Planaria EST Database


DrC_02632

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_02632
         (898 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9Y673|ALG5_HUMAN  Dolichyl-phosphate beta-glucosyltransf...   172   9e-43
sp|Q9DB25|ALG5_MOUSE  Dolichyl-phosphate beta-glucosyltransf...   171   3e-42
sp|P40350|ALG5_YEAST  Dolichyl-phosphate beta-glucosyltransf...   105   2e-22
sp|Q6D2F0|ARNC_ERWCT  Undecaprenyl-phosphate 4-deoxy-4-forma...    69   2e-11
sp|Q7N3Q6|ARNC_PHOLL  Undecaprenyl-phosphate 4-deoxy-4-forma...    65   3e-10
sp|O60762|DPM1_HUMAN  Dolichol-phosphate mannosyltransferase...    64   4e-10
sp|Q9WU83|DPM1_CRIGR  Dolichol-phosphate mannosyltransferase...    63   1e-09
sp|O70152|DPM1_MOUSE  Dolichol-phosphate mannosyltransferase...    62   2e-09
sp|Q8XDZ5|ARNC_ECO57  Undecaprenyl-phosphate 4-deoxy-4-forma...    62   2e-09
sp|Q8D342|ARNC_WIGBR  Undecaprenyl-phosphate 4-deoxy-4-forma...    62   2e-09
>sp|Q9Y673|ALG5_HUMAN Dolichyl-phosphate beta-glucosyltransferase
           (DolP-glucosyltransferase)
          Length = 324

 Score =  172 bits (437), Expect = 9e-43
 Identities = 90/164 (54%), Positives = 118/164 (71%), Gaps = 1/164 (0%)
 Frame = +3

Query: 33  KVFPRLKDSGTINLSVIIPAYNEETRLPVMIDEALQYLEKC-KTEKSLSYEIIIVDDGSN 209
           +  P + DS T  LSV++P+YNEE RLPVM+DEAL YLEK  K + + +YE+I+VDDGS 
Sbjct: 54  ETLPSIWDSPTKQLSVVVPSYNEEKRLPVMMDEALSYLEKRQKRDPAFTYEVIVVDDGSK 113

Query: 210 DRTTDIALEYSQKYTTNVVRVLTLDKNRGKGGAVRLGMLSARGKELLFADADGATLFXXX 389
           D+T+ +A +Y QKY ++ VRV+TL KNRGKGGA+R+G+ S+RG+++L ADADGAT F   
Sbjct: 114 DQTSKVAFKYCQKYGSDKVRVITLVKNRGKGGAIRMGIFSSRGEKILMADADGATKFPDV 173

Query: 390 XXXXXXXXIQLNRSDCNMALVCGSRAHLEKESIVKRSIFRTILM 521
                     L      MA+ CGSRAHLEKESI +RS FRT+LM
Sbjct: 174 EKLEKGLN-DLQPWPNQMAIACGSRAHLEKESIAQRSYFRTLLM 216

 Score =  135 bits (339), Expect = 2e-31
 Identities = 60/91 (65%), Positives = 73/91 (80%)
 Frame = +2

Query: 521 DTQCGFKLFSRPAARLLFGNLHVERWAFDVDILYLAAHFRIPIGEVCVTWTEKEGSKLVP 700
           DTQCGFKLF+R AA   F +LHVERWAFDV++LY+A  F+IPI E+ V WTE EGSKLVP
Sbjct: 233 DTQCGFKLFTREAASRTFSSLHVERWAFDVELLYIAQFFKIPIAEIAVNWTEIEGSKLVP 292

Query: 701 VFSWLQMAKDILLIRLRYMLGAWKIEPQHKL 793
            +SWLQM KD+L IRLRY+ GAW++E   K+
Sbjct: 293 FWSWLQMGKDLLFIRLRYLTGAWRLEQTRKM 323
>sp|Q9DB25|ALG5_MOUSE Dolichyl-phosphate beta-glucosyltransferase
           (DolP-glucosyltransferase)
          Length = 324

 Score =  171 bits (433), Expect = 3e-42
 Identities = 91/164 (55%), Positives = 118/164 (71%), Gaps = 1/164 (0%)
 Frame = +3

