Planaria EST Database


DrC_02610

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_02610
         (742 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9JJ04|B4GT4_MOUSE  Beta-1,4-galactosyltransferase 4 (Bet...   173   5e-43
sp|Q66HH1|B4GT4_RAT  Beta-1,4-galactosyltransferase 4 (Beta-...   173   5e-43
sp|O60513|B4GT4_HUMAN  Beta-1,4-galactosyltransferase 4 (Bet...   172   1e-42
sp|Q80WN7|B4GT4_CRIGR  Beta-1,4-galactosyltransferase 4 (Bet...   170   4e-42
sp|Q80WN9|B4GT2_CRIGR  Beta-1,4-galactosyltransferase 2 (Bet...   169   5e-42
sp|Q9Z2Y2|B4GT2_MOUSE  Beta-1,4-galactosyltransferase 2 (Bet...   168   2e-41
sp|O60909|B4GT2_HUMAN  Beta-1,4-galactosyltransferase 2 (Bet...   166   5e-41
sp|P15535|B4GT1_MOUSE  Beta-1,4-galactosyltransferase 1 (Bet...   165   1e-40
sp|P15291|B4GT1_HUMAN  Beta-1,4-galactosyltransferase 1 (Bet...   164   3e-40
sp|P08037|B4GT1_BOVIN  Beta-1,4-galactosyltransferase 1 (Bet...   163   4e-40
>sp|Q9JJ04|B4GT4_MOUSE Beta-1,4-galactosyltransferase 4 (Beta-1,4-GalTase 4) (Beta4Gal-T4)
           (b4Gal-T4) (UDP-galactose:beta-N-acetylglucosamine
           beta-1,4-galactosyltransferase 4) (UDP-Gal:beta-GlcNAc
           beta-1,4-galactosyltransferase 4) [Includes:
           N-acetyllactosamine synthase (Nal synthetase);
           Beta-N-acetylglucosaminyl-glycolipid
           beta-1,4-galactosyltransferase ]
          Length = 344

 Score =  173 bits (438), Expect = 5e-43
 Identities = 85/162 (52%), Positives = 106/162 (65%)
 Frame = +3

Query: 12  RFNRAALFNVGYKEALKETSINYDCFIFHDVDLIPTNENNLYKCGSNPLHLSVAIDKFNY 191
           +FNRA L NVGY EALKE   N+DCF+FHDVDL+P N+ NLY CG  P HL V  +   Y
Sbjct: 167 KFNRAKLLNVGYLEALKEE--NWDCFVFHDVDLVPENDFNLYTCGDQPKHLVVGRNSTGY 224

Query: 192 KLPYNSIFGGAVALSKKQFLKVNGFSNIFYGWGGEDDDMSTRLTAEHYSIARYPNLVARY 371
           +L Y+  FGG  ALS++QFLKVNGFSN ++GWGGEDDD+  R+      I+R    V +Y
Sbjct: 225 RLRYSKYFGGVTALSREQFLKVNGFSNNYWGWGGEDDDLRLRVELHKMKISRPKPDVGKY 284

Query: 372 VMIRHNSDSGNPVNDARWKLLKDSKTRYKIDGISTLDYSIQS 497
            MI H  D GN VN  R KLL+     +K DG+S+  Y + S
Sbjct: 285 TMIFHTRDKGNEVNMGRMKLLQQMSRVWKTDGLSSCSYRLLS 326
>sp|Q66HH1|B4GT4_RAT Beta-1,4-galactosyltransferase 4 (Beta-1,4-GalTase 4) (Beta4Gal-T4)
           (b4Gal-T4) (UDP-galactose:beta-N-acetylglucosamine
           beta-1,4-galactosyltransferase 4) (UDP-Gal:beta-GlcNAc
           beta-1,4-galactosyltransferase 4) [Includes:
           N-acetyllactosamine synthase (Nal synthetase);
           Beta-N-acetylglucosaminyl-glycolipid
           beta-1,4-galactosyltransferase ]
          Length = 344

 Score =  173 bits (438), Expect = 5e-43
 Identities = 85/162 (52%), Positives = 106/162 (65%)
 Frame = +3

Query: 12  RFNRAALFNVGYKEALKETSINYDCFIFHDVDLIPTNENNLYKCGSNPLHLSVAIDKFNY 191
           +FNRA L NVGY EALKE   N+DCFIFHDVDL+P N+ NLY CG  P HL V  +   Y
Sbjct: 167 KFNRAKLLNVGYLEALKEE--NWDCFIFHDVDLVPENDFNLYTCGDQPKHLVVGRNSTGY 224

