Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_022_K14
(589 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9LTM6|C71BH_ARATH Cytochrome P450 71B17 31 2.0
sp|O75795|UDB17_HUMAN UDP-glucuronosyltransferase 2B17 prec... 30 5.8
sp|Q08388|PEMT_RAT Phosphatidylethanolamine N-methyltransfe... 29 9.9
sp|P14548|CYB_LEITA Cytochrome b 29 9.9
>sp|Q9LTM6|C71BH_ARATH Cytochrome P450 71B17
Length = 502
Score = 31.2 bits (69), Expect = 2.0
Identities = 22/72 (30%), Positives = 31/72 (43%)
Frame = -2
Query: 435 KEFSFTPYKENIMHKN*KKLIQRFKELRKEYATNILCNGIRSRQCIYIDET*CNFWTQKL 256
K+ +FTPY E +KE R+ + C+ + + IYI E CNF +KL
Sbjct: 111 KDLNFTPYGEE------------WKERRRFLVGELFCSK-KLQSFIYIKEVECNFLVKKL 157
Query: 255 KGRAARGQPAYL 220
A P L
Sbjct: 158 SESAVDQSPVDL 169
>sp|O75795|UDB17_HUMAN UDP-glucuronosyltransferase 2B17 precursor (UDPGT)
(C19-steroid-specific UDP-glucuronosyltransferase)
Length = 530
Score = 29.6 bits (65), Expect = 5.8
Identities = 19/56 (33%), Positives = 31/56 (55%)
Frame = -3
Query: 260 N*KAELHEVNQRICKSQLRGPNISILMAITKHGPVHLEVHQTSATQPMYQQFFMQV 93
N K L E+ QR + + + SIL+ +K + LEV+ TS T+ + FFM++
Sbjct: 38 NMKTILEELVQRGHEVIVLTSSASILVNASKSSAIKLEVYPTSLTKNDLEDFFMKM 93
>sp|Q08388|PEMT_RAT Phosphatidylethanolamine N-methyltransferase (PEAMT) (PEMT)
Length = 199
Score = 28.9 bits (63), Expect = 9.9
Identities = 11/25 (44%), Positives = 15/25 (60%)
Frame = +1
Query: 157 TGPCFVMAIKIEIFGPLSWDLQIRW 231
T P FV A+ +F PL W++ RW
Sbjct: 11 TEPSFVAAVLTIVFNPLFWNVVARW 35
>sp|P14548|CYB_LEITA Cytochrome b
Length = 371
Score = 28.9 bits (63), Expect = 9.9
Identities = 19/62 (30%), Positives = 31/62 (50%), Gaps = 1/62 (1%)
Frame = +3
Query: 285 FRRYICTAWTEFHYIIYLWRILFGAP*TSELISFNFYA*YFLYMA*MK-ILYLINFNKYF 461
F +ICT W +++++LW G S I F + LY+ K I+ +I F+ +
Sbjct: 55 FSCFICTNW---YFVLFLWDFDLGFVIRSTHICFTSLLFFLLYVHIFKCIVLIILFDTHI 111
Query: 462 LV 467
LV
Sbjct: 112 LV 113
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,003,890
Number of Sequences: 369166
Number of extensions: 1317486
Number of successful extensions: 2703
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2659
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2703
length of database: 68,354,980
effective HSP length: 105
effective length of database: 48,957,805
effective search space used: 4406202450
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)