Planaria EST Database


DrC_02624

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_02624
         (218 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9BYT1|CT059_HUMAN  Putative transporter C20orf59               73   2e-13
sp|Q8VCL5|CT059_MOUSE  Putative transporter C20orf59 homolog       69   3e-12
sp|Q9MZD1|S17A5_SHEEP  Sialin (Solute carrier family 17 memb...    37   0.018
sp|Q9NRA2|S17A5_HUMAN  Sialin (Solute carrier family 17 memb...    35   0.053
sp|O00624|NPT3_HUMAN  Sodium-dependent phosphate transport p...    34   0.091
sp|O00476|NPT4_HUMAN  Sodium-dependent phosphate transport p...    33   0.26 
sp|Q8BN82|S17A5_MOUSE  Sialin (Solute carrier family 17 memb...    33   0.26 
sp|P34644|YOQ6_CAEEL  Hypothetical protein ZK512.6 in chromo...    32   0.34 
sp|P39398|YJJL_ECOLI  Inner membrane transport protein yjjL        32   0.59 
sp|P37489|YYBO_BACSU  Hypothetical transport protein yybO          31   0.77 
>sp|Q9BYT1|CT059_HUMAN Putative transporter C20orf59
          Length = 436

 Score = 72.8 bits (177), Expect = 2e-13
 Identities = 29/62 (46%), Positives = 43/62 (69%)
 Frame = +1

Query: 28  LPWKCLLSKSAFWAMLYGHFTHSNCVVILISWLPSYFHDNFPDAKSWVFNVVPYLINIPS 207
           +PW+ L  K A WA +    + +    IL+SWLP++F + FPDAK W+FNVVP+L+ IP+
Sbjct: 230 VPWRRLFRKPAVWAAVVSQLSAACSFFILLSWLPTFFEETFPDAKGWIFNVVPWLVAIPA 289

Query: 208 TL 213
           +L
Sbjct: 290 SL 291
>sp|Q8VCL5|CT059_MOUSE Putative transporter C20orf59 homolog
          Length = 439

 Score = 69.3 bits (168), Expect = 3e-12
 Identities = 27/64 (42%), Positives = 44/64 (68%)
 Frame = +1

Query: 22  SSLPWKCLLSKSAFWAMLYGHFTHSNCVVILISWLPSYFHDNFPDAKSWVFNVVPYLINI 201
           S +PW+ L  K++ WA +      +    IL+SWLP++F + FP++K WVFNVVP+++ I
Sbjct: 231 SKVPWRQLFRKASVWAAICSQLCSACSFFILLSWLPTFFKETFPNSKGWVFNVVPWMLAI 290

Query: 202 PSTL 213
           P++L
Sbjct: 291 PASL 294
>sp|Q9MZD1|S17A5_SHEEP Sialin (Solute carrier family 17 member 5) (Sodium/sialic acid
           cotransporter) (Membrane glycoprotein SP55)
          Length = 495

 Score = 36.6 bits (83), Expect = 0.018
 Identities = 18/65 (27%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
 Frame = +1

Query: 4   SSLQPTSSLPWKCLLSKSAFWAMLYGHFTHSNCVVILISWLPSYFHD--NFPDAKSWVFN 177
           + L    S+PW  +L     WA++  HF+++     L++ LP+Y  +   F   ++   +
Sbjct: 272 NQLSSQKSVPWIPMLKSLPLWAIVVAHFSYNWTFYTLLTLLPTYMKEVLRFNIQENGFLS 331

Query: 178 VVPYL 192
            VPYL
Sbjct: 332 AVPYL 336
>sp|Q9NRA2|S17A5_HUMAN Sialin (Solute carrier family 17 member 5) (Sodium/sialic acid
           cotransporter) (AST) (Membrane glycoprotein HP59)
          Length = 495

 Score = 35.0 bits (79), Expect = 0.053
 Identities = 17/65 (26%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
 Frame = +1

Query: 4   SSLQPTSSLPWKCLLSKSAFWAMLYGHFTHSNCVVILISWLPSYFHD--NFPDAKSWVFN 177
           + L    S+PW  +L     WA++  HF+++     L++ LP+Y  +   F   ++   +
Sbjct: 272 NQLSSQKSVPWVPILKSLPLWAIVVAHFSYNWTFYTLLTLLPTYMKEILRFNVQENGFLS 331

Query: 178 VVPYL 192
            +PYL
Sbjct: 332 SLPYL 336
>sp|O00624|NPT3_HUMAN Sodium-dependent phosphate transport protein 3 (Sodium/phosphate
           cotransporter 3) (Na(+)/PI cotransporter 3) (Solute
           carrier family 18 member 2)
          Length = 436

 Score = 34.3 bits (77), Expect = 0.091
 Identities = 19/71 (26%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
 Frame = +1

