Planaria EST Database


DrC_02477

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_02477
         (648 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q80UU9|PGRC2_MOUSE  Membrane associated progesterone rece...   138   1e-32
sp|Q5XIU9|PGRC2_RAT  Membrane associated progesterone recept...   138   1e-32
sp|O15173|PGRC2_HUMAN  Membrane associated progesterone rece...   138   1e-32
sp|O00264|PGRC1_HUMAN  Membrane associated progesterone rece...   123   5e-28
sp|O55022|PGRC1_MOUSE  Membrane associated progesterone rece...   121   2e-27
sp|Q95250|PGRC1_PIG  Membrane associated progesterone recept...   121   2e-27
sp|P70580|PGRC1_RAT  Membrane associated progesterone recept...   119   5e-27
sp|O13995|YL81_SCHPO  Hypothetical protein C25B8.01 in chrom...    86   8e-17
sp|Q9SK39|SBP3_ARATH  Putative steroid binding protein 3 (At...    77   3e-14
sp|Q12091|DAP1_YEAST  Damage response protein 1                    74   2e-13
>sp|Q80UU9|PGRC2_MOUSE Membrane associated progesterone receptor component 2
          Length = 214

 Score =  138 bits (348), Expect = 1e-32
 Identities = 65/117 (55%), Positives = 84/117 (71%)
 Frame = +1

Query: 91  LPKLKMRDFTVSALAQFDGINSPYRLIAVNGNIFDVTKVGQNLYGKGAPYSNFAGRDASR 270
           LP++K RDF++  L Q+DG  +P  L+AVNG +FDVTK G   YG   PY  FAGRDASR
Sbjct: 86  LPRMKKRDFSLEQLRQYDGARTPRILLAVNGKVFDVTK-GSKFYGPAGPYGIFAGRDASR 144

Query: 271 ALSTFSNNPQVFKDEYDDLTDLNSDEMGRLKEWELQFKEKYQLVGRLLRPGEPAHQY 441
            L+TF  +    +DEYDDL+DLN+ +M  ++EWE+QFKEKY  VGRLL+PGE   +Y
Sbjct: 145 GLATFCLDKDALRDEYDDLSDLNAVQMESVREWEMQFKEKYDYVGRLLKPGEEPSEY 201
>sp|Q5XIU9|PGRC2_RAT Membrane associated progesterone receptor component 2
          Length = 217

 Score =  138 bits (348), Expect = 1e-32
 Identities = 65/117 (55%), Positives = 84/117 (71%)
 Frame = +1

Query: 91  LPKLKMRDFTVSALAQFDGINSPYRLIAVNGNIFDVTKVGQNLYGKGAPYSNFAGRDASR 270
           LP++K RDF++  L Q+DG  +P  L+AVNG +FDVTK G   YG   PY  FAGRDASR
Sbjct: 89  LPRMKKRDFSLEQLRQYDGARTPRILLAVNGKVFDVTK-GSKFYGPAGPYGIFAGRDASR 147

Query: 271 ALSTFSNNPQVFKDEYDDLTDLNSDEMGRLKEWELQFKEKYQLVGRLLRPGEPAHQY 441
            L+TF  +    +DEYDDL+DLN+ +M  ++EWE+QFKEKY  VGRLL+PGE   +Y
Sbjct: 148 GLATFCLDKDALRDEYDDLSDLNAVQMESVREWEMQFKEKYDYVGRLLKPGEEPSEY 204
>sp|O15173|PGRC2_HUMAN Membrane associated progesterone receptor component 2 (Progesterone
           membrane binding protein) (Steroid receptor protein DG6)
          Length = 223

 Score =  138 bits (347), Expect = 1e-32
 Identities = 65/117 (55%), Positives = 84/117 (71%)
 Frame = +1

Query: 91  LPKLKMRDFTVSALAQFDGINSPYRLIAVNGNIFDVTKVGQNLYGKGAPYSNFAGRDASR 270
           LP++K RDF++  L Q+DG  +P  L+AVNG +FDVTK G   YG   PY  FAGRDASR
Sbjct: 95  LPRMKKRDFSLEQLRQYDGSRNPRILLAVNGKVFDVTK-GSKFYGPAGPYGIFAGRDASR 153

Query: 271 ALSTFSNNPQVFKDEYDDLTDLNSDEMGRLKEWELQFKEKYQLVGRLLRPGEPAHQY 441
            L+TF  +    +DEYDDL+DLN+ +M  ++EWE+QFKEKY  VGRLL+PGE   +Y
Sbjct: 154 GLATFCLDKDALRDEYDDLSDLNAVQMESVREWEMQFKEKYDYVGRLLKPGEEPSEY 210
>sp|O00264|PGRC1_HUMAN Membrane associated progesterone receptor component 1 (mPR)
          Length = 195

 Score =  123 bits (308), Expect = 5e-28
 Identities = 61/117 (52%), Positives = 78/117 (66%)
 Frame = +1

