Planaria EST Database


DrC_02607

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_02607
         (414 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q969H0|FBXW7_HUMAN  F-box/WD-repeat protein 7 (F-box and ...   114   6e-26
sp|Q9VZF4|FBXW7_DROME  F-box/WD-repeat protein 7 (F-box and ...   114   6e-26
sp|Q8VBV4|FBXW7_MOUSE  F-box/WD-repeat protein 7 (F-box and ...   112   2e-25
sp|Q93794|SEL10_CAEEL  F-box/WD-repeat protein sel-10 (Suppr...    99   3e-21
sp|O14170|POP2_SCHPO  WD-repeat protein pop2 (Proteolysis fa...    47   2e-05
sp|P53699|CDC4_CANAL  Cell division control protein 4              47   2e-05
sp|Q8YRI1|YY46_ANASP  Hypothetical WD-repeat protein alr3466       45   6e-05
sp|Q8YV57|Y2124_ANASP  Hypothetical WD-repeat protein all2124      43   2e-04
sp|Q17963|YKY4_CAEEL  Hypothetical WD-repeat protein C14B1.4...    43   3e-04
sp|Q9UKB1|FBW1B_HUMAN  F-box/WD-repeat protein 11 (F-box/WD-...    42   4e-04
>sp|Q969H0|FBXW7_HUMAN F-box/WD-repeat protein 7 (F-box and WD-40 domain protein 7) (F-box
           protein FBX30) (hCdc4) (Archipelago homolog) (hAgo)
           (SEL-10)
          Length = 707

 Score =  114 bits (286), Expect = 6e-26
 Identities = 54/108 (50%), Positives = 76/108 (70%)
 Frame = +2

Query: 2   NADNSVRVWLISTGECVLELYGENRHSAALTSVQIVLDRLIVSSAGDGSVKLWNLNDGTF 181
           NAD++V++W I TG+C+  L G N+H +A+T +Q   +  +++S+ DG+VKLW+L  G F
Sbjct: 598 NADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKN-FVITSSDDGTVKLWDLKTGEF 656

Query: 182 IRDIVKLENASRGAVVWRSMNNNNHLVCAVGSRNDTERTKLIFFDFSV 325
           IR++V LE+   G VVWR   +N  LVCAVGSRN TE TKL+  DF V
Sbjct: 657 IRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDV 704

 Score = 41.2 bits (95), Expect = 8e-04
 Identities = 21/62 (33%), Positives = 36/62 (58%)
 Frame = +2

Query: 8   DNSVRVWLISTGECVLELYGENRHSAALTSVQIVLDRLIVSSAGDGSVKLWNLNDGTFIR 187
           DN+++VW   TG+C+  L G   H+  + S Q + D +I+S + D ++K+WN   G  I 
Sbjct: 400 DNTLKVWSAVTGKCLRTLVG---HTGGVWSSQ-MRDNIIISGSTDRTLKVWNAETGECIH 455

Query: 188 DI 193
            +
Sbjct: 456 TL 457

 Score = 38.5 bits (88), Expect = 0.005
 Identities = 16/58 (27%), Positives = 36/58 (62%)
 Frame = +2

Query: 2   NADNSVRVWLISTGECVLELYGENRHSAALTSVQIVLDRLIVSSAGDGSVKLWNLNDG 175
           + D +++VW   TGEC+  LYG   H++ +  + +  ++ +VS + D ++++W++  G
Sbjct: 438 STDRTLKVWNAETGECIHTLYG---HTSTVRCMHL-HEKRVVSGSRDATLRVWDIETG 491

 Score = 36.6 bits (83), Expect = 0.021
 Identities = 23/52 (44%), Positives = 31/52 (59%)
 Frame = +2

Query: 8   DNSVRVWLISTGECVLELYGENRHSAALTSVQIVLDRLIVSSAGDGSVKLWN 163
           D ++RVW I TG+C+  L G   H AA+  VQ    R +VS A D  VK+W+
Sbjct: 480 DATLRVWDIETGQCLHVLMG---HVAAVRCVQYD-GRRVVSGAYDFMVKVWD 527
>sp|Q9VZF4|FBXW7_DROME F-box/WD-repeat protein 7 (F-box and WD-40 domain protein 7)
            (Archipelago protein)
          Length = 1326

 Score =  114 bits (286), Expect = 6e-26
 Identities = 54/109 (49%), Positives = 78/109 (71%)
 Frame = +2

Query: 2    NADNSVRVWLISTGECVLELYGENRHSAALTSVQIVLDRLIVSSAGDGSVKLWNLNDGTF 181
            NAD++V+VW I+TG+C+  L G N+H +A+T +Q    R +V+S+ DG+VKLW++  G F
Sbjct: 1212 NADSTVKVWDITTGQCLQTLSGPNKHHSAVTCLQFN-SRFVVTSSDDGTVKLWDVKTGDF 1270

Query: 182  IRDIVKLENASRGAVVWRSMNNNNHLVCAVGSRNDTERTKLIFFDFSVK 328
            IR++V L++   G VVWR   N+  L+CAVGSRN TE TKL+  DF V+
Sbjct: 1271 IRNLVALDSGGSGGVVWRIRANDTKLICAVGSRNGTEETKLMVLDFDVE 1319

 Score = 36.6 bits (83), Expect = 0.021
 Identities = 17/62 (27%), Positives = 36/62 (58%)
 Frame = +2

Query: 8    DNSVRVWLISTGECVLELYGENRHSAALTSVQIVLDRLIVSSAGDGSVKLWNLNDGTFIR 187
            DN+++VW    G+C+  L G   H+  + S Q +   +I+S + D ++K+W+++ G  + 
Sbjct: 1014 DNTLKVWSAVNGKCLRTLVG---HTGGVWSSQ-MSGNIIISGSTDRTLKVWDMDSGACVH 1069

Query: 188  DI 193
             +
Sbjct: 1070 TL 1071

 Score = 35.4 bits (80), Expect = 0.046
 Identities = 23/52 (44%), Positives = 30/52 (57%)
 Frame = +2

Query: 8    DNSVRVWLISTGECVLELYGENRHSAALTSVQIVLDRLIVSSAGDGSVKLWN 163
            D ++RVW I  G C+  L G   H AA+  VQ    +LIVS A D  VK+W+
Sbjct: 1094 DATLRVWDIEQGSCLHVLVG---HLAAVRCVQYD-GKLIVSGAYDYMVKIWH 1141

 Score = 32.7 bits (73), Expect = 0.30
 Identities = 15/65 (23%), Positives = 38/65 (58%)
 Frame = +2

Query: 2    NADNSVRVWLISTGECVLELYGENRHSAALTSVQIVLDRLIVSSAGDGSVKLWNLNDGTF 181
            + D +++VW + +G CV  L G   H++ +  + +   + +VS + D ++++W++  G+ 
Sbjct: 1052 STDRTLKVWDMDSGACVHTLQG---HTSTVRCMHLHGSK-VVSGSRDATLRVWDIEQGSC 1107

Query: 182  IRDIV 196
            +  +V
Sbjct: 1108 LHVLV 1112
>sp|Q8VBV4|FBXW7_MOUSE F-box/WD-repeat protein 7 (F-box and WD-40 domain protein 7) (F-box
           protein FBW7) (F-box protein Fbxw6) (F-box-WD40 repeat
           protein 6) (SEL-10)
          Length = 629

 Score =  112 bits (281), Expect = 2e-25
 Identities = 53/108 (49%), Positives = 76/108 (70%)
 Frame = +2

Query: 2   NADNSVRVWLISTGECVLELYGENRHSAALTSVQIVLDRLIVSSAGDGSVKLWNLNDGTF 181
           NAD++V++W I TG+C+  L G ++H +A+T +Q   +  +++S+ DG+VKLW+L  G F
Sbjct: 520 NADSTVKIWDIKTGQCLQTLQGPSKHQSAVTCLQFNKN-FVITSSDDGTVKLWDLKTGEF 578

