Planaria EST Database


DrC_02512

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_02512
         (561 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q66S03|NATTE_THANI  Nattectin precursor                         44   3e-04
sp|P98110|LYAM2_PIG  E-selectin precursor (Endothelial leuko...    44   4e-04
sp|P27113|LYAM2_RABIT  E-selectin precursor (Endothelial leu...    42   0.001
sp|P22897|MANR1_HUMAN  Macrophage mannose receptor precursor...    40   0.003
sp|P33730|LYAM2_CANFA  E-selectin precursor (Endothelial leu...    40   0.003
sp|P16581|LYAM2_HUMAN  E-selectin precursor (Endothelial leu...    40   0.004
sp|P98105|LYAM2_RAT  E-selectin precursor (Endothelial leuko...    40   0.004
sp|P81397|RHCA_AGKRH  Rhodocetin alpha subunit                     39   0.007
sp|Q95LG1|LYAM2_HORSE  E-selectin precursor (Endothelial leu...    39   0.011
sp|P49260|PLA2R_RABIT  180 kDa secretory phospholipase A2 re...    38   0.015
>sp|Q66S03|NATTE_THANI Nattectin precursor
          Length = 159

 Score = 43.9 bits (102), Expect = 3e-04
 Identities = 39/138 (28%), Positives = 56/138 (40%), Gaps = 2/138 (1%)
 Frame = +1

Query: 4   GDKMFAFVHGDIDARMNFTDAEEFCSNFSLHRNNSDSHLASIQNQTEVNLIQNWILNL-- 177
           G + F F  G +D    +  AE  C            +LASI N+ E N I + I  L  
Sbjct: 39  GSRCFTFHRGSMD----WASAEAACIR-------KGGNLASIHNRREQNFITHLIHKLSG 87

Query: 178 EKKSFWIGGEIICSMNALLDRMFLLHWISNDKVEFTNFKVPNYNVKNMKVTEKRCVSVDH 357
           E +  WIGG      +A+ + M    W  +D  +F N+K       +  V  + C   + 
Sbjct: 88  ENRRTWIGGN-----DAVKEGM----WFWSDGSKF-NYKGWKKGQPDKHVPAEHCAETNF 137

Query: 358 KNGMWGVHHCSEKKFFLC 411
           K   W    C  K+ FLC
Sbjct: 138 KGAFWNNALCKVKRSFLC 155
>sp|P98110|LYAM2_PIG E-selectin precursor (Endothelial leukocyte adhesion molecule 1)
           (ELAM-1) (Leukocyte-endothelial cell adhesion molecule
           2) (LECAM2)
          Length = 484

 Score = 43.5 bits (101), Expect = 4e-04
 Identities = 38/130 (29%), Positives = 51/130 (39%), Gaps = 7/130 (5%)
 Frame = +1

Query: 49  MNFTDAEEFCSNFSLHRNNSDSHLASIQNQTEVNLIQNWILNLEKKSFWIGGEIICSMNA 228
           M F DA  +C           +HL +IQN  E+  + N   N     +WIG   I  +N 
Sbjct: 32  MTFDDASAYCQQ-------RYTHLVAIQNHAEIEYL-NSTFNYSASYYWIG---IRKING 80

Query: 229 LLDRMFLLHWISNDKV---EFTNFKVPNYNVKNMKVTEKRCVSV----DHKNGMWGVHHC 387
                    WI   K    E TN+        N K + + CV +    D  +G W    C
Sbjct: 81  TWT------WIGTKKALTPEATNWAPGE---PNNKQSNEDCVEIYIKRDKDSGKWNDERC 131

Query: 388 SEKKFFLCLT 417
           S+KK  LC T
Sbjct: 132 SKKKLALCYT 141
>sp|P27113|LYAM2_RABIT E-selectin precursor (Endothelial leukocyte adhesion molecule 1)
           (ELAM-1) (Leukocyte-endothelial cell adhesion molecule
           2) (LECAM2)
          Length = 551

