Planaria EST Database


DrC_02524

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_02524
         (619 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P49902|5NTC_HUMAN  Cytosolic purine 5'-nucleotidase (5'-n...   166   6e-41
sp|P13828|MSP1_PLAYO  Merozoite surface protein 1 precursor ...    35   0.20 
sp|Q96NH3|CF170_HUMAN  Protein C6orf170                            31   2.2  
sp|P57335|FLHA_BUCAI  Flagellar biosynthesis protein flhA          30   3.8  
sp|Q93109|EQT5_ACTEQ  Equinatoxin-5 precursor (Equinatoxin V...    30   3.8  
sp|P25298|RNA14_YEAST  mRNA 3'-end processing protein RNA14        30   5.0  
sp|P36094|SPC42_YEAST  Spindle pole body component SPC42           29   8.5  
sp|Q13438|OS9_HUMAN  Protein OS-9 precursor                        29   8.5  
sp|Q4QJM6|GLND_HAEI8  [Protein-PII] uridylyltransferase (PII...    29   8.5  
sp|P46419|GSTM1_DERPT  Glutathione S-transferase (GST class-...    29   8.5  
>sp|P49902|5NTC_HUMAN Cytosolic purine 5'-nucleotidase (5'-nucleotidase cytosolic II)
          Length = 561

 Score =  166 bits (419), Expect = 6e-41
 Identities = 83/192 (43%), Positives = 124/192 (64%), Gaps = 1/192 (0%)
 Frame = +3

Query: 24  RMIEIGYPKEIKNFTYDPTFPIRGLWIDKKFGNLLKMDNYGNVLMAFHGLTKMSNSEILA 203
           R++ IGYP+E+ +F YD TFP RGL  D  +GNLLK+D YGN+L+  HG   +   E   
Sbjct: 76  RLVSIGYPQELLSFAYDSTFPTRGLVFDTLYGNLLKVDAYGNLLVCAHGFNFIRGPETRE 135

Query: 204 KYPNKFV-KFEQPRIMVTNTLYNLPETYLIAAAIDYFESTSDCVKDDSGFCLKNNVTIMY 380
           +YPNKF+ + +  R  + NTL+NLPETYL+A  +D+F +       ++GF    ++ + Y
Sbjct: 136 QYPNKFIQRDDTERFYILNTLFNLPETYLLACLVDFFTNCPRYTSCETGF-KDGDLFMSY 194

Query: 381 STIIEDIRDSMDSVHGGKEMSETILQNLEKYVERTPKLAEMLTHLKSNGAKVFLLTNSDY 560
            ++ +D+RD++D VH    + E  ++NLEKYV +  KL  +L+ +K  G KVFL TNSDY
Sbjct: 195 RSMFQDVRDAVDWVHYKGSLKEKTVENLEKYVVKDGKLPLLLSRMKEVG-KVFLATNSDY 253

Query: 561 NYTEKICQYILN 596
            YT+KI  Y+ +
Sbjct: 254 KYTDKIMTYLFD 265
>sp|P13828|MSP1_PLAYO Merozoite surface protein 1 precursor (Merozoite surface antigens)
            (PMMSA) (230 kDa) (PY230)
          Length = 1772

 Score = 34.7 bits (78), Expect = 0.20
 Identities = 17/57 (29%), Positives = 32/57 (56%), Gaps = 7/57 (12%)
 Frame = +3

Query: 375  MYSTII-------EDIRDSMDSVHGGKEMSETILQNLEKYVERTPKLAEMLTHLKSN 524
            +Y T+I       E++++ +D+    K   E + +NLEKY++   KL E + H ++N
Sbjct: 1561 LYETVIGQAEEYSEELQNRLDNYKNEKAEFEILTKNLEKYIQIDEKLDEFVEHAENN 1617
>sp|Q96NH3|CF170_HUMAN Protein C6orf170
          Length = 1247

 Score = 31.2 bits (69), Expect = 2.2
 Identities = 17/51 (33%), Positives = 25/51 (49%)
 Frame = -3

Query: 386  C*IHYCHIILQAETTIVFDTITSRFKIINCCSNQICFW*II*CISNHNTWL 234
            C  HY  ++L+AE  +VF    S F +     +QIC   I  C  N+  W+
Sbjct: 1116 CSTHYIEMLLKAELPLVF----SAFHMSGFAPSQICLQWITQCFWNYLDWI 1162
>sp|P57335|FLHA_BUCAI Flagellar biosynthesis protein flhA
          Length = 696

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 11/25 (44%), Positives = 16/25 (64%)
 Frame = +3

Query: 69  YDPTFPIRGLWIDKKFGNLLKMDNY 143
           Y+PTF + G WID++F N  +   Y
Sbjct: 458 YEPTFGLSGYWIDEEFKNKAQKKGY 482
>sp|Q93109|EQT5_ACTEQ Equinatoxin-5 precursor (Equinatoxin V) (EqtV) (EqT-V)
          Length = 214