Query: 192 KLPYNSIFGGAVALSKKQFLKVNGFSNIFYGWGGEDDDMSTRLTAEHYSIARYPNLVARY 371
           +L Y+  FGG  ALS++QF KVNGFSN ++GWGGEDDD+  R+      I+R    V +Y
Sbjct: 225 RLRYSKYFGGVTALSREQFFKVNGFSNNYWGWGGEDDDLRLRVELHKMKISRPKPDVGKY 284

Query: 372 VMIRHNSDSGNPVNDARWKLLKDSKTRYKIDGISTLDYSIQS 497
            MI H  D GN VN +R KLL+     +K DG+S+  Y + S
Sbjct: 285 TMIFHTRDKGNEVNGSRMKLLQQMSRVWKTDGLSSCSYRLLS 326
>sp|O60513|B4GT4_HUMAN Beta-1,4-galactosyltransferase 4 (Beta-1,4-GalTase 4) (Beta4Gal-T4)
           (b4Gal-T4) (UDP-galactose:beta-N-acetylglucosamine
           beta-1,4-galactosyltransferase 4) (UDP-Gal:beta-GlcNAc
           beta-1,4-galactosyltransferase 4) [Includes:
           N-acetyllactosamine synthase (Nal synthetase);
           Beta-N-acetylglucosaminyl-glycolipid
           beta-1,4-galactosyltransferase ]
          Length = 344

 Score =  172 bits (435), Expect = 1e-42
 Identities = 84/164 (51%), Positives = 107/164 (65%)
 Frame = +3

Query: 6   GTRFNRAALFNVGYKEALKETSINYDCFIFHDVDLIPTNENNLYKCGSNPLHLSVAIDKF 185
           G +FNRA L NVGY EALKE   N+DCFIFHDVDL+P N+ NLYKC  +P HL V  +  
Sbjct: 165 GKKFNRAKLLNVGYLEALKEE--NWDCFIFHDVDLVPENDFNLYKCEEHPKHLVVGRNST 222

Query: 186 NYKLPYNSIFGGAVALSKKQFLKVNGFSNIFYGWGGEDDDMSTRLTAEHYSIARYPNLVA 365
            Y+L Y+  FGG  ALS++QF KVNGFSN ++GWGGEDDD+  R+  +   I+R    V 
Sbjct: 223 GYRLRYSGYFGGVTALSREQFFKVNGFSNNYWGWGGEDDDLRLRVELQRMKISRPLPEVG 282

Query: 366 RYVMIRHNSDSGNPVNDARWKLLKDSKTRYKIDGISTLDYSIQS 497
           +Y M+ H  D GN VN  R KLL      ++ DG+S+  Y + S
Sbjct: 283 KYTMVFHTRDKGNEVNAERMKLLHQVSRVWRTDGLSSCSYKLVS 326
>sp|Q80WN7|B4GT4_CRIGR Beta-1,4-galactosyltransferase 4 (Beta-1,4-GalTase 4) (Beta4Gal-T4)
           (b4Gal-T4) (UDP-galactose:beta-N-acetylglucosamine
           beta-1,4-galactosyltransferase 4) (UDP-Gal:beta-GlcNAc
           beta-1,4-galactosyltransferase 4) [Includes:
           N-acetyllactosamine synthase (Nal synthetase);
           Beta-N-acetylglucosaminyl-glycolipid
           beta-1,4-galactosyltransferase ]
          Length = 344

 Score =  170 bits (430), Expect = 4e-42
 Identities = 85/162 (52%), Positives = 104/162 (64%)
 Frame = +3

Query: 12  RFNRAALFNVGYKEALKETSINYDCFIFHDVDLIPTNENNLYKCGSNPLHLSVAIDKFNY 191
           +FNRA L NVGY EALKE   N+DCFIFHDVDL+P N+ NLY CG  P HL V  +   Y
Sbjct: 167 KFNRAKLLNVGYLEALKEQ--NWDCFIFHDVDLVPENDFNLYTCGDQPKHLVVGRNSTGY 224

Query: 192 KLPYNSIFGGAVALSKKQFLKVNGFSNIFYGWGGEDDDMSTRLTAEHYSIARYPNLVARY 371
           +L Y+  FGG  ALS++QF KVNGFSN ++GWGGEDDD+  R+      I+R    V +Y
Sbjct: 225 RLRYSKYFGGVTALSREQFFKVNGFSNNYWGWGGEDDDLRLRVELHKMKISRPNPDVGKY 284