 Score = 41.6 bits (96), Expect = 0.001
 Identities = 35/127 (27%), Positives = 53/127 (41%), Gaps = 4/127 (3%)
 Frame = +1

Query: 49  MNFTDAEEFCSNFSLHRNNSDSHLASIQNQTEVNLIQNWILNLEKKSFWIGGEIICSMNA 228
           M + +A  +C         + +HL +IQN+ E++ + N IL+     +WIG   I  +N 
Sbjct: 33  MTYDEASAYCQQ-------NYTHLVAIQNKEEIDYL-NSILDYSPSYYWIG---IRKVNN 81

Query: 229 LLDRMFLLHWISNDKVEFTNFKVPNYNVKNMKVTEKRCVSVDHKN----GMWGVHHCSEK 396
           +        W+   K      K       N K   + CV +  K     GMW    CS+K
Sbjct: 82  VWI------WVGTHKPLTEGAKNWAPGEPNNKQNNEDCVEIYIKRPKDTGMWNDERCSKK 135

Query: 397 KFFLCLT 417
           K  LC T
Sbjct: 136 KLALCYT 142
>sp|P22897|MANR1_HUMAN Macrophage mannose receptor precursor (MMR) (CD206 antigen)
          Length = 1456

 Score = 40.4 bits (93), Expect = 0.003
 Identities = 28/131 (21%), Positives = 56/131 (42%)
 Frame = +1

Query: 40   DARMNFTDAEEFCSNFSLHRNNSDSHLASIQNQTEVNLIQNWILNLEKKSFWIGGEIICS 219
            D +  F+  +E   N       +   L SIQ+++E   +  ++   + +S +  G +I  
Sbjct: 809  DYQYYFSKEKETMDNARAFCKRNFGDLVSIQSESEKKFLWKYVNRNDAQSAYFIGLLIS- 867

Query: 220  MNALLDRMFLLHWISNDKVEFTNFKVPNYNVKNMKVTEKRCVSVDHKNGMWGVHHCSEKK 399
                LD+ F   W+   KV++ ++     N  N    ++ CV++   +G W   +C    
Sbjct: 868  ----LDKKFA--WMDGSKVDYVSWATGEPNFAN---EDENCVTMYSNSGFWNDINCGYPN 918

Query: 400  FFLCLTKNQLV 432
             F+C   N  +
Sbjct: 919  AFICQRHNSSI 929

 Score = 39.7 bits (91), Expect = 0.005
 Identities = 28/101 (27%), Positives = 47/101 (46%), Gaps = 1/101 (0%)
 Frame = +1

Query: 112  SHLASIQNQTEVNLIQNWILNLEKKS-FWIGGEIICSMNALLDRMFLLHWISNDKVEFTN 288
            S L SI++  E + +   +  L+ K+ FWIG      +   ++  +L  WI+N  V F N
Sbjct: 1268 SSLVSIESAAESSFLSYRVEPLKSKTNFWIG------LFRNVEGTWL--WINNSPVSFVN 1319

Query: 289  FKVPNYNVKNMKVTEKRCVSVDHKNGMWGVHHCSEKKFFLC 411
                 +N  +       CV++   +G W   HCS  K ++C
Sbjct: 1320 -----WNTGDPSGERNDCVALHASSGFWSNIHCSSYKGYIC 1355

 Score = 37.4 bits (85), Expect = 0.026
 Identities = 28/121 (23%), Positives = 53/121 (43%), Gaps = 2/121 (1%)
 Frame = +1

Query: 55  FTDAEEFCSNFSLHRNNSDSHLASIQNQTEVNLIQNWILNLEKKSFWIGGEIICSMNALL 234
           F +A + C       NN +++L +I+++ E   + +++    +K FW G   I +     
Sbjct: 525 FAEANQTC-------NNENAYLTTIEDRYEQAFLTSFVGLRPEKYFWTGLSDIQTKGT-- 575