Query: 182 IRDIVKLENASRGAVVWRSMNNNNHLVCAVGSRNDTERTKLIFFDFSV 325
           IR++V LE+   G VVWR   +N  LVCAVGSRN TE TKL+  DF V
Sbjct: 579 IRNLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDV 626

 Score = 41.2 bits (95), Expect = 8e-04
 Identities = 21/62 (33%), Positives = 36/62 (58%)
 Frame = +2

Query: 8   DNSVRVWLISTGECVLELYGENRHSAALTSVQIVLDRLIVSSAGDGSVKLWNLNDGTFIR 187
           DN+++VW   TG+C+  L G   H+  + S Q + D +I+S + D ++K+WN   G  I 
Sbjct: 322 DNTLKVWSAVTGKCLRTLVG---HTGGVWSSQ-MRDNIIISGSTDRTLKVWNAETGECIH 377

Query: 188 DI 193
            +
Sbjct: 378 TL 379

 Score = 38.5 bits (88), Expect = 0.005
 Identities = 16/58 (27%), Positives = 36/58 (62%)
 Frame = +2

Query: 2   NADNSVRVWLISTGECVLELYGENRHSAALTSVQIVLDRLIVSSAGDGSVKLWNLNDG 175
           + D +++VW   TGEC+  LYG   H++ +  + +  ++ +VS + D ++++W++  G
Sbjct: 360 STDRTLKVWNAETGECIHTLYG---HTSTVRCMHL-HEKRVVSGSRDATLRVWDIETG 413

 Score = 36.6 bits (83), Expect = 0.021
 Identities = 23/52 (44%), Positives = 31/52 (59%)
 Frame = +2

Query: 8   DNSVRVWLISTGECVLELYGENRHSAALTSVQIVLDRLIVSSAGDGSVKLWN 163
           D ++RVW I TG+C+  L G   H AA+  VQ    R +VS A D  VK+W+
Sbjct: 402 DATLRVWDIETGQCLHVLMG---HVAAVRCVQYD-GRRVVSGAYDFMVKVWD 449
>sp|Q93794|SEL10_CAEEL F-box/WD-repeat protein sel-10 (Suppressor/enhancer of lin-12)
           (Sel-10 protein)
          Length = 587

 Score = 99.4 bits (246), Expect = 3e-21
 Identities = 49/106 (46%), Positives = 68/106 (64%)
 Frame = +2

Query: 2   NADNSVRVWLISTGECVLELYGENRHSAALTSVQIVLDRLIVSSAGDGSVKLWNLNDGTF 181
           NAD+ VRVW I  G CV  L G   H +A+TS+Q     ++ +S+ DG+VKLW++  G  
Sbjct: 480 NADSHVRVWDIHEGTCVHMLSG---HRSAITSLQWFGRNMVATSSDDGTVKLWDIERGAL 536

Query: 182 IRDIVKLENASRGAVVWRSMNNNNHLVCAVGSRNDTERTKLIFFDF 319
           IRD+V L++   G  +WR  + +  L CAVGSRN+TE TK+I  DF
Sbjct: 537 IRDLVTLDSGGNGGCIWRLCSTSTMLACAVGSRNNTEETKVILLDF 582

 Score = 39.7 bits (91), Expect = 0.002
 Identities = 22/63 (34%), Positives = 36/63 (57%), Gaps = 1/63 (1%)
 Frame = +2

Query: 8   DNSVRVWLISTGECVLELYGENRHSAALTSVQIV-LDRLIVSSAGDGSVKLWNLNDGTFI 184
           DN+++VW I  GE +  L G   H+  + + QI    R IVS + D +VK+W+  DG+ +
Sbjct: 275 DNTLKVWCIDKGEVMYTLVG---HTGGVWTSQISQCGRYIVSGSTDRTVKVWSTVDGSLL 331

Query: 185 RDI 193
             +
Sbjct: 332 HTL 334

 Score = 37.7 bits (86), Expect = 0.009
 Identities = 23/67 (34%), Positives = 35/67 (52%)
 Frame = +2

