Planaria EST Database


DrC_02502

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_02502
         (443 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P37236|FREQ_DROME  Frequenin-1 (d-FRQ)                          58   8e-09
sp|Q6FLU4|CANB_CANGA  Calcineurin B subunit (Protein phospha...    53   3e-07
sp|Q757B7|CANB_ASHGO  Calcineurin B subunit (Protein phospha...    53   3e-07
sp|Q874T7|CANB_KLULA  Calcineurin B subunit (Protein phospha...    52   8e-07
sp|P25296|CANB_YEAST  Calcineurin B subunit (Protein phospha...    50   2e-06
sp|Q8LAS7|CNBL2_ARATH  Calcineurin B-like protein 2 (SOS3-li...    49   4e-06
sp|P37235|HPCL1_HUMAN  Hippocalcin-like protein 1 (Visinin-l...    48   1e-05
sp|Q9JM59|KCIP2_RAT  Kv channel-interacting protein 2 (KChIP...    48   1e-05
sp|P62749|HPCL1_RAT  Hippocalcin-like protein 1 (Visinin-lik...    48   1e-05
sp|Q8LEM7|CNBL3_ARATH  Calcineurin B-like protein 3 (SOS3-li...    48   1e-05
>sp|P37236|FREQ_DROME Frequenin-1 (d-FRQ)
          Length = 187

 Score = 58.2 bits (139), Expect = 8e-09
 Identities = 29/72 (40%), Positives = 44/72 (61%)
 Frame = +3

Query: 3   EIKFAFTVYDLNSDGLISREEMFQLLKPTLVRAYDQPTEEDPDEGTKDLVDMTFKKFDVD 182
           ++++AF +YD+++DG I+REEM+ ++         QP  ED +   K  VD  F + D +
Sbjct: 100 KLQWAFRLYDVDNDGYITREEMYNIVDAIYQMVGQQPQSEDENTPQK-RVDKIFDQMDKN 158

Query: 183 HDGKLTRENFEE 218
           HDGKLT E F E
Sbjct: 159 HDGKLTLEEFRE 170

 Score = 35.4 bits (80), Expect = 0.057
 Identities = 25/75 (33%), Positives = 34/75 (45%), Gaps = 3/75 (4%)
 Frame = +3

Query: 9   KFA---FTVYDLNSDGLISREEMFQLLKPTLVRAYDQPTEEDPDEGTKDLVDMTFKKFDV 179
           KFA   F V+D N+DG I  EE  + L  T     D+  +              F+ +DV
Sbjct: 63  KFASLVFRVFDENNDGSIEFEEFIRALSVTSKGNLDEKLQ------------WAFRLYDV 110

Query: 180 DHDGKLTRENFEEAV 224
           D+DG +TRE     V
Sbjct: 111 DNDGYITREEMYNIV 125
>sp|Q6FLU4|CANB_CANGA Calcineurin B subunit (Protein phosphatase 2B regulatory subunit)
           (Calcineurin regulatory subunit)
          Length = 175

 Score = 52.8 bits (125), Expect = 3e-07
 Identities = 28/74 (37%), Positives = 45/74 (60%)
 Frame = +3

Query: 3   EIKFAFTVYDLNSDGLISREEMFQLLKPTLVRAYDQPTEEDPDEGTKDLVDMTFKKFDVD 182
           ++KFAF +YD++ DGLIS  E+F +LK  +    D       D+  + +VD T  + D+D
Sbjct: 94  KLKFAFKIYDIDKDGLISNGELFIVLKIMVGSNLD-------DKQLQQIVDRTIMENDLD 146

Query: 183 HDGKLTRENFEEAV 224
            DG+L+ E F+ A+
Sbjct: 147 GDGQLSFEEFKSAI 160
>sp|Q757B7|CANB_ASHGO Calcineurin B subunit (Protein phosphatase 2B regulatory subunit)
           (Calcineurin regulatory subunit)
          Length = 175

 Score = 52.8 bits (125), Expect = 3e-07
 Identities = 29/74 (39%), Positives = 44/74 (59%)
 Frame = +3

Query: 3   EIKFAFTVYDLNSDGLISREEMFQLLKPTLVRAYDQPTEEDPDEGTKDLVDMTFKKFDVD 182
           +++FAF +YD++ DG IS  E+F +LK  +    +       DE  + +VD T  + DVD
Sbjct: 94  KLRFAFKIYDIDKDGYISNGELFIVLKIMVGNNLE-------DEQLQQVVDRTIMENDVD 146

Query: 183 HDGKLTRENFEEAV 224
            DGKL+ E F+ AV
Sbjct: 147 GDGKLSFEEFKSAV 160
>sp|Q874T7|CANB_KLULA Calcineurin B subunit (Protein phosphatase 2B regulatory subunit)
           (Calcineurin regulatory subunit)
          Length = 175

 Score = 51.6 bits (122), Expect = 8e-07
 Identities = 28/73 (38%), Positives = 44/73 (60%)
 Frame = +3

Query: 3   EIKFAFTVYDLNSDGLISREEMFQLLKPTLVRAYDQPTEEDPDEGTKDLVDMTFKKFDVD 182
           +++FAF +YD++ DG IS  E+F +LK  +    +       DE  + +VD T  + DVD
Sbjct: 94  KLRFAFRIYDIDKDGYISNGELFIVLKIMVGTNLE-------DEQLQQIVDRTIMENDVD 146

Query: 183 HDGKLTRENFEEA 221
            DGKL+ E F++A
Sbjct: 147 GDGKLSFEEFKKA 159
>sp|P25296|CANB_YEAST Calcineurin B subunit (Protein phosphatase 2B regulatory subunit)
           (Calcineurin regulatory subunit)
          Length = 175

