVETINSLTYGARVKLIKNESTKSFDSEEA--PRLMKIIEHLKR 482
           NY ETI++L Y  R K IKN++  + D ++A   +  K IE LK+
Sbjct: 328 NYDETISTLRYANRAKNIKNKARINEDPKDALLRQFQKEIEELKK 372
>sp|P46867|KLP68_DROME Kinesin-like protein KLP68D
          Length = 784

 Score =  142 bits (359), Expect = 5e-34
 Identities = 77/161 (47%), Positives = 106/161 (65%), Gaps = 2/161 (1%)
 Frame = +3

Query: 6   VASTKMNAESSRSHLIISIMLTCHLKNSENIIRGKISIIDLAGSERVSKSGVQGVGAQEA 185
           V  T MN  SSRSH I  I +      +  I  GK+++IDLAGSER SK+G      +EA
Sbjct: 211 VGFTNMNEHSSRSHAIFMIKIEMCDTETNTIKVGKLNLIDLAGSERQSKTGASAERLKEA 270

Query: 186 MCINLSLSALGDVISALTSGQQFIPYRNNKLTLLMQDSIGGNAKTLMIVHVSPTEYNYVE 365
             INL+LS+LG+VISAL      +PYR++KLT L+QDS+GGN+KT+MI ++ P+ YNY E
Sbjct: 271 SKINLALSSLGNVISALAESSPHVPYRDSKLTRLLQDSLGGNSKTIMIANIGPSNYNYNE 330

Query: 366 TINSLTYGARVKLIKNESTKSFDSEEA--PRLMKIIEHLKR 482
           T+ +L YG+R K I+N+  K+ D ++A      + IE LKR
Sbjct: 331 TLTTLRYGSRAKSIQNQPIKNEDPQDAKLKEYQEEIERLKR 371
>sp|Q9Y496|KIF3A_HUMAN Kinesin-like protein KIF3A (Microtubule plus end-directed kinesin
           motor 3A)
          Length = 702

 Score =  142 bits (359), Expect = 5e-34
 Identities = 79/165 (47%), Positives = 111/165 (67%), Gaps = 6/165 (3%)
 Frame = +3

Query: 6   VASTKMNAESSRSHLIISIMLTCHLKNSE---NIIRGKISIIDLAGSERVSKSGVQGVGA 176
           V +T MN  SSRSH I +I + C  K  +   ++  GK+ ++DLAGSER +K+G  G   
Sbjct: 208 VGATNMNEHSSRSHAIFTITIECSEKGIDGNMHVRMGKLHLVDLAGSERQAKTGATGQRL 267

Query: 177 QEAMCINLSLSALGDVISALTSGQQ-FIPYRNNKLTLLMQDSIGGNAKTLMIVHVSPTEY 353
           +EA  INLSLS LG+VISAL  G+   +PYRN+KLT L+QDS+GGN+KT+M  ++ P +Y
Sbjct: 268 KEATKINLSLSTLGNVISALVDGKSTHVPYRNSKLTRLLQDSLGGNSKTMMCANIGPADY 327

Query: 354 NYVETINSLTYGARVKLIKNESTKSFDSEEA--PRLMKIIEHLKR 482
           NY ETI++L Y  R K IKN++  + D ++A   +  K IE LK+
Sbjct: 328 NYDETISTLRYANRAKNIKNKARINEDPKDALLRQFQKEIEELKK 372
>sp|P46872|KRP85_STRPU Kinesin-II 85 kDa subunit (KRP-85/95 85 kDa subunit)
          Length = 699

 Score =  140 bits (352), Expect = 3e-33
 Identities = 81/165 (49%), Positives = 109/165 (66%), Gaps = 6/165 (3%)
 Frame = +3

Query: 6   VASTKMNAESSRSHLIISIMLT---CHLKNSENIIRGKISIIDLAGSERVSKSGVQGVGA 176
           V +T MN  SSRSH I +I L      L   +++  GK+ ++DLAGSER +K+G  G   
Sbjct: 205 VGATNMNESSSRSHAIFTITLERSDMGLDKEQHVRVGKLHMVDLAGSERQTKTGATGQRL 264

Query: 177 QEAMCINLSLSALGDVISALTSGQQ-FIPYRNNKLTLLMQDSIGGNAKTLMIVHVSPTEY 353
           +EA  INLSLS LG+VIS+L  G+   IPYRN+KLT L+QDS+GGNAKT+M  ++ P EY
Sbjct: 265 KEATKINLSLSTLGNVISSLVDGKSTHIPYRNSKLTRLLQDSLGGNAKTVMCANIGPAEY 324