Query: 8   DNSVRVWLISTGECVLELYGENRHSAALTSVQIVLDRLIVSSAGDGSVKLWNLNDGTFIR 187
           D ++RVW + +G  +  L+G   H AA+  VQ      +VS   D +VK+WN + G  IR
Sbjct: 357 DTTLRVWDVESGRHLATLHG---HHAAVRCVQFD-GTTVVSGGYDFTVKIWNAHTGRCIR 412

Query: 188 DIVKLEN 208
            +    N
Sbjct: 413 TLTGHNN 419
>sp|O14170|POP2_SCHPO WD-repeat protein pop2 (Proteolysis factor sud1)
          Length = 703

 Score = 46.6 bits (109), Expect = 2e-05
 Identities = 23/58 (39%), Positives = 38/58 (65%), Gaps = 1/58 (1%)
 Frame = +2

Query: 8   DNSVRVWLISTGECVLELYGENRHSAALTSVQIVLDR-LIVSSAGDGSVKLWNLNDGT 178
           D+S+R+W +STGEC+  L G   HS  + SV    +R + +S + D S+++W+L+ GT
Sbjct: 526 DSSIRIWRVSTGECLYHLRG---HSLRIYSVLYEPERNICISGSMDKSIRVWDLSTGT 580

 Score = 45.8 bits (107), Expect = 3e-05
 Identities = 24/56 (42%), Positives = 35/56 (62%)
 Frame = +2

Query: 8   DNSVRVWLISTGECVLELYGENRHSAALTSVQIVLDRLIVSSAGDGSVKLWNLNDG 175
           D S+RVW +STG C   L G   H A +T + +  +RLI  SA D ++++W+LN G
Sbjct: 568 DKSIRVWDLSTGTCKYVLEG---HDAFVTLLNVFQNRLISGSA-DSTIRIWDLNTG 619

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 19/62 (30%), Positives = 37/62 (59%)
 Frame = +2

Query: 2   NADNSVRVWLISTGECVLELYGENRHSAALTSVQIVLDRLIVSSAGDGSVKLWNLNDGTF 181
           +AD+++R+W ++TG+ ++ L   + + ++  S     D   + S  DGSVKLW++  G  
Sbjct: 606 SADSTIRIWDLNTGKPLMVLPSNSGYISSFVS-----DEHKIISGNDGSVKLWDVRTGKL 660

Query: 182 IR 187
           +R
Sbjct: 661 LR 662
>sp|P53699|CDC4_CANAL Cell division control protein 4
          Length = 684

 Score = 46.6 bits (109), Expect = 2e-05
 Identities = 37/108 (34%), Positives = 53/108 (49%), Gaps = 2/108 (1%)
 Frame = +2

Query: 5   ADNSVRVWLISTGECVLELYGENRHSAALTSVQIVLDRLIVSSAGDGSVKLWNLNDGTFI 184
           AD ++R+W   TGE   +L G   H AA+T  +   D L V S  +  +KLWN+  GTF 
Sbjct: 581 ADATLRIWDAKTGELRSKLKG---HGAAITCFEH--DGLRVVSGSEKMLKLWNVEKGTFA 635

Query: 185 RDIVKLENASRGAVVWRSMNNNNHLVCAVGS--RNDTERTKLIFFDFS 322
           RD+  L + + G  +W+   +    V AV      D   T +   DFS
Sbjct: 636 RDL--LSDVTGG--IWQVRFDYKRCVAAVQRIINEDEGETFIEILDFS 679

 Score = 35.8 bits (81), Expect = 0.035
 Identities = 17/56 (30%), Positives = 32/56 (57%)
 Frame = +2

Query: 8   DNSVRVWLISTGECVLELYGENRHSAALTSVQIVLDRLIVSSAGDGSVKLWNLNDG 175
           D+++ VW   TGE    L G     A+L  +  ++D ++VS+A D ++++W+   G
Sbjct: 542 DSNINVWNFETGELKKVLVGH----ASLVGLLDLVDDVLVSAAADATLRIWDAKTG 593
>sp|Q8YRI1|YY46_ANASP Hypothetical WD-repeat protein alr3466
          Length = 1526

 Score = 45.1 bits (105), Expect = 6e-05
 Identities = 24/63 (38%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
 Frame = +2