Query: 372 VMIRHNSDSGNPVNDARWKLLKDSKTRYKIDGISTLDYSIQS 497
            MI H  D GN VN  R KLL      +K DG+S+  Y + S
Sbjct: 285 TMIFHTRDKGNEVNVDRMKLLHQMSRVWKTDGLSSCSYRLLS 326
>sp|Q80WN9|B4GT2_CRIGR Beta-1,4-galactosyltransferase 2 (Beta-1,4-GalTase 2) (Beta4Gal-T2)
           (b4Gal-T2) (UDP-galactose:beta-N-acetylglucosamine
           beta-1,4-galactosyltransferase 2) (UDP-Gal:beta-GlcNAc
           beta-1,4-galactosyltransferase 2) [Includes: Lactose
           synthase A protein ; N-acetyllactosamine synthase (Nal
           synthetase); Beta-N-acetylglucosaminylglycopeptide
           beta-1,4-galactosyltransferase ;
           Beta-N-acetylglucosaminyl-glycolipid
           beta-1,4-galactosyltransferase ]
          Length = 369

 Score =  169 bits (429), Expect = 5e-42
 Identities = 79/159 (49%), Positives = 108/159 (67%)
 Frame = +3

Query: 15  FNRAALFNVGYKEALKETSINYDCFIFHDVDLIPTNENNLYKCGSNPLHLSVAIDKFNYK 194
           FNRA L NVG+ EALKE +  YDCFIF DVDL+P ++ NLY+CG  P H ++A+DKF ++
Sbjct: 186 FNRAKLLNVGFLEALKEDA-TYDCFIFSDVDLVPMDDRNLYRCGDQPRHFAIAMDKFGFR 244

Query: 195 LPYNSIFGGAVALSKKQFLKVNGFSNIFYGWGGEDDDMSTRLTAEHYSIARYPNLVARYV 374
           LPY S FGG   LSK QFL++NGF N ++GWGGEDDD+  R++     I+R    + RY 
Sbjct: 245 LPYASYFGGVSGLSKAQFLRINGFPNEYWGWGGEDDDIFNRISLTGMKISRPDVRIGRYR 304

Query: 375 MIRHNSDSGNPVNDARWKLLKDSKTRYKIDGISTLDYSI 491
           MI+H+ D  N  N  R+  ++++K   K DGI +L Y +
Sbjct: 305 MIKHDRDKHNEPNPQRFSKIQNTKLSMKWDGIGSLRYRV 343
>sp|Q9Z2Y2|B4GT2_MOUSE Beta-1,4-galactosyltransferase 2 (Beta-1,4-GalTase 2) (Beta4Gal-T2)
           (b4Gal-T2) (UDP-galactose:beta-N-acetylglucosamine
           beta-1,4-galactosyltransferase 2) (UDP-Gal:beta-GlcNAc
           beta-1,4-galactosyltransferase 2) [Includes: Lactose
           synthase A protein ; N-acetyllactosamine synthase (Nal
           synthetase); Beta-N-acetylglucosaminylglycopeptide
           beta-1,4-galactosyltransferase ;
           Beta-N-acetylglucosaminyl-glycolipid
           beta-1,4-galactosyltransferase ]
          Length = 369

 Score =  168 bits (425), Expect = 2e-41
 Identities = 78/159 (49%), Positives = 108/159 (67%)
 Frame = +3

Query: 15  FNRAALFNVGYKEALKETSINYDCFIFHDVDLIPTNENNLYKCGSNPLHLSVAIDKFNYK 194
           FNRA L NVG+ EALKE +  YDCFIF DVDL+P ++ NLY+CG  P H ++A+DKF ++
Sbjct: 186 FNRAKLLNVGFLEALKEDAA-YDCFIFSDVDLVPMDDRNLYRCGDQPRHFAIAMDKFGFR 244

Query: 195 LPYNSIFGGAVALSKKQFLKVNGFSNIFYGWGGEDDDMSTRLTAEHYSIARYPNLVARYV 374
           LPY S FGG   LSK QFL++NGF N ++GWGGEDDD+  R++     I+R    + RY 
Sbjct: 245 LPYASYFGGVSGLSKAQFLRINGFPNEYWGWGGEDDDIFNRISLTGMKISRPDVRIGRYR 304

