Planaria EST Database


DrC_02590

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_02590
         (589 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9LTM6|C71BH_ARATH  Cytochrome P450 71B17                       31   2.0  
sp|O75795|UDB17_HUMAN  UDP-glucuronosyltransferase 2B17 prec...    30   5.8  
sp|Q08388|PEMT_RAT  Phosphatidylethanolamine N-methyltransfe...    29   9.9  
sp|P14548|CYB_LEITA  Cytochrome b                                  29   9.9  
>sp|Q9LTM6|C71BH_ARATH Cytochrome P450 71B17
          Length = 502

 Score = 31.2 bits (69), Expect = 2.0
 Identities = 22/72 (30%), Positives = 31/72 (43%)
 Frame = -2

Query: 435 KEFSFTPYKENIMHKN*KKLIQRFKELRKEYATNILCNGIRSRQCIYIDET*CNFWTQKL 256
           K+ +FTPY E             +KE R+     + C+  + +  IYI E  CNF  +KL
Sbjct: 111 KDLNFTPYGEE------------WKERRRFLVGELFCSK-KLQSFIYIKEVECNFLVKKL 157

Query: 255 KGRAARGQPAYL 220
              A    P  L
Sbjct: 158 SESAVDQSPVDL 169
>sp|O75795|UDB17_HUMAN UDP-glucuronosyltransferase 2B17 precursor (UDPGT)
           (C19-steroid-specific UDP-glucuronosyltransferase)
          Length = 530

 Score = 29.6 bits (65), Expect = 5.8
 Identities = 19/56 (33%), Positives = 31/56 (55%)
 Frame = -3

Query: 260 N*KAELHEVNQRICKSQLRGPNISILMAITKHGPVHLEVHQTSATQPMYQQFFMQV 93
           N K  L E+ QR  +  +   + SIL+  +K   + LEV+ TS T+   + FFM++
Sbjct: 38  NMKTILEELVQRGHEVIVLTSSASILVNASKSSAIKLEVYPTSLTKNDLEDFFMKM 93
>sp|Q08388|PEMT_RAT Phosphatidylethanolamine N-methyltransferase (PEAMT) (PEMT)
          Length = 199

 Score = 28.9 bits (63), Expect = 9.9
 Identities = 11/25 (44%), Positives = 15/25 (60%)
 Frame = +1

Query: 157 TGPCFVMAIKIEIFGPLSWDLQIRW 231
           T P FV A+   +F PL W++  RW
Sbjct: 11  TEPSFVAAVLTIVFNPLFWNVVARW 35
>sp|P14548|CYB_LEITA Cytochrome b
          Length = 371

 Score = 28.9 bits (63), Expect = 9.9
 Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
 Frame = +3

Query: 285 FRRYICTAWTEFHYIIYLWRILFGAP*TSELISFNFYA*YFLYMA*MK-ILYLINFNKYF 461
           F  +ICT W   +++++LW    G    S  I F     + LY+   K I+ +I F+ + 
Sbjct: 55  FSCFICTNW---YFVLFLWDFDLGFVIRSTHICFTSLLFFLLYVHIFKCIVLIILFDTHI 111

Query: 462 LV 467
           LV
Sbjct: 112 LV 113
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,003,890
Number of Sequences: 369166
Number of extensions: 1317486
Number of successful extensions: 2703
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2659
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2703
length of database: 68,354,980
effective HSP length: 105
effective length of database: 48,957,805
effective search space used: 4406202450
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)