Query: 8    DNSVRVWLISTGECVLELYGENRHSAALTSVQIVLDRLIVSSAGDG-SVKLWNLNDGTFI 184
            D +VR+W IS+GEC+  L+G   H  ++ SV    D LI++S  D  ++KLW++  G  I
Sbjct: 1431 DQTVRLWNISSGECLYTLHG---HINSVRSVAFSSDGLILASGSDDETIKLWDVKTGECI 1487

Query: 185  RDI 193
            + +
Sbjct: 1488 KTL 1490

 Score = 42.7 bits (99), Expect = 3e-04
 Identities = 27/96 (28%), Positives = 50/96 (52%)
 Frame = +2

Query: 2    NADNSVRVWLISTGECVLELYGENRHSAALTSVQIVLDRLIVSSAGDGSVKLWNLNDGTF 181
            + D +VR+W IS+G+C+  L G N    ++  V      L+ S + D +V+LWN++ G  
Sbjct: 1387 SGDQTVRLWSISSGKCLYTLQGHNNWVGSI--VFSPDGTLLASGSDDQTVRLWNISSGEC 1444

Query: 182  IRDIVKLENASRGAVVWRSMNNNNHLVCAVGSRNDT 289
            +  +    N+ R         +++ L+ A GS ++T
Sbjct: 1445 LYTLHGHINSVRSVAF-----SSDGLILASGSDDET 1475

 Score = 40.4 bits (93), Expect = 0.001
 Identities = 21/57 (36%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
 Frame = +2

Query: 8    DNSVRVWLISTGECVLELYGENRHSAALTSVQIVLDRLIVSSAGDGS-VKLWNLNDG 175
            D +VR+W IS+G C+  L G   H++ + SV    D  +++S GD   V+LW+++ G
Sbjct: 1053 DQTVRLWDISSGNCLYTLQG---HTSCVRSVVFSPDGAMLASGGDDQIVRLWDISSG 1106

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 21/57 (36%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
 Frame = +2

Query: 8    DNSVRVWLISTGECVLELYGENRHSAALTSVQIVLD-RLIVSSAGDGSVKLWNLNDG 175
            D +VR+W IS+GEC+    G   H+  + SV    D  ++ S +GD +V+LW+++ G
Sbjct: 1347 DQTVRLWSISSGECLYTFLG---HTNWVGSVIFSPDGAILASGSGDQTVRLWSISSG 1400

 Score = 39.7 bits (91), Expect = 0.002
 Identities = 21/57 (36%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
 Frame = +2

Query: 2    NADNSVRVWLISTGECVLELYGENRHSAALTSVQIVLD-RLIVSSAGDGSVKLWNLN 169
            ++D +VR+W IS+GEC   LY    H+  + SV   LD  ++ + +GD +V+LW+++
Sbjct: 967  SSDQTVRLWDISSGEC---LYIFQGHTGWVYSVAFNLDGSMLATGSGDQTVRLWDIS 1020

 Score = 37.0 bits (84), Expect = 0.016
 Identities = 19/57 (33%), Positives = 37/57 (64%), Gaps = 1/57 (1%)
 Frame = +2

Query: 8    DNSVRVWLISTGECVLELYGENRHSAALTSVQIVLDRLIVSS-AGDGSVKLWNLNDG 175
            D +VR+W IS+G+C+    G   H++ + SV    + L+++S + D +V+LW+++ G
Sbjct: 927  DQTVRLWDISSGQCLKTFKG---HTSRVRSVVFSPNSLMLASGSSDQTVRLWDISSG 980

 Score = 33.9 bits (76), Expect = 0.13
 Identities = 18/57 (31%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
 Frame = +2

Query: 2    NADNSVRVWLISTGECVLELYGENRHSAALTSVQIVLD-RLIVSSAGDGSVKLWNLN 169
            ++D +VR+W IS+ +C+    G   H+  + SV    D  ++ S +GD +V+LW ++
Sbjct: 1261 SSDKTVRLWDISSSKCLHTFQG---HTNWVNSVAFNPDGSMLASGSGDQTVRLWEIS 1314