Query: 16  PTSSLPWKCLLSKSAFWAMLYGHFTHSNCVVILISWLPSY----FHDNFPDAKSWVFNVV 183
           P  ++P K +++    WA+  G F+H     I++++LP+Y     H N  D  S V + +
Sbjct: 260 PGRAVPIKAMVTCLPLWAIFLGFFSHFWLCTIILTYLPTYISTLLHVNIRD--SGVLSSL 317

Query: 184 PYLINIPSTLV 216
           P++     T++
Sbjct: 318 PFIAAASCTIL 328
>sp|O00476|NPT4_HUMAN Sodium-dependent phosphate transport protein 4 (Sodium/phosphate
           cotransporter 4) (Na(+)/PI cotransporter 4) (Solute
           carrier family 18 member 3)
          Length = 401

 Score = 32.7 bits (73), Expect = 0.26
 Identities = 19/68 (27%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
 Frame = +1

Query: 4   SSLQPTSSLPWKCLLSKSAFWAMLYGHFTHSNCVVILISWLPSY----FHDNFPDAKSWV 171
           SS QP   LP K +L     W++  G F+H   V  ++ ++P+Y    +H N  D  + +
Sbjct: 183 SSKQP---LPIKAMLRSLPIWSICLGCFSHQWLVSTMVVYIPTYISSVYHVNIRD--NGL 237

Query: 172 FNVVPYLI 195
            + +P+++
Sbjct: 238 LSALPFIV 245
>sp|Q8BN82|S17A5_MOUSE Sialin (Solute carrier family 17 member 5) (Sodium/sialic acid
           cotransporter)
          Length = 495

 Score = 32.7 bits (73), Expect = 0.26
 Identities = 15/64 (23%), Positives = 31/64 (48%), Gaps = 2/64 (3%)
 Frame = +1

Query: 4   SSLQPTSSLPWKCLLSKSAFWAMLYGHFTHSNCVVILISWLPSYFHD--NFPDAKSWVFN 177
           + L     +PW  +L     WA++  HF+++     L++ LP+Y  +   F   ++   +
Sbjct: 272 NQLSSQKVVPWGSILKSLPLWAIVVAHFSYNWSFYTLLTLLPTYMKEILRFNVQENGFLS 331

Query: 178 VVPY 189
            +PY
Sbjct: 332 ALPY 335
>sp|P34644|YOQ6_CAEEL Hypothetical protein ZK512.6 in chromosome III
          Length = 576

 Score = 32.3 bits (72), Expect = 0.34
 Identities = 17/68 (25%), Positives = 34/68 (50%), Gaps = 3/68 (4%)
 Frame = +1

Query: 1   ISSLQPT-SSLPWKCLLSKSAFWAMLYGHFTHSNCVVILISWLPSYFHD--NFPDAKSWV 171
           +S+  PT  S+PWK +++    WA++  +F  S    +L+    +Y  +      A S +
Sbjct: 286 VSNTHPTIRSIPWKAIVTSKPVWAIIVANFARSWTFYLLLQNQLTYMKEALGMKIADSGL 345

Query: 172 FNVVPYLI 195
              +P+L+
Sbjct: 346 LAAIPHLV 353
>sp|P39398|YJJL_ECOLI Inner membrane transport protein yjjL
          Length = 453

 Score = 31.6 bits (70), Expect = 0.59
 Identities = 18/69 (26%), Positives = 28/69 (40%), Gaps = 2/69 (2%)
 Frame = +1

Query: 16  PTSSLPWKCLLSKSAFWAMLYGHFTHSNCVVILISWLPSYFHDNFP-DAKS-WVFNVVPY 189
           P S   W+ L      W M+ G    +    + ++WLP Y    +  D KS  +   +P+
Sbjct: 244 PLSFAEWRSLFRNRTMWGMMLGFSGINYTAWLYLAWLPGYLQTAYNLDLKSTGLMAAIPF 303

Query: 190 LINIPSTLV 216
           L      LV
Sbjct: 304 LFGAAGMLV 312
>sp|P37489|YYBO_BACSU Hypothetical transport protein yybO
          Length = 435

 Score = 31.2 bits (69), Expect = 0.77
 Identities = 17/68 (25%), Positives = 32/68 (47%), Gaps = 8/68 (11%)
 Frame = +1

Query: 19  TSSLPWKC------LLSKSAFWAMLYGHFTHSNCVVILISWLPSYFHDNF--PDAKSWVF 174
           T  +P+K       L +    W ++ G   +     +L++WLP++F   +      S +F
Sbjct: 222 TEQIPYKTGPLLKKLFTNRKVWGLMIGFTGYGYTFNLLLTWLPTFFKHTYGMDLMSSGLF 281

Query: 175 NVVPYLIN 198
             VP+LI+
Sbjct: 282 TAVPWLIS 289
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 30,358,887
Number of Sequences: 369166
Number of extensions: 556299
Number of successful extensions: 1350
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1333
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1350
length of database: 68,354,980
effective HSP length: 44
effective length of database: 60,226,640
effective search space used: 1686345920
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)