Query: 235 DRMFLLHWISNDKVEFTNFKVPNYNVKNMKVTEKRCVSV--DHKNGMWGVHHCSEKKFFL 408
                  W   ++V FT++        +M   +  CV++      G+W V  C EK  F+
Sbjct: 576 -----FQWTIEEEVRFTHWN------SDMPGRKPGCVAMRTGIAGGLWDVLKCDEKAKFV 624

Query: 409 C 411
           C
Sbjct: 625 C 625

 Score = 33.5 bits (75), Expect = 0.37
 Identities = 29/123 (23%), Positives = 50/123 (40%), Gaps = 6/123 (4%)
 Frame = +1

Query: 79   SNFSLHRNNSDSHLASIQNQTEVNLIQNWILNLEKKSFWIGGEI------ICSMNALLDR 240
            S++SL R     H A    +   +LI + +        W+  E       I   + L D 
Sbjct: 1105 SSYSLMRQKFQWHEAETYCKLHNSLIASILDPYSNAFAWLQMETSNERVWIALNSNLTDN 1164

Query: 241  MFLLHWISNDKVEFTNFKVPNYNVKNMKVTEKRCVSVDHKNGMWGVHHCSEKKFFLCLTK 420
             +   W    +V +TN+      +K+       CV +D  +G W   HC+E  +FLC   
Sbjct: 1165 QYT--WTDKWRVRYTNWAADEPKLKSA------CVYLD-LDGYWKTAHCNESFYFLCKRS 1215

Query: 421  NQL 429
            +++
Sbjct: 1216 DEI 1218
>sp|P33730|LYAM2_CANFA E-selectin precursor (Endothelial leukocyte adhesion molecule 1)
           (ELAM-1) (Leukocyte-endothelial cell adhesion molecule
           2) (LECAM2)
          Length = 611

 Score = 40.4 bits (93), Expect = 0.003
 Identities = 34/127 (26%), Positives = 49/127 (38%), Gaps = 4/127 (3%)
 Frame = +1

Query: 49  MNFTDAEEFCSNFSLHRNNSDSHLASIQNQTEVNLIQNWILNLEKKSFWIGGEIICSMNA 228
           M F +A  +C           +HL +IQNQ E+  + N +       +WIG   I  +N 
Sbjct: 32  MTFDEASTYCQQ-------RYTHLVAIQNQEEIKYL-NSMFTYTPTYYWIG---IRKVNK 80

Query: 229 LLDRMFLLHWISNDKVEFTNFKVPNYNVKNMKVTEKRCVSV----DHKNGMWGVHHCSEK 396
                    WI   K+     K       N K  ++ CV +    D  +G W    C +K
Sbjct: 81  KWT------WIGTQKLLTEEAKNWAPGEPNNKQNDEDCVEIYIKRDKDSGKWNDERCDKK 134

Query: 397 KFFLCLT 417
           K  LC T
Sbjct: 135 KLALCYT 141
>sp|P16581|LYAM2_HUMAN E-selectin precursor (Endothelial leukocyte adhesion molecule 1)
           (ELAM-1) (Leukocyte-endothelial cell adhesion molecule
           2) (LECAM2) (CD62E antigen)
          Length = 610

 Score = 40.0 bits (92), Expect = 0.004
 Identities = 32/127 (25%), Positives = 51/127 (40%), Gaps = 4/127 (3%)
 Frame = +1

Query: 49  MNFTDAEEFCSNFSLHRNNSDSHLASIQNQTEVNLIQNWILNLEKKSFWIGGEIICSMNA 228
           M + +A  +C           +HL +IQN+ E+  + N IL+     +WIG   + ++  
Sbjct: 31  MTYDEASAYCQQ-------RYTHLVAIQNKEEIEYL-NSILSYSPSYYWIGIRKVNNVWV 82