 Score = 32.7 bits (73), Expect = 0.30
 Identities = 18/57 (31%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
 Frame = +2

Query: 2    NADNSVRVWLISTGECVLELYGENRHSAALTSVQIVLD-RLIVSSAGDGSVKLWNLN 169
            ++D  VR+W IS+ +C+  L G   H+  + +V    D   + S +GD +V+LW+++
Sbjct: 1135 SSDQIVRLWDISSKKCLYTLQG---HTNWVNAVAFSPDGATLASGSGDQTVRLWDIS 1188
>sp|Q8YV57|Y2124_ANASP Hypothetical WD-repeat protein all2124
          Length = 1683

 Score = 43.1 bits (100), Expect = 2e-04
 Identities = 24/93 (25%), Positives = 46/93 (49%), Gaps = 1/93 (1%)
 Frame = +2

Query: 2    NADNSVRVWLISTGECVLELYGENRHSAALTSVQIVLD-RLIVSSAGDGSVKLWNLNDGT 178
            NAD +V++W +  G+ +  L G   H   +  V    D + + S++ D +VKLWN++DG 
Sbjct: 1423 NADKTVKIWRVRDGKALKTLIG---HDNEVNKVNFSPDGKTLASASRDNTVKLWNVSDGK 1479

Query: 179  FIRDIVKLENASRGAVVWRSMNNNNHLVCAVGS 277
            F + +          V W S + +  ++ +  +
Sbjct: 1480 FKKTL----KGHTDEVFWVSFSPDGKIIASASA 1508

 Score = 38.9 bits (89), Expect = 0.004
 Identities = 19/65 (29%), Positives = 41/65 (63%), Gaps = 1/65 (1%)
 Frame = +2

Query: 2    NADNSVRVWLISTGECVLELYGENRHSAALTSVQIVLD-RLIVSSAGDGSVKLWNLNDGT 178
            ++D+S+++W  ++G+ ++ L G   HSA + +V+   D + I + + D +VKLW+  DG 
Sbjct: 1174 SSDHSIKLWDTTSGQLLMTLTG---HSAGVITVRFSPDGQTIAAGSEDKTVKLWHRQDGK 1230

Query: 179  FIRDI 193
             ++ +
Sbjct: 1231 LLKTL 1235

 Score = 37.0 bits (84), Expect = 0.016
 Identities = 29/117 (24%), Positives = 56/117 (47%), Gaps = 21/117 (17%)
 Frame = +2

Query: 8    DNSVRVW---LISTGECVLELYGENRHSAALTSVQIVLDRLIVSSAG-DGSVKLWNLNDG 175
            DN++R+W   LIS     LE+   N   + + +V  + D  I+++AG DG+++LW+  DG
Sbjct: 1343 DNTIRLWQRPLISP----LEVLAGN---SGVYAVSFLHDGSIIATAGADGNIQLWHSQDG 1395

Query: 176  TFIR-----------------DIVKLENASRGAVVWRSMNNNNHLVCAVGSRNDTER 295
            + ++                 D++   NA +   +WR + +   L   +G  N+  +
Sbjct: 1396 SLLKTLPGNKAIYGISFTPQGDLIASANADKTVKIWR-VRDGKALKTLIGHDNEVNK 1451

 Score = 34.7 bits (78), Expect = 0.078
 Identities = 18/55 (32%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
 Frame = +2

Query: 2    NADNSVRVWLISTGECVLELYGENRHSAALTSVQIVLD-RLIVSSAGDGSVKLWN 163
            +AD ++++W I+ G+ V  L G   H+ ++  V    D + I S++ D ++KLWN
Sbjct: 1258 SADKTIKLWRIADGKLVKTLKG---HNDSVWDVNFSSDGKAIASASRDNTIKLWN 1309

 Score = 32.3 bits (72), Expect = 0.39
 Identities = 25/95 (26%), Positives = 47/95 (49%), Gaps = 1/95 (1%)
 Frame = +2