Query: 354 NYVETINSLTYGARVKLIKNESTKSFDSEEA--PRLMKIIEHLKR 482
           NY ETI++L Y  R K IKN++  + D ++A      K IE LK+
Sbjct: 325 NYDETISTLRYANRAKNIKNKAKINEDPKDALLREFQKEIEELKK 369
>sp|O15066|KIF3B_HUMAN Kinesin-like protein KIF3B (Microtubule plus end-directed kinesin
           motor 3B) (HH0048)
          Length = 747

 Score =  139 bits (350), Expect = 6e-33
 Identities = 79/151 (52%), Positives = 104/151 (68%), Gaps = 4/151 (2%)
 Frame = +3

Query: 6   VASTKMNAESSRSHLIISIMLTCHLK--NSENIIR-GKISIIDLAGSERVSKSGVQGVGA 176
           V +T MN  SSRSH I  I + C     + EN IR GK++++DLAGSER +K+G QG   
Sbjct: 203 VGATNMNEHSSRSHAIFVITIECSEVGLDGENHIRVGKLNLVDLAGSERQAKTGAQGERL 262

Query: 177 QEAMCINLSLSALGDVISALTSGQQ-FIPYRNNKLTLLMQDSIGGNAKTLMIVHVSPTEY 353
           +EA  INLSLSALG+VISAL  G+   IPYR++KLT L+QDS+GGNAKT+M+ +V P  Y
Sbjct: 263 KEATKINLSLSALGNVISALVDGKSTHIPYRDSKLTRLLQDSLGGNAKTVMVANVGPASY 322

Query: 354 NYVETINSLTYGARVKLIKNESTKSFDSEEA 446
           N  ET+ +L Y  R K IKN+   + D ++A
Sbjct: 323 NVEETLTTLRYANRAKNIKNKPRVNEDPKDA 353
>sp|Q61771|KIF3B_MOUSE Kinesin-like protein KIF3B (Microtubule plus end-directed kinesin
           motor 3B)
          Length = 747

 Score =  139 bits (350), Expect = 6e-33
 Identities = 79/151 (52%), Positives = 104/151 (68%), Gaps = 4/151 (2%)
 Frame = +3

Query: 6   VASTKMNAESSRSHLIISIMLTCHLK--NSENIIR-GKISIIDLAGSERVSKSGVQGVGA 176
           V +T MN  SSRSH I  I + C     + EN IR GK++++DLAGSER +K+G QG   
Sbjct: 203 VGATNMNEHSSRSHAIFVITIECSEVGLDGENHIRVGKLNLVDLAGSERQAKTGAQGERL 262

Query: 177 QEAMCINLSLSALGDVISALTSGQQ-FIPYRNNKLTLLMQDSIGGNAKTLMIVHVSPTEY 353
           +EA  INLSLSALG+VISAL  G+   IPYR++KLT L+QDS+GGNAKT+M+ +V P  Y
Sbjct: 263 KEATKINLSLSALGNVISALVDGKSTHIPYRDSKLTRLLQDSLGGNAKTVMVANVGPASY 322

Query: 354 NYVETINSLTYGARVKLIKNESTKSFDSEEA 446
           N  ET+ +L Y  R K IKN+   + D ++A
Sbjct: 323 NVEETLTTLRYANRAKNIKNKPRVNEDPKDA 353
>sp|P46873|OSM3_CAEEL Osmotic avoidance abnormal protein 3 (Kinesin-like protein osm-3)
          Length = 699

 Score =  138 bits (348), Expect = 9e-33
 Identities = 77/149 (51%), Positives = 107/149 (71%), Gaps = 1/149 (0%)
 Frame = +3

Query: 3   HVASTKMNAESSRSHLIISIMLTCHLKNSENIIRGKISIIDLAGSERVSKSGVQGVGAQE 182
           HV +T MN +SSRSH I ++ +   +  + +I  GK++++DLAGSER SK+G  G   +E
Sbjct: 193 HVGATLMNKDSSRSHSIFTVYVE-GMTETGSIRMGKLNLVDLAGSERQSKTGATGDRLKE 251

Query: 183 AMCINLSLSALGDVISALTSGQ-QFIPYRNNKLTLLMQDSIGGNAKTLMIVHVSPTEYNY 359
           A  INLSLSALG+VISAL  G+ + IPYR++KLT L+QDS+GGN KT+MI  VSP+  NY
Sbjct: 252 ATKINLSLSALGNVISALVDGKSKHIPYRDSKLTRLLQDSLGGNTKTIMIACVSPSSDNY 311