Query: 229 LLDRMFLLHWISNDKVEFTNFKVPNYNVKNMKVTEKRCVSVDHKN----GMWGVHHCSEK 396
                    W+   K      K       N +  ++ CV +  K     GMW    CS+K
Sbjct: 83  ---------WVGTQKPLTEEAKNWAPGEPNNRQKDEDCVEIYIKREKDVGMWNDERCSKK 133

Query: 397 KFFLCLT 417
           K  LC T
Sbjct: 134 KLALCYT 140
>sp|P98105|LYAM2_RAT E-selectin precursor (Endothelial leukocyte adhesion molecule 1)
           (ELAM-1) (Leukocyte-endothelial cell adhesion molecule
           2) (LECAM2)
          Length = 549

 Score = 40.0 bits (92), Expect = 0.004
 Identities = 35/140 (25%), Positives = 53/140 (37%), Gaps = 4/140 (2%)
 Frame = +1

Query: 10  KMFAFVHGDIDARMNFTDAEEFCSNFSLHRNNSDSHLASIQNQTEVNLIQNWILNLEKKS 189
           K  A+ +      M + +A  +C           +HL +IQN+ E+N + N  L      
Sbjct: 18  KSIAWYYNASSELMTYDEASAYCQR-------DYTHLVAIQNKEEINYL-NSTLRYSPSY 69

Query: 190 FWIGGEIICSMNALLDRMFLLHWISNDKVEFTNFKVPNYNVKNMKVTEKRCVSV----DH 357
           +WIG   I  +N +        W+   K      K       N K   + CV +      
Sbjct: 70  YWIG---IRKVNNVWI------WVGTQKPLTEEAKNWAPGEPNNKQRNEDCVEIYIQRPK 120

Query: 358 KNGMWGVHHCSEKKFFLCLT 417
            +GMW    C +KK  LC T
Sbjct: 121 DSGMWNDERCDKKKLALCYT 140
>sp|P81397|RHCA_AGKRH Rhodocetin alpha subunit
          Length = 133

 Score = 39.3 bits (90), Expect = 0.007
 Identities = 30/127 (23%), Positives = 53/127 (41%), Gaps = 5/127 (3%)
 Frame = +1

Query: 46  RMNFTDAEEFCSNFSLHRNNSDSHLASIQNQTEVNLIQNWILN-LEKKSF--WIGGEIIC 216
           +  + +AE FC+         ++HL S++N+ E   +   + N  E K +  WIG +I  
Sbjct: 20  KKTWEEAERFCTE-----QEKEAHLVSMENRLEAVFVDMVMENNFENKIYRSWIGLKIEN 74

Query: 217 SMNALLDRMFLLHWISNDKVEFTNFKVPNYNVKNMKVTEKRCVSVDHKNGM--WGVHHCS 390
                  +   L W     + + N   P           ++C  +DH++G+  W    C 
Sbjct: 75  K-----GQRSNLEWSDGSSISYENLYEPYM---------EKCFLMDHQSGLPKWHTADCE 120

Query: 391 EKKFFLC 411
           EK  F+C
Sbjct: 121 EKNVFMC 127
>sp|Q95LG1|LYAM2_HORSE E-selectin precursor (Endothelial leukocyte adhesion molecule 1)
           (ELAM-1) (Leukocyte-endothelial cell adhesion molecule
           2) (LECAM2)
          Length = 610

 Score = 38.5 bits (88), Expect = 0.011
 Identities = 36/127 (28%), Positives = 50/127 (39%), Gaps = 4/127 (3%)
 Frame = +1

Query: 49  MNFTDAEEFCSNFSLHRNNSDSHLASIQNQTEVNLIQNWILNLEKKSFWIGGEIICSMNA 228
           M F +A  +C           +HL +IQNQ E+  + N I N     +WIG      +  
Sbjct: 31  MTFDEASAYCQQ-------RYTHLVAIQNQEEIKYL-NSIFNHSPSYYWIG------IRK 76