Query: 8    DNSVRVWLISTGECVLELYGENRHSAALTSVQIVLD-RLIVSSAGDGSVKLWNLNDGTFI 184
            D +V++W    G+ +  L G   H   + S+    D + + S++ D ++KLW + DG  +
Sbjct: 1218 DKTVKLWHRQDGKLLKTLNG---HQDWVNSLSFSPDGKTLASASADKTIKLWRIADGKLV 1274

Query: 185  RDIVKLENASRGAVVWRSMNNNNHLVCAVGSRNDT 289
            + + K  N S    VW    +++    A  SR++T
Sbjct: 1275 KTL-KGHNDS----VWDVNFSSDGKAIASASRDNT 1304

 Score = 32.0 bits (71), Expect = 0.51
 Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
 Frame = +2

Query: 71   NRHSAALTSVQIVLDRLIVSSAG-DGSVKLWNLNDGTFIRDI 193
            N H  A+ SV    D   ++S G D ++KLW  +DGT ++ I
Sbjct: 1110 NGHEDAVYSVSFSPDGQTIASGGSDKTIKLWQTSDGTLLKTI 1151

 Score = 30.8 bits (68), Expect = 1.1
 Identities = 23/96 (23%), Positives = 44/96 (45%), Gaps = 1/96 (1%)
 Frame = +2

Query: 5    ADNSVRVWLISTGECVLELYGENRHSAALTSVQIVLD-RLIVSSAGDGSVKLWNLNDGTF 181
            +D ++++W  S G  +  + G   H   + +V    D + + S++ D S+KLW+   G  
Sbjct: 1133 SDKTIKLWQTSDGTLLKTITG---HEQTVNNVYFSPDGKNLASASSDHSIKLWDTTSGQL 1189

Query: 182  IRDIVKLENASRGAVVWRSMNNNNHLVCAVGSRNDT 289
               ++ L   S G +  R   +   +  A GS + T
Sbjct: 1190 ---LMTLTGHSAGVITVRFSPDGQTI--AAGSEDKT 1220

 Score = 30.8 bits (68), Expect = 1.1
 Identities = 18/59 (30%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
 Frame = +2

Query: 2    NADNSVRVWLISTGECVLELYGENRHSAALTSVQIVLD-RLIVSSAGDGSVKLWNLNDG 175
            +AD ++R+W   +G  +  L     H+  + SV    D  ++ S++ D +VKLW  +DG
Sbjct: 1507 SADKTIRLWDSFSGNLIKSLPA---HNDLVYSVNFNPDGSMLASTSADKTVKLWRSHDG 1562

 Score = 30.0 bits (66), Expect = 1.9
 Identities = 17/68 (25%), Positives = 32/68 (47%)
 Frame = +2

Query: 5    ADNSVRVWLISTGECVLELYGENRHSAALTSVQIVLDRLIVSSAGDGSVKLWNLNDGTFI 184
            AD ++++W    G  +  L G         + Q     LI S+  D +VK+W + DG  +
Sbjct: 1383 ADGNIQLWHSQDGSLLKTLPGNKAIYGISFTPQ---GDLIASANADKTVKIWRVRDGKAL 1439

Query: 185  RDIVKLEN 208
            + ++  +N
Sbjct: 1440 KTLIGHDN 1447
>sp|Q17963|YKY4_CAEEL Hypothetical WD-repeat protein C14B1.4 in chromosome III
          Length = 376

 Score = 42.7 bits (99), Expect = 3e-04
 Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
 Frame = +2

Query: 8   DNSVRVWLISTGECVLELYGENRHSAALTSVQIVLD-RLIVSSAGDGSVKLWNLNDGTFI 184
           D SVR+W + TG C+  L     HS  +++V    D  LI S + DG V++W+  +G  I
Sbjct: 192 DESVRIWDVKTGMCIKTL---PAHSDPVSAVSFNRDGSLIASGSYDGLVRIWDTANGQCI 248

Query: 185 RDIVKLEN 208
           + +V  EN
Sbjct: 249 KTLVDDEN 256

 Score = 32.7 bits (73), Expect = 0.30
 Identities = 17/68 (25%), Positives = 32/68 (47%)
 Frame = +2