Query: 375 MIRHNSDSGNPVNDARWKLLKDSKTRYKIDGISTLDYSI 491
           MI+H+ D  N  N  R+  ++++K   K DGI ++ Y +
Sbjct: 305 MIKHDRDKHNEPNPQRFNKIQNTKMSMKWDGIGSVRYRV 343
>sp|O60909|B4GT2_HUMAN Beta-1,4-galactosyltransferase 2 (Beta-1,4-GalTase 2) (Beta4Gal-T2)
           (b4Gal-T2) (UDP-galactose:beta-N-acetylglucosamine
           beta-1,4-galactosyltransferase 2) (UDP-Gal:beta-GlcNAc
           beta-1,4-galactosyltransferase 2) [Includes: Lactose
           synthase A protein ; N-acetyllactosamine synthase (Nal
           synthetase); Beta-N-acetylglucosaminylglycopeptide
           beta-1,4-galactosyltransferase ;
           Beta-N-acetylglucosaminyl-glycolipid
           beta-1,4-galactosyltransferase ]
          Length = 372

 Score =  166 bits (421), Expect = 5e-41
 Identities = 77/159 (48%), Positives = 107/159 (67%)
 Frame = +3

Query: 15  FNRAALFNVGYKEALKETSINYDCFIFHDVDLIPTNENNLYKCGSNPLHLSVAIDKFNYK 194
           FNRA L NVG+ EALKE +  YDCFIF DVDL+P ++ NLY+CG  P H ++A+DKF ++
Sbjct: 189 FNRAKLLNVGFLEALKEDAA-YDCFIFSDVDLVPMDDRNLYRCGDQPRHFAIAMDKFGFR 247

Query: 195 LPYNSIFGGAVALSKKQFLKVNGFSNIFYGWGGEDDDMSTRLTAEHYSIARYPNLVARYV 374
           LPY   FGG   LSK QFL++NGF N ++GWGGEDDD+  R++     I+R    + RY 
Sbjct: 248 LPYAGYFGGVSGLSKAQFLRINGFPNEYWGWGGEDDDIFNRISLTGMKISRPDIRIGRYR 307

Query: 375 MIRHNSDSGNPVNDARWKLLKDSKTRYKIDGISTLDYSI 491
           MI+H+ D  N  N  R+  ++++K   K DGI ++ Y +
Sbjct: 308 MIKHDRDKHNEPNPQRFTKIQNTKLTMKRDGIGSVRYQV 346
>sp|P15535|B4GT1_MOUSE Beta-1,4-galactosyltransferase 1 (Beta-1,4-GalTase 1) (Beta4Gal-T1)
           (b4Gal-T1) (UDP-galactose:beta-N-acetylglucosamine
           beta-1,4-galactosyltransferase 1) (UDP-Gal:beta-GlcNAc
           beta-1,4-galactosyltransferase 1) [Includes: Lactose
           synthase A protein ; N-acetyllactosamine synthase (Nal
           synthetase); Beta-N-acetylglucosaminylglycopeptide
           beta-1,4-galactosyltransferase ;
           Beta-N-acetylglucosaminyl-glycolipid
           beta-1,4-galactosyltransferase ]
          Length = 399

 Score =  165 bits (418), Expect = 1e-40
 Identities = 79/161 (49%), Positives = 109/161 (67%)
 Frame = +3

Query: 9   TRFNRAALFNVGYKEALKETSINYDCFIFHDVDLIPTNENNLYKCGSNPLHLSVAIDKFN 188
           T FNRA L N+G++EALK+   +Y+CF+F DVDLIP ++ N Y+C S P H+SVA+DKF 
Sbjct: 221 TMFNRAKLLNIGFQEALKD--YDYNCFVFSDVDLIPMDDRNAYRCFSQPRHISVAMDKFG 278

Query: 189 YKLPYNSIFGGAVALSKKQFLKVNGFSNIFYGWGGEDDDMSTRLTAEHYSIARYPNLVAR 368
           + LPY   FGG  ALSK+QFL +NGF N ++GWGGEDDD+  RL  +  SI+R   +V R
Sbjct: 279 FSLPYVQYFGGVSALSKQQFLAINGFPNNYWGWGGEDDDIFNRLVHKGMSISRPNAVVGR 338