Query: 360 VETINSLTYGARVKLIKNESTKSFDSEEA 446
            ET+++L Y  R K IKN+ T + D ++A
Sbjct: 312 DETLSTLRYANRAKNIKNKPTINEDPKDA 340
>sp|P46871|KRP95_STRPU Kinesin-II 95 kDa subunit (KRP-85/95 95 kDa subunit)
          Length = 742

 Score =  138 bits (347), Expect = 1e-32
 Identities = 79/151 (52%), Positives = 104/151 (68%), Gaps = 4/151 (2%)
 Frame = +3

Query: 6   VASTKMNAESSRSHLIISIMLTCHLK--NSENIIR-GKISIIDLAGSERVSKSGVQGVGA 176
           V ST MN  SSRSH I  I + C     + EN IR GK++++DLAGSER +K+G  G   
Sbjct: 202 VGSTNMNEHSSRSHAIFIITIECSELGVDGENHIRVGKLNLVDLAGSERQAKTGATGDRL 261

Query: 177 QEAMCINLSLSALGDVISALTSGQQ-FIPYRNNKLTLLMQDSIGGNAKTLMIVHVSPTEY 353
           +EA  INLSLSALG+VISAL  G+   IPYR++KLT L+QDS+GGNAKT+M+ ++ P  Y
Sbjct: 262 KEATKINLSLSALGNVISALVDGKSSHIPYRDSKLTRLLQDSLGGNAKTVMVANMGPASY 321

Query: 354 NYVETINSLTYGARVKLIKNESTKSFDSEEA 446
           N+ ETI +L Y  R K IKN+   + D ++A
Sbjct: 322 NFDETITTLRYANRAKNIKNKPKINEDPKDA 352
>sp|P33176|KINH_HUMAN Kinesin heavy chain (Ubiquitous kinesin heavy chain) (UKHC)
          Length = 963

 Score =  135 bits (339), Expect = 1e-31
 Identities = 68/137 (49%), Positives = 94/137 (68%)
 Frame = +3

Query: 3   HVASTKMNAESSRSHLIISIMLTCHLKNSENIIRGKISIIDLAGSERVSKSGVQGVGAQE 182
           HVA T MN  SSRSH I  I +      +E  + GK+ ++DLAGSE+VSK+G +G    E
Sbjct: 191 HVAVTNMNEHSSRSHSIFLINVKQENTQTEQKLSGKLYLVDLAGSEKVSKTGAEGAVLDE 250

Query: 183 AMCINLSLSALGDVISALTSGQQFIPYRNNKLTLLMQDSIGGNAKTLMIVHVSPTEYNYV 362
           A  IN SLSALG+VISAL  G  ++PYR++K+T ++QDS+GGN +T +++  SP+ YN  
Sbjct: 251 AKNINKSLSALGNVISALAEGSTYVPYRDSKMTRILQDSLGGNCRTTIVICCSPSSYNES 310

Query: 363 ETINSLTYGARVKLIKN 413
           ET ++L +G R K IKN
Sbjct: 311 ETKSTLLFGQRAKTIKN 327
>sp|Q61768|KINH_MOUSE Kinesin heavy chain (Ubiquitous kinesin heavy chain) (UKHC)
          Length = 963

 Score =  135 bits (339), Expect = 1e-31
 Identities = 68/137 (49%), Positives = 94/137 (68%)
 Frame = +3

Query: 3   HVASTKMNAESSRSHLIISIMLTCHLKNSENIIRGKISIIDLAGSERVSKSGVQGVGAQE 182
           HVA T MN  SSRSH I  I +      +E  + GK+ ++DLAGSE+VSK+G +G    E
Sbjct: 191 HVAVTNMNEHSSRSHSIFLINVKQENTQTEQKLSGKLYLVDLAGSEKVSKTGAEGAVLDE 250

Query: 183 AMCINLSLSALGDVISALTSGQQFIPYRNNKLTLLMQDSIGGNAKTLMIVHVSPTEYNYV 362
           A  IN SLSALG+VISAL  G  ++PYR++K+T ++QDS+GGN +T +++  SP+ YN  
Sbjct: 251 AKNINKSLSALGNVISALAEGSTYVPYRDSKMTRILQDSLGGNCRTTIVICCSPSSYNES 310

Query: 363 ETINSLTYGARVKLIKN 413
           ET ++L +G R K IKN
Sbjct: 311 ETKSTLLFGQRAKTIKN 327
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,342,066
Number of Sequences: 369166
Number of extensions: 1074432
Number of successful extensions: 2685
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2490
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2551
length of database: 68,354,980
effective HSP length: 105
effective length of database: 48,957,805
effective search space used: 4650991475
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)