Query: 8   DNSVRVWLISTGECVLELYGENRHSAALTSVQIVLDRLIVSSAGDGSVKLWNLNDGTFIR 187
           D  VR+W  + G+C+  L  +     A         + I++S  D ++KLW+ + G  ++
Sbjct: 234 DGLVRIWDTANGQCIKTLVDDENPPVAFVKFS-PNGKYILASNLDSTLKLWDFSKGKTLK 292

Query: 188 DIVKLENA 211
                EN+
Sbjct: 293 QYTGHENS 300
>sp|Q9UKB1|FBW1B_HUMAN F-box/WD-repeat protein 11 (F-box/WD-repeat protein 1B) (F-box and
           WD-repeats protein beta-TrCP2)
          Length = 542

 Score = 42.4 bits (98), Expect = 4e-04
 Identities = 22/62 (35%), Positives = 34/62 (54%)
 Frame = +2

Query: 2   NADNSVRVWLISTGECVLELYGENRHSAALTSVQIVLDRLIVSSAGDGSVKLWNLNDGTF 181
           + D +++VW  ST E V  L G  R  A L       DRL+VS + D +++LW++  G  
Sbjct: 380 SGDRTIKVWSTSTCEFVRTLNGHKRGIACLQ----YRDRLVVSGSSDNTIRLWDIECGAC 435

Query: 182 IR 187
           +R
Sbjct: 436 LR 437

 Score = 39.3 bits (90), Expect = 0.003
 Identities = 18/63 (28%), Positives = 40/63 (63%)
 Frame = +2

Query: 8   DNSVRVWLISTGECVLELYGENRHSAALTSVQIVLDRLIVSSAGDGSVKLWNLNDGTFIR 187
           DNS+++W  ++ EC+  L G   H+ ++  +Q   +R+IV+ + D +V++W++N G  + 
Sbjct: 259 DNSIKIWDKTSLECLKVLTG---HTGSVLCLQYD-ERVIVTGSSDSTVRVWDVNTGEVLN 314

Query: 188 DIV 196
            ++
Sbjct: 315 TLI 317

 Score = 37.0 bits (84), Expect = 0.016
 Identities = 19/55 (34%), Positives = 33/55 (60%)
 Frame = +2

Query: 2   NADNSVRVWLISTGECVLELYGENRHSAALTSVQIVLDRLIVSSAGDGSVKLWNL 166
           ++DN++R+W I  G C+  L G   H   +  ++   ++ IVS A DG +K+W+L
Sbjct: 420 SSDNTIRLWDIECGACLRVLEG---HEELVRCIRFD-NKRIVSGAYDGKIKVWDL 470

 Score = 32.3 bits (72), Expect = 0.39
 Identities = 18/62 (29%), Positives = 34/62 (54%)
 Frame = +2

Query: 8   DNSVRVWLISTGECVLELYGENRHSAALTSVQIVLDRLIVSSAGDGSVKLWNLNDGTFIR 187
           D S+ VW +++   +        H AA+  V    D+ IVS++GD ++K+W+ +   F+R
Sbjct: 339 DRSIAVWDMASATDITLRRVLVGHRAAVNVVDFD-DKYIVSASGDRTIKVWSTSTCEFVR 397

Query: 188 DI 193
            +
Sbjct: 398 TL 399

 Score = 31.6 bits (70), Expect = 0.66
 Identities = 18/61 (29%), Positives = 37/61 (60%)
 Frame = +2

Query: 2   NADNSVRVWLISTGECVLELYGENRHSAALTSVQIVLDRLIVSSAGDGSVKLWNLNDGTF 181
           ++D++VRVW ++TGE +  L     H+ A+  ++   + L+V+ + D S+ +W++   T 
Sbjct: 297 SSDSTVRVWDVNTGEVLNTLI---HHNEAVLHLRF-SNGLMVTCSKDRSIAVWDMASATD 352

Query: 182 I 184
           I
Sbjct: 353 I 353
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 47,026,144
Number of Sequences: 369166
Number of extensions: 852434
Number of successful extensions: 2803
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2273
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2707
length of database: 68,354,980
effective HSP length: 99
effective length of database: 50,066,215
effective search space used: 1902516170
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)