Query: 229 LLDRMFLLHWISNDKVEFTNFKVPNYNVKNMKVTEKRCVSVDHKN----GMWGVHHCSEK 396
           + D+     WI   K      K       N K  E  CV +  K     G W   +C++K
Sbjct: 77  VNDKWV---WIGTQKPLTEEAKNWAPGEPNNKQNED-CVEIYIKRYKDAGKWNDENCNKK 132

Query: 397 KFFLCLT 417
           K  LC T
Sbjct: 133 KLALCYT 139
>sp|P49260|PLA2R_RABIT 180 kDa secretory phospholipase A2 receptor precursor (PLA2-R)
          Length = 1458

 Score = 38.1 bits (87), Expect = 0.015
 Identities = 33/127 (25%), Positives = 50/127 (39%), Gaps = 1/127 (0%)
 Frame = +1

Query: 67  EEFCSNFSLHRN-NSDSHLASIQNQTEVNLIQNWILNLEKKSFWIGGEIICSMNALLDRM 243
           EE   N +LH   +S+S L  I +  EV  +   + N      WIG     S N      
Sbjct: 393 EEKTWNEALHSCLSSNSTLIDIGSLAEVEFLVTLLGNENASETWIG----LSSNTF---P 445

Query: 244 FLLHWISNDKVEFTNFKVPNYNVKNMKVTEKRCVSVDHKNGMWGVHHCSEKKFFLCLTKN 423
               W +   V FTN+      +   +   + CVS +   G W V  C E  F++C    
Sbjct: 446 VSFEWSNGSSVIFTNWHTLEPQIFPNR--SQLCVSAEQSEGHWKVTDCEETHFYVCKKPG 503

Query: 424 QLVIEKE 444
            ++ + E
Sbjct: 504 HVLSDAE 510

 Score = 32.3 bits (72), Expect = 0.82
 Identities = 19/71 (26%), Positives = 29/71 (40%)
 Frame = +1

Query: 250  LHWISNDKVEFTNFKVPNYNVKNMKVTEKRCVSVDHKNGMWGVHHCSEKKFFLCLTKNQL 429
            L W     V + N+       ++M    +RC  +    G+W    CS     +C  K   
Sbjct: 884  LRWRDGTPVIYQNWD--KERDRSMNNQSQRCAFISSITGLWDREECSVSMPSICKRKTFW 941

Query: 430  VIEKEFTAPEK 462
            VIEKE   P++
Sbjct: 942  VIEKEKDTPKQ 952

 Score = 28.9 bits (63), Expect = 9.1
 Identities = 26/132 (19%), Positives = 57/132 (43%), Gaps = 1/132 (0%)
 Frame = +1

Query: 52   NFTDAEEFCSNFSLHRNNSDSHLASIQNQTEVNLIQNWILNLEKKSFWIGGEI-ICSMNA 228
            +F  A EFC           S+L +I+++ E +        L ++ F  G  + +  +NA
Sbjct: 1270 SFEAAHEFCKK-------EGSNLLTIKDEAENSF-------LLEEPFAFGASVQMVWLNA 1315

Query: 229  LLDRMFLLHWISNDKVEFTNFKVPNYNVKNMKVTEKRCVSVDHKNGMWGVHHCSEKKFFL 408
              D    + W+     + +N+ +   ++ + +    +C+++    G+W +  C +   F+
Sbjct: 1316 QFDNE-TVKWLDGTPADQSNWGIRKPDMAHFE--PHQCLALRIPEGVWQLSPCQKNMGFI 1372

Query: 409  CLTKNQLVIEKE 444
            C  K  +   KE
Sbjct: 1373 CKMKADIHTVKE 1384
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,111,677
Number of Sequences: 369166
Number of extensions: 1003093
Number of successful extensions: 2732
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2649
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2720
length of database: 68,354,980
effective HSP length: 104
effective length of database: 49,142,540
effective search space used: 4029688280
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)