Query: 369 YVMIRHNSDSGNPVNDARWKLLKDSKTRYKIDGISTLDYSI 491
             MIRH+ D  N  N  R+  +  +K   + DG+++L Y +
Sbjct: 339 CRMIRHSRDKKNEPNPQRFDRIAHTKETMRFDGLNSLTYKV 379
>sp|P15291|B4GT1_HUMAN Beta-1,4-galactosyltransferase 1 (Beta-1,4-GalTase 1) (Beta4Gal-T1)
           (b4Gal-T1) (UDP-galactose:beta-N-acetylglucosamine
           beta-1,4-galactosyltransferase 1) (UDP-Gal:beta-GlcNAc
           beta-1,4-galactosyltransferase 1) [Includes: Lactose
           synthase A protein ; N-acetyllactosamine synthase (Nal
           synthetase); Beta-N-acetylglucosaminylglycopeptide
           beta-1,4-galactosyltransferase ;
           Beta-N-acetylglucosaminyl-glycolipid
           beta-1,4-galactosyltransferase ]
          Length = 397

 Score =  164 bits (414), Expect = 3e-40
 Identities = 81/161 (50%), Positives = 107/161 (66%)
 Frame = +3

Query: 9   TRFNRAALFNVGYKEALKETSINYDCFIFHDVDLIPTNENNLYKCGSNPLHLSVAIDKFN 188
           T FNRA L NVG++EALK+   +Y CF+F DVDLIP N++N Y+C S P H+SVA+DKF 
Sbjct: 219 TIFNRAKLLNVGFQEALKD--YDYTCFVFSDVDLIPMNDHNAYRCFSQPRHISVAMDKFG 276

Query: 189 YKLPYNSIFGGAVALSKKQFLKVNGFSNIFYGWGGEDDDMSTRLTAEHYSIARYPNLVAR 368
           + LPY   FGG  ALSK+QFL +NGF N ++GWGGEDDD+  RL     SI+R   +V R
Sbjct: 277 FSLPYVQYFGGVSALSKQQFLTINGFPNNYWGWGGEDDDIFNRLVFRGMSISRPNAVVGR 336

Query: 369 YVMIRHNSDSGNPVNDARWKLLKDSKTRYKIDGISTLDYSI 491
             MIRH+ D  N  N  R+  +  +K     DG+++L Y +
Sbjct: 337 CRMIRHSRDKKNEPNPQRFDRIAHTKETMLSDGLNSLTYQV 377
>sp|P08037|B4GT1_BOVIN Beta-1,4-galactosyltransferase 1 (Beta-1,4-GalTase 1) (Beta4Gal-T1)
           (b4Gal-T1) (UDP-galactose:beta-N-acetylglucosamine
           beta-1,4-galactosyltransferase 1) (UDP-Gal:beta-GlcNAc
           beta-1,4-galactosyltransferase 1) [Includes: Lactose
           synthase A protein ; N-acetyllactosamine synthase (Nal
           synthetase); Beta-N-acetylglucosaminylglycopeptide
           beta-1,4-galactosyltransferase ;
           Beta-N-acetylglucosaminyl-glycolipid
           beta-1,4-galactosyltransferase ]
          Length = 402

 Score =  163 bits (413), Expect = 4e-40
 Identities = 78/159 (49%), Positives = 107/159 (67%)
 Frame = +3

Query: 15  FNRAALFNVGYKEALKETSINYDCFIFHDVDLIPTNENNLYKCGSNPLHLSVAIDKFNYK 194
           FNRA L NVG+KEALK+   +Y+CF+F DVDLIP N++N Y+C S P H+SVA+DKF + 
Sbjct: 226 FNRAKLLNVGFKEALKD--YDYNCFVFSDVDLIPMNDHNTYRCFSQPRHISVAMDKFGFS 283

Query: 195 LPYNSIFGGAVALSKKQFLKVNGFSNIFYGWGGEDDDMSTRLTAEHYSIARYPNLVARYV 374
           LPY   FGG  ALSK+QFL +NGF N ++GWGGEDDD+  RL     S++R   ++ +  
Sbjct: 284 LPYVQYFGGVSALSKQQFLSINGFPNNYWGWGGEDDDIYNRLAFRGMSVSRPNAVIGKCR 343

Query: 375 MIRHNSDSGNPVNDARWKLLKDSKTRYKIDGISTLDYSI 491
           MIRH+ D  N  N  R+  +  +K     DG+++L Y +
Sbjct: 344 MIRHSRDKKNEPNPQRFDRIAHTKETMLSDGLNSLTYMV 382
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71,550,300
Number of Sequences: 369166
Number of extensions: 1269290
Number of successful extensions: 3186
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3070
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3146
length of database: 68,354,980
effective HSP length: 108
effective length of database: 48,403,600
effective search space used: 6679696800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)