 Score = 50.4 bits (119), Expect = 2e-06
 Identities = 27/74 (36%), Positives = 43/74 (58%)
 Frame = +3

Query: 3   EIKFAFTVYDLNSDGLISREEMFQLLKPTLVRAYDQPTEEDPDEGTKDLVDMTFKKFDVD 182
           +++FAF +YD++ DG IS  E+F +LK  +    D       DE  + +VD T  + D D
Sbjct: 94  KLRFAFKIYDIDKDGFISNGELFIVLKIMVGSNLD-------DEQLQQIVDRTIVENDSD 146

Query: 183 HDGKLTRENFEEAV 224
            DG+L+ E F+ A+
Sbjct: 147 GDGRLSFEEFKNAI 160
>sp|Q8LAS7|CNBL2_ARATH Calcineurin B-like protein 2 (SOS3-like calcium-binding protein 1)
          Length = 226

 Score = 49.3 bits (116), Expect = 4e-06
 Identities = 25/74 (33%), Positives = 41/74 (55%)
 Frame = +3

Query: 3   EIKFAFTVYDLNSDGLISREEMFQLLKPTLVRAYDQPTEEDPDEGTKDLVDMTFKKFDVD 182
           +I F+F +YDL   G I R+E+ Q++  TL  +         D   +D++D TF++ D  
Sbjct: 123 KIHFSFQLYDLKQQGFIERQEVKQMVVATLAES----GMNLKDTVIEDIIDKTFEEADTK 178

Query: 183 HDGKLTRENFEEAV 224
           HDGK+ +E +   V
Sbjct: 179 HDGKIDKEEWRSLV 192
>sp|P37235|HPCL1_HUMAN Hippocalcin-like protein 1 (Visinin-like protein 3) (VILIP-3)
           (Calcium-binding protein BDR-1) (HLP2)
          Length = 193

 Score = 47.8 bits (112), Expect = 1e-05
 Identities = 24/71 (33%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
 Frame = +3

Query: 3   EIKFAFTVYDLNSDGLISREEMFQLLKPTLVRAYDQPTEEDPDEGTKD-LVDMTFKKFDV 179
           ++K+AF++YDL+ +G ISR EM ++++  + +      +   DE T +   D  F++ D 
Sbjct: 100 KLKWAFSMYDLDGNGYISRSEMLEIVQ-AIYKMVSSVMKMPEDESTPEKRTDKIFRQMDT 158

Query: 180 DHDGKLTRENF 212
           ++DGKL+ E F
Sbjct: 159 NNDGKLSLEEF 169
>sp|Q9JM59|KCIP2_RAT Kv channel-interacting protein 2 (KChIP2) (A-type potassium channel
           modulatory protein 2) (Potassium channel-interacting
           protein 2)
          Length = 270

 Score = 47.8 bits (112), Expect = 1e-05
 Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
 Frame = +3

Query: 6   IKFAFTVYDLNSDGLISREEMFQLLKP--TLVRAYDQPTEEDPDEGTKDLVDMTFKKFDV 179
           + +AF +YDLN DG I++EEM  ++K    ++  Y  P     +E  ++ V+  F+K D 
Sbjct: 181 LSWAFNLYDLNKDGCITKEEMLDIMKSIYDMMGKYTYPALR--EEApreHVESFFQKMDR 238

Query: 180 DHDGKLTRENFEEA 221
           + DG +T E F E+
Sbjct: 239 NKDGVVTIEEFIES 252
>sp|P62749|HPCL1_RAT Hippocalcin-like protein 1 (Visinin-like protein 3) (VILIP-3)
           (Neural visinin-like protein 3) (NVL-3) (NVP-3)
 sp|P62748|HPCL1_MOUSE Hippocalcin-like protein 1 (Visinin-like protein 3) (VILIP-3)
           (Neural visinin-like protein 3) (NVL-3) (NVP-3)
          Length = 193

 Score = 47.8 bits (112), Expect = 1e-05
 Identities = 24/71 (33%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
 Frame = +3

Query: 3   EIKFAFTVYDLNSDGLISREEMFQLLKPTLVRAYDQPTEEDPDEGTKD-LVDMTFKKFDV 179
           ++K+AF++YDL+ +G ISR EM ++++  + +      +   DE T +   D  F++ D 
Sbjct: 100 KLKWAFSMYDLDGNGYISRSEMLEIVQ-AIYKMVSSVMKMPEDESTPEKRTDKIFRQMDT 158

Query: 180 DHDGKLTRENF 212
           ++DGKL+ E F
Sbjct: 159 NNDGKLSLEEF 169
>sp|Q8LEM7|CNBL3_ARATH Calcineurin B-like protein 3 (SOS3-like calcium-binding protein 6)
          Length = 226

 Score = 47.8 bits (112), Expect = 1e-05
 Identities = 24/74 (32%), Positives = 42/74 (56%)
 Frame = +3

Query: 3   EIKFAFTVYDLNSDGLISREEMFQLLKPTLVRAYDQPTEEDPDEGTKDLVDMTFKKFDVD 182
           +I F+F +YDL   G I R+E+ Q++  TL  +    +    DE  + ++D TF++ D  
Sbjct: 123 KIDFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLS----DEIIESIIDKTFEEADTK 178

Query: 183 HDGKLTRENFEEAV 224
           HDG++ +E +   V
Sbjct: 179 HDGRIDKEEWRTLV 192
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,537,536
Number of Sequences: 369166
Number of extensions: 714445
Number of successful extensions: 2481
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2263
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2392
length of database: 68,354,980
effective HSP length: 100
effective length of database: 49,881,480
effective search space used: 2344429560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)