Query: 91  LPKLKMRDFTVSALAQFDGINSPYRLIAVNGNIFDVTKVGQNLYGKGAPYSNFAGRDASR 270
           LP+LK RDFT + L +FDG+  P  L+A+NG +FDVTK G+  YG   PY  FAGRDASR
Sbjct: 65  LPRLKRRDFTPAELRRFDGVQDPRILMAINGKVFDVTK-GRKFYGPEGPYGVFAGRDASR 123

Query: 271 ALSTFSNNPQVFKDEYDDLTDLNSDEMGRLKEWELQFKEKYQLVGRLLRPGEPAHQY 441
            L+TF  + +  KDEYDDL+DL + +   L +WE QF  KY  VG+LL+ GE    Y
Sbjct: 124 GLATFCLDKEALKDEYDDLSDLTAAQQETLSDWESQFTFKYHHVGKLLKEGEEPTVY 180
>sp|O55022|PGRC1_MOUSE Membrane associated progesterone receptor component 1
          Length = 195

 Score =  121 bits (303), Expect = 2e-27
 Identities = 60/117 (51%), Positives = 77/117 (65%)
 Frame = +1

Query: 91  LPKLKMRDFTVSALAQFDGINSPYRLIAVNGNIFDVTKVGQNLYGKGAPYSNFAGRDASR 270
           LP+LK RDFT + L +FDG+  P  L+A+NG +FDVTK G+  YG   PY  FAGRDASR
Sbjct: 65  LPRLKRRDFTPAELRRFDGVQDPRILMAINGKVFDVTK-GRKFYGPEGPYGVFAGRDASR 123

Query: 271 ALSTFSNNPQVFKDEYDDLTDLNSDEMGRLKEWELQFKEKYQLVGRLLRPGEPAHQY 441
            L+TF  + +  KDEYDDL+DL   +   L +W+ QF  KY  VG+LL+ GE    Y
Sbjct: 124 GLATFCLDKEALKDEYDDLSDLTPAQQETLSDWDSQFTFKYHHVGKLLKEGEEPTVY 180
>sp|Q95250|PGRC1_PIG Membrane associated progesterone receptor component 1
          Length = 194

 Score =  121 bits (303), Expect = 2e-27
 Identities = 60/117 (51%), Positives = 77/117 (65%)
 Frame = +1

Query: 91  LPKLKMRDFTVSALAQFDGINSPYRLIAVNGNIFDVTKVGQNLYGKGAPYSNFAGRDASR 270
           LP+LK RDFT + L +FDG+  P  L+A+NG +FDVTK G+  YG   PY  FAGRDASR
Sbjct: 64  LPRLKRRDFTPAELRRFDGVQDPRILMAINGKVFDVTK-GRKFYGPEGPYGVFAGRDASR 122

Query: 271 ALSTFSNNPQVFKDEYDDLTDLNSDEMGRLKEWELQFKEKYQLVGRLLRPGEPAHQY 441
            L+TF  + +  KDEYDDL+DL   +   L +W+ QF  KY  VG+LL+ GE    Y
Sbjct: 123 GLATFCLDKEALKDEYDDLSDLTPAQQETLNDWDSQFTFKYHHVGKLLKEGEEPTVY 179
>sp|P70580|PGRC1_RAT Membrane associated progesterone receptor component 1 (Acidic 25
           kDa protein) (25-DX)
          Length = 195

 Score =  119 bits (299), Expect = 5e-27
 Identities = 59/117 (50%), Positives = 77/117 (65%)
 Frame = +1

Query: 91  LPKLKMRDFTVSALAQFDGINSPYRLIAVNGNIFDVTKVGQNLYGKGAPYSNFAGRDASR 270
           LP+LK RDFT + L ++DG+  P  L+A+NG +FDVTK G+  YG   PY  FAGRDASR
Sbjct: 65  LPRLKPRDFTPAELRRYDGVQDPRILMAINGKVFDVTK-GRKFYGPEGPYGVFAGRDASR 123

Query: 271 ALSTFSNNPQVFKDEYDDLTDLNSDEMGRLKEWELQFKEKYQLVGRLLRPGEPAHQY 441
            L+TF  + +  KDEYDDL+DL   +   L +W+ QF  KY  VG+LL+ GE    Y
Sbjct: 124 GLATFCLDKEALKDEYDDLSDLTPAQQETLNDWDSQFTFKYHHVGKLLKEGEEPTVY 180
>sp|O13995|YL81_SCHPO Hypothetical protein C25B8.01 in chromosome I
          Length = 166

 Score = 85.9 bits (211), Expect = 8e-17
 Identities = 50/126 (39%), Positives = 74/126 (58%), Gaps = 5/126 (3%)
 Frame = +1

Query: 64  KSVIYNDEVLPKL-KMRDFTVSALAQFDGINSPYRLIAVNGNIFDVTKVGQNLYGKGAPY 240
           KS I ++E  PK  + RD+T + L +++G  +    +A+ G +++VT +G   YG   PY
Sbjct: 27  KSFIASEE--PKQPEWