Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_021_C14
(443 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|P37236|FREQ_DROME Frequenin-1 (d-FRQ) 58 8e-09
sp|Q6FLU4|CANB_CANGA Calcineurin B subunit (Protein phospha... 53 3e-07
sp|Q757B7|CANB_ASHGO Calcineurin B subunit (Protein phospha... 53 3e-07
sp|Q874T7|CANB_KLULA Calcineurin B subunit (Protein phospha... 52 8e-07
sp|P25296|CANB_YEAST Calcineurin B subunit (Protein phospha... 50 2e-06
sp|Q8LAS7|CNBL2_ARATH Calcineurin B-like protein 2 (SOS3-li... 49 4e-06
sp|P37235|HPCL1_HUMAN Hippocalcin-like protein 1 (Visinin-l... 48 1e-05
sp|Q9JM59|KCIP2_RAT Kv channel-interacting protein 2 (KChIP... 48 1e-05
sp|P62749|HPCL1_RAT Hippocalcin-like protein 1 (Visinin-lik... 48 1e-05
sp|Q8LEM7|CNBL3_ARATH Calcineurin B-like protein 3 (SOS3-li... 48 1e-05
>sp|P37236|FREQ_DROME Frequenin-1 (d-FRQ)
Length = 187
Score = 58.2 bits (139), Expect = 8e-09
Identities = 29/72 (40%), Positives = 44/72 (61%)
Frame = +3
Query: 3 EIKFAFTVYDLNSDGLISREEMFQLLKPTLVRAYDQPTEEDPDEGTKDLVDMTFKKFDVD 182
++++AF +YD+++DG I+REEM+ ++ QP ED + K VD F + D +
Sbjct: 100 KLQWAFRLYDVDNDGYITREEMYNIVDAIYQMVGQQPQSEDENTPQK-RVDKIFDQMDKN 158
Query: 183 HDGKLTRENFEE 218
HDGKLT E F E
Sbjct: 159 HDGKLTLEEFRE 170
Score = 35.4 bits (80), Expect = 0.057
Identities = 25/75 (33%), Positives = 34/75 (45%), Gaps = 3/75 (4%)
Frame = +3
Query: 9 KFA---FTVYDLNSDGLISREEMFQLLKPTLVRAYDQPTEEDPDEGTKDLVDMTFKKFDV 179
KFA F V+D N+DG I EE + L T D+ + F+ +DV
Sbjct: 63 KFASLVFRVFDENNDGSIEFEEFIRALSVTSKGNLDEKLQ------------WAFRLYDV 110
Query: 180 DHDGKLTRENFEEAV 224
D+DG +TRE V
Sbjct: 111 DNDGYITREEMYNIV 125
>sp|Q6FLU4|CANB_CANGA Calcineurin B subunit (Protein phosphatase 2B regulatory subunit)
(Calcineurin regulatory subunit)
Length = 175
Score = 52.8 bits (125), Expect = 3e-07
Identities = 28/74 (37%), Positives = 45/74 (60%)
Frame = +3
Query: 3 EIKFAFTVYDLNSDGLISREEMFQLLKPTLVRAYDQPTEEDPDEGTKDLVDMTFKKFDVD 182
++KFAF +YD++ DGLIS E+F +LK + D D+ + +VD T + D+D
Sbjct: 94 KLKFAFKIYDIDKDGLISNGELFIVLKIMVGSNLD-------DKQLQQIVDRTIMENDLD 146
Query: 183 HDGKLTRENFEEAV 224
DG+L+ E F+ A+
Sbjct: 147 GDGQLSFEEFKSAI 160
>sp|Q757B7|CANB_ASHGO Calcineurin B subunit (Protein phosphatase 2B regulatory subunit)
(Calcineurin regulatory subunit)
Length = 175
Score = 52.8 bits (125), Expect = 3e-07
Identities = 29/74 (39%), Positives = 44/74 (59%)
Frame = +3
Query: 3 EIKFAFTVYDLNSDGLISREEMFQLLKPTLVRAYDQPTEEDPDEGTKDLVDMTFKKFDVD 182
+++FAF +YD++ DG IS E+F +LK + + DE + +VD T + DVD
Sbjct: 94 KLRFAFKIYDIDKDGYISNGELFIVLKIMVGNNLE-------DEQLQQVVDRTIMENDVD 146
Query: 183 HDGKLTRENFEEAV 224
DGKL+ E F+ AV
Sbjct: 147 GDGKLSFEEFKSAV 160
>sp|Q874T7|CANB_KLULA Calcineurin B subunit (Protein phosphatase 2B regulatory subunit)
(Calcineurin regulatory subunit)
Length = 175
Score = 51.6 bits (122), Expect = 8e-07
Identities = 28/73 (38%), Positives = 44/73 (60%)
Frame = +3
Query: 3 EIKFAFTVYDLNSDGLISREEMFQLLKPTLVRAYDQPTEEDPDEGTKDLVDMTFKKFDVD 182
+++FAF +YD++ DG IS E+F +LK + + DE + +VD T + DVD
Sbjct: 94 KLRFAFRIYDIDKDGYISNGELFIVLKIMVGTNLE-------DEQLQQIVDRTIMENDVD 146
Query: 183 HDGKLTRENFEEA 221
DGKL+ E F++A
Sbjct: 147 GDGKLSFEEFKKA 159
>sp|P25296|CANB_YEAST Calcineurin B subunit (Protein phosphatase 2B regulatory subunit)
(Calcineurin regulatory subunit)
Length = 175
Score = 50.4 bits (119), Expect = 2e-06
Identities = 27/74 (36%), Positives = 43/74 (58%)
Frame = +3