Query: 33  KVFPRLKDSGTINLSVIIPAYNEETRLPVMIDEALQYLEKC-KTEKSLSYEIIIVDDGSN 209
           +  P + DS T  LSV++P+YNEE RLPVM+DEAL YLEK  K + + +YE+I+VDDGS 
Sbjct: 54  EALPSIWDSPTKQLSVVVPSYNEEKRLPVMMDEALNYLEKRQKHDCTFTYEVIVVDDGSE 113

Query: 210 DRTTDIALEYSQKYTTNVVRVLTLDKNRGKGGAVRLGMLSARGKELLFADADGATLFXXX 389
           D+T+ +AL+Y QKY ++ VRV+TL +NRGKGGAVR+G+ S+RG+++L ADADGAT F   
Sbjct: 114 DQTSKVALKYCQKYGSDKVRVITLVRNRGKGGAVRMGVFSSRGEKILMADADGATKFPDV 173

Query: 390 XXXXXXXXIQLNRSDCNMALVCGSRAHLEKESIVKRSIFRTILM 521
                     L      MA+ CGSRAHLEKESI +RS FRT LM
Sbjct: 174 EKLEKGLS-DLQPWPEQMAIACGSRAHLEKESIAQRSYFRTFLM 216

 Score =  127 bits (318), Expect = 5e-29
 Identities = 57/90 (63%), Positives = 70/90 (77%)
 Frame = +2

Query: 521 DTQCGFKLFSRPAARLLFGNLHVERWAFDVDILYLAAHFRIPIGEVCVTWTEKEGSKLVP 700
           DTQCGFKL +R AA   F +LH+ERWAFDV++LY+A   +IPI EV V WTE EGSKLVP
Sbjct: 233 DTQCGFKLLTREAAARTFSSLHIERWAFDVELLYIAQCLQIPIAEVAVNWTEIEGSKLVP 292

Query: 701 VFSWLQMAKDILLIRLRYMLGAWKIEPQHK 790
            +SWLQM KD+L IRLRY+ GAW+++   K
Sbjct: 293 FWSWLQMGKDLLFIRLRYLTGAWRLKQTRK 322
>sp|P40350|ALG5_YEAST Dolichyl-phosphate beta-glucosyltransferase
           (DolP-glucosyltransferase)
          Length = 334

 Score =  105 bits (261), Expect = 2e-22
 Identities = 69/181 (38%), Positives = 100/181 (55%), Gaps = 11/181 (6%)
 Frame = +3

Query: 12  DPNEQIYKVFPRL---KDSGTINLSVIIPAYNEETRLPVMIDEALQYLEKCKTEKSLSYE 182
           +   ++ +  P L   +D   I LSV+IP+YNE  R+ +M+ +A+ +L   K +    +E
Sbjct: 52  EKGHEVSRALPNLNEHQDDEEIFLSVVIPSYNETGRILLMLTDAISFL---KEKYGSRWE 108

Query: 183 IIIVDDGSNDRTTDIALEYSQ---KYTTNVVRVLTLDKNRGKGGAVRLGMLSARGKELLF 353
           I+IVDDGS D TT   L+  +   K      R++   +NRGKGGAVR G L  RGK  LF
Sbjct: 109 IVIVDDGSTDNTTQYCLKICKEQFKLNYEQFRIIKFSQNRGKGGAVRQGFLHIRGKYGLF 168

Query: 354 ADADGATLF-XXXXXXXXXXXIQLNRSDCNM---ALVCGSRAHL-EKESIVKRSIFRTIL 518
           ADADGA+ F            I+ + +D      A+  GSRAH+   E+++KRS+ R  L
Sbjct: 169 ADADGASKFSDVEKLIDAISKIETSSTDLKTTKPAVAIGSRAHMVNTEAVIKRSMIRNCL 228

Query: 519 M 521
           M
Sbjct: 229 M 229

 Score = 88.6 bits (218), Expect = 2e-17
 Identities = 41/84 (48%), Positives = 58/84 (69%)
 Frame = +2

Query: 521 DTQCGFKLFSRPAARLLFGNLHVERWAFDVDILYLAAHFRIPIGEVCVTWTEKEGSKLVP 700
           DTQCGFKLF+R A   +F  LH E W FDV+IL LA   RI I E+ ++W E +GSK+  
Sbjct: 246 DTQCGFKLFNRAAILKIFPYLHTEGWIFDVEILILAIRKRIQIEEIPISWHEVDGSKMAL 305