 Score = 30.4 bits (67), Expect = 3.8
 Identities = 19/65 (29%), Positives = 35/65 (53%), Gaps = 5/65 (7%)
 Frame = -1

Query: 400 MSSMIVEYIIVTLFFKQKPLS---SLTQSLVDSK*SIAAAIRYVSGK--LYNVLVTIIRG 236
           MS +I+ +I+VT+      LS   S+ +   D K S+A A   + G    +NVL T+++ 
Sbjct: 1   MSRLIIVFIVVTMICAATALSSKKSINEDEKDEKRSVAVAGAVIEGATLTFNVLQTVLKA 60

Query: 235 CSNLT 221
             +++
Sbjct: 61  LGDIS 65
>sp|P25298|RNA14_YEAST mRNA 3'-end processing protein RNA14
          Length = 677

 Score = 30.0 bits (66), Expect = 5.0
 Identities = 26/118 (22%), Positives = 50/118 (42%), Gaps = 2/118 (1%)
 Frame = +3

Query: 135 DNYGNVLMAFHGLTKMSNSEILAKYPNKFVKFEQPRIMVTNTLYNLPETYLIAAAI--DY 308
           DN  N+L  F  +  +   E  AK    + +F       T   Y+   T  +   +  D 
Sbjct: 37  DNPTNILSYFQLIQYLETQESYAKVREVYEQFHN-----TFPFYSPAWTLQLKGELARDE 91

Query: 309 FESTSDCVKDDSGFCLKNNVTIMYSTIIEDIRDSMDSVHGGKEMSETILQNLEKYVER 482
           FE+    +       L+NN   ++ST ++ IR   + + GG+E    I++  +  +++
Sbjct: 92  FETVEKILAQCLSGKLENNDLSLWSTYLDYIRRKNNLITGGQEARAVIVKAFQLVMQK 149
>sp|P36094|SPC42_YEAST Spindle pole body component SPC42
          Length = 363

 Score = 29.3 bits (64), Expect = 8.5
 Identities = 13/40 (32%), Positives = 25/40 (62%)
 Frame = +3

Query: 399 IRDSMDSVHGGKEMSETILQNLEKYVERTPKLAEMLTHLK 518
           +R+  + +   K+++ET+   LEKYV+ T KL +   +L+
Sbjct: 76  LREKQNEIFELKKIAETLRSKLEKYVDITKKLEDQNLNLQ 115
>sp|Q13438|OS9_HUMAN Protein OS-9 precursor
          Length = 667

 Score = 29.3 bits (64), Expect = 8.5
 Identities = 16/35 (45%), Positives = 20/35 (57%)
 Frame = +2

Query: 398 HSRLYGFGSRRKRNVRNYFAEFREIC*ENTEISGN 502
           HS+ YG GS+   N R   AE R +C E   ISG+
Sbjct: 171 HSQTYGNGSKCDLNGRpreAEVRFLCDEGAGISGD 205
>sp|Q4QJM6|GLND_HAEI8 [Protein-PII] uridylyltransferase (PII uridylyl-transferase)
           (Uridylyl-removing enzyme) (UTase)
          Length = 863

 Score = 29.3 bits (64), Expect = 8.5
 Identities = 15/48 (31%), Positives = 25/48 (52%)
 Frame = -3

Query: 437 FFSSVNRIHRVSNVFNDC*IHYCHIILQAETTIVFDTITSRFKIINCC 294
           FF +++RI  +SN+      HY   +L +    V D +   F++IN C
Sbjct: 295 FFQALHRISLISNLLIQ---HYRENVLPSNQDTVIDQLDDDFQLINQC 339
>sp|P46419|GSTM1_DERPT Glutathione S-transferase (GST class-mu) (Major allergen Der p 8)
           (P dp 15)
          Length = 219

 Score = 29.3 bits (64), Expect = 8.5
 Identities = 24/96 (25%), Positives = 40/96 (41%), Gaps = 9/96 (9%)
 Frame = +3

Query: 303 DYFESTSDCVK------DDSGFCLKNNVTIMYSTIIE---DIRDSMDSVHGGKEMSETIL 455
           DY +S  DC+K       +  F    N++ +   + E    ++  +  V G  E      
Sbjct: 127 DYLKSLPDCLKLMSKFVGEHAFIAGANISYVDFNLYEYLCHVKVMVPEVFGQFE------ 180

Query: 456 QNLEKYVERTPKLAEMLTHLKSNGAKVFLLTNSDYN 563
            NL++YVER   L  +  ++K    K F    S +N
Sbjct: 181 -NLKRYVERMESLPRVSDYIKKQQPKTFNAPTSKWN 215
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 67,068,602
Number of Sequences: 369166
Number of extensions: 1287403
Number of successful extensions: 3683
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3582
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3679
length of database: 68,354,980
effective HSP length: 105
effective length of database: 48,957,805
effective search space used: 4895780500
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)