Query: 3 EIKFAFTVYDLNSDGLISREEMFQLLKPTLVRAYDQPTEEDPDEGTKDLVDMTFKKFDVD 182
+++FAF +YD++ DG IS E+F +LK + D DE + +VD T + D D
Sbjct: 94 KLRFAFKIYDIDKDGFISNGELFIVLKIMVGSNLD-------DEQLQQIVDRTIVENDSD 146
Query: 183 HDGKLTRENFEEAV 224
DG+L+ E F+ A+
Sbjct: 147 GDGRLSFEEFKNAI 160
>sp|Q8LAS7|CNBL2_ARATH Calcineurin B-like protein 2 (SOS3-like calcium-binding protein 1)
Length = 226
Score = 49.3 bits (116), Expect = 4e-06
Identities = 25/74 (33%), Positives = 41/74 (55%)
Frame = +3
Query: 3 EIKFAFTVYDLNSDGLISREEMFQLLKPTLVRAYDQPTEEDPDEGTKDLVDMTFKKFDVD 182
+I F+F +YDL G I R+E+ Q++ TL + D +D++D TF++ D
Sbjct: 123 KIHFSFQLYDLKQQGFIERQEVKQMVVATLAES----GMNLKDTVIEDIIDKTFEEADTK 178
Query: 183 HDGKLTRENFEEAV 224
HDGK+ +E + V
Sbjct: 179 HDGKIDKEEWRSLV 192
>sp|P37235|HPCL1_HUMAN Hippocalcin-like protein 1 (Visinin-like protein 3) (VILIP-3)
(Calcium-binding protein BDR-1) (HLP2)
Length = 193
Score = 47.8 bits (112), Expect = 1e-05
Identities = 24/71 (33%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Frame = +3
Query: 3 EIKFAFTVYDLNSDGLISREEMFQLLKPTLVRAYDQPTEEDPDEGTKD-LVDMTFKKFDV 179
++K+AF++YDL+ +G ISR EM ++++ + + + DE T + D F++ D
Sbjct: 100 KLKWAFSMYDLDGNGYISRSEMLEIVQ-AIYKMVSSVMKMPEDESTPEKRTDKIFRQMDT 158
Query: 180 DHDGKLTRENF 212
++DGKL+ E F
Sbjct: 159 NNDGKLSLEEF 169
>sp|Q9JM59|KCIP2_RAT Kv channel-interacting protein 2 (KChIP2) (A-type potassium channel
modulatory protein 2) (Potassium channel-interacting
protein 2)
Length = 270
Score = 47.8 bits (112), Expect = 1e-05
Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
Frame = +3
Query: 6 IKFAFTVYDLNSDGLISREEMFQLLKP--TLVRAYDQPTEEDPDEGTKDLVDMTFKKFDV 179
+ +AF +YDLN DG I++EEM ++K ++ Y P +E ++ V+ F+K D
Sbjct: 181 LSWAFNLYDLNKDGCITKEEMLDIMKSIYDMMGKYTYPALR--EEApreHVESFFQKMDR 238
Query: 180 DHDGKLTRENFEEA 221
+ DG +T E F E+
Sbjct: 239 NKDGVVTIEEFIES 252
>sp|P62749|HPCL1_RAT Hippocalcin-like protein 1 (Visinin-like protein 3) (VILIP-3)
(Neural visinin-like protein 3) (NVL-3) (NVP-3)
sp|P62748|HPCL1_MOUSE Hippocalcin-like protein 1 (Visinin-like protein 3) (VILIP-3)
(Neural visinin-like protein 3) (NVL-3) (NVP-3)
Length = 193
Score = 47.8 bits (112), Expect = 1e-05
Identities = 24/71 (33%), Positives = 44/71 (61%), Gaps = 1/71 (1%)
Frame = +3
Query: 3 EIKFAFTVYDLNSDGLISREEMFQLLKPTLVRAYDQPTEEDPDEGTKD-LVDMTFKKFDV 179
++K+AF++YDL+ +G ISR EM ++++ + + + DE T + D F++ D
Sbjct: 100 KLKWAFSMYDLDGNGYISRSEMLEIVQ-AIYKMVSSVMKMPEDESTPEKRTDKIFRQMDT 158
Query: 180 DHDGKLTRENF 212
++DGKL+ E F
Sbjct: 159 NNDGKLSLEEF 169
>sp|Q8LEM7|CNBL3_ARATH Calcineurin B-like protein 3 (SOS3-like calcium-binding protein 6)
Length = 226
Score = 47.8 bits (112), Expect = 1e-05
Identities = 24/74 (32%), Positives = 42/74 (56%)
Frame = +3
Query: 3 EIKFAFTVYDLNSDGLISREEMFQLLKPTLVRAYDQPTEEDPDEGTKDLVDMTFKKFDVD 182
+I F+F +YDL G I R+E+ Q++ TL + + DE + ++D TF++ D
Sbjct: 123 KIDFSFQLYDLKQQGFIERQEVKQMVVATLAESGMNLS----DEIIESIIDKTFEEADTK 178
Query: 183 HDGKLTRENFEEAV 224
HDG++ +E + V
Sbjct: 179 HDGRIDKEEWRTLV 192
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 42,537,536
Number of Sequences: 369166
Number of extensions: 714445
Number of successful extensions: 2481
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2263
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2392
length of database: 68,354,980
effective HSP length: 100
effective length of database: 49,881,480
effective search space used: 2344429560
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)