Query: 701 VFSWLQMAKDILLIRLRYMLGAWK 772
               ++MAKD+++IR+ Y+LG ++
Sbjct: 306 AIDSIKMAKDLVIIRMAYLLGIYR 329
>sp|Q6D2F0|ARNC_ERWCT Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
           (Undecaprenyl-phosphate Ara4FN transferase) (Ara4FN
           transferase)
          Length = 327

 Score = 68.9 bits (167), Expect = 2e-11
 Identities = 39/99 (39%), Positives = 58/99 (58%)
 Frame = +3

Query: 69  NLSVIIPAYNEETRLPVMIDEALQYLEKCKTEKSLSYEIIIVDDGSNDRTTDIALEYSQK 248
           N+SV+IP YNEE  LPV+I+  L    K        +EII+VDDGSNDR+ ++  E +  
Sbjct: 7   NVSVVIPVYNEEESLPVLIERTLAACRKI----GKPWEIILVDDGSNDRSAELLTEAASD 62

Query: 249 YTTNVVRVLTLDKNRGKGGAVRLGMLSARGKELLFADAD 365
              +++ VL L++N G+  A+  G   A G  ++  DAD
Sbjct: 63  PEKHIIAVL-LNRNYGQHSAIMAGFQQAVGDVVITLDAD 100
>sp|Q7N3Q6|ARNC_PHOLL Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
           (Undecaprenyl-phosphate Ara4FN transferase) (Ara4FN
           transferase) (Polymyxin resistance protein pmrF)
          Length = 325

 Score = 65.1 bits (157), Expect = 3e-10
 Identities = 32/98 (32%), Positives = 61/98 (62%)
 Frame = +3

Query: 72  LSVIIPAYNEETRLPVMIDEALQYLEKCKTEKSLSYEIIIVDDGSNDRTTDIALEYSQKY 251
           +SV+IP YNEE  LP++++  L   ++   E    YE+I+VDDGS+D++ +I ++ +++ 
Sbjct: 9   VSVVIPIYNEEESLPLLLERTLAACKQLTQE----YELILVDDGSSDKSAEILIQAAEQP 64

Query: 252 TTNVVRVLTLDKNRGKGGAVRLGMLSARGKELLFADAD 365
             +++ +L L++N G+  A+  G     G  ++  DAD
Sbjct: 65  ENHIIAIL-LNRNYGQHSAIMAGFNQVNGDLIITLDAD 101
>sp|O60762|DPM1_HUMAN Dolichol-phosphate mannosyltransferase (Dolichol-phosphate mannose
           synthase) (Dolichyl-phosphate
           beta-D-mannosyltransferase) (Mannose-P-dolichol
           synthase) (MPD synthase) (DPM synthase)
          Length = 260

 Score = 64.3 bits (155), Expect = 4e-10
 Identities = 36/97 (37%), Positives = 55/97 (56%)
 Frame = +3

Query: 75  SVIIPAYNEETRLPVMIDEALQYLEKCKTEKSLSYEIIIVDDGSNDRTTDIALEYSQKYT 254
           SV++P YNE   LP+++      L K  +E  ++YEIII+DDGS D T D+A +  + Y 
Sbjct: 28  SVLLPTYNERENLPLIV----WLLVKSFSESGINYEIIIIDDGSPDGTRDVAEQLEKIYG 83

Query: 255 TNVVRVLTLDKNRGKGGAVRLGMLSARGKELLFADAD 365
           ++ + +   +K  G G A   GM  A G  ++  DAD
Sbjct: 84  SDRILLRpreKKLGLGTAYIHGMKHATGNYIIIMDAD 120
>sp|Q9WU83|DPM1_CRIGR Dolichol-phosphate mannosyltransferase (Dolichol-phosphate mannose
           synthase) (Dolichyl-phosphate
           beta-D-mannosyltransferase) (Mannose-P-dolichol
           synthase) (MPD synthase) (DPM synthase)
          Length = 266

 Score = 62.8 bits (151), Expect = 1e-09
 Identities = 37/108 (34%), Positives = 59/108 (54%)
 Frame = +3

Query: 42  PRLKDSGTINLSVIIPAYNEETRLPVMIDEALQYLEKCKTEKSLSYEIIIVDDGSNDRTT 221
           P+ + S     SV++P YNE   LP+++      L K  +E S++YEIII+DDGS D T 
Sbjct: 23  PQGRSSRRDKYSVLLPTYNERENLPLIV----WLLVKSFSESSINYEIIIIDDGSPDGTR 78

Query: 222 DIALEYSQKYTTNVVRVLTLDKNRGKGGAVRLGMLSARGKELLFADAD 365
           ++A +  + Y  + + +   +K  G G A   G+  A G  ++  DAD
Sbjct: 79  EVAEQLEKIYGPDRILLRpreKKLGLGTAYIHGIKHATGNYVIIMDAD 126
>sp|O70152|DPM1_MOUSE Dolichol-phosphate mannosyltransferase (Dolichol-phosphate mannose
           synthase) (Dolichyl-phosphate
           beta-D-mannosyltransferase) (Mannose-P-dolichol
           synthase) (MPD synthase) (DPM synthase)
          Length = 260

 Score = 62.4 bits (150), Expect = 2e-09
 Identities = 36/108 (33%), Positives = 60/108 (55%)
 Frame = +3

Query: 42  PRLKDSGTINLSVIIPAYNEETRLPVMIDEALQYLEKCKTEKSLSYEIIIVDDGSNDRTT 221
           P+ + S     SV++P YNE   LP+++      L K  +E +++YEIII+DDGS D T 
Sbjct: 17  PQGRSSRQDKYSVLLPTYNERENLPLIV----WLLVKSFSESAINYEIIIIDDGSPDGTR 72

Query: 222 DIALEYSQKYTTNVVRVLTLDKNRGKGGAVRLGMLSARGKELLFADAD 365
           ++A + ++ Y  + + +   +K  G G A   G+  A G  ++  DAD
Sbjct: 73  EVAEQLAEIYGPDRILLRpreKKLGLGTAYIHGIKHATGNYVIIMDAD 120
>sp|Q8XDZ5|ARNC_ECO57 Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
           (Undecaprenyl-phosphate Ara4FN transferase) (Ara4FN
           transferase)
          Length = 322

 Score = 62.4 bits (150), Expect = 2e-09
 Identities = 35/98 (35%), Positives = 55/98 (56%)
 Frame = +3

Query: 72  LSVIIPAYNEETRLPVMIDEALQYLEKCKTEKSLSYEIIIVDDGSNDRTTDIALEYSQKY 251
           +SV+IP YNE+  LP +I       E    E    YEI+++DDGS+D +  I +E SQ  
Sbjct: 10  VSVVIPVYNEQESLPELIRRTTTACESLGKE----YEILLIDDGSSDNSAHILVEASQAE 65

Query: 252 TTNVVRVLTLDKNRGKGGAVRLGMLSARGKELLFADAD 365
            +++V +L L++N G+  A+  G     G  ++  DAD
Sbjct: 66  NSHIVSIL-LNRNYGQHSAIMAGFSHVTGDLIITLDAD 102
>sp|Q8D342|ARNC_WIGBR Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
           (Undecaprenyl-phosphate Ara4FN transferase) (Ara4FN
           transferase)
          Length = 323

 Score = 62.0 bits (149), Expect = 2e-09
 Identities = 36/98 (36%), Positives = 55/98 (56%)
 Frame = +3

Query: 72  LSVIIPAYNEETRLPVMIDEALQYLEKCKTEKSLSYEIIIVDDGSNDRTTDIALEYSQKY 251
           LS+IIP YNE+  L  +I   +    K K    + YEIII+DDGSND++ +I  + + K 
Sbjct: 7   LSIIIPVYNEQDSLIELIKRTVNTCSKLK----IKYEIIIIDDGSNDKSINILEKEALKQ 62

Query: 252 TTNVVRVLTLDKNRGKGGAVRLGMLSARGKELLFADAD 365
            + +V +  L KN G+  A+  G   + G  ++  DAD
Sbjct: 63  NSKIVAIF-LKKNYGQHSAIMAGFKHSSGDLVITMDAD 99
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 101,610,161
Number of Sequences: 369166
Number of extensions: 2071772
Number of successful extensions: 5573
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5328
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5523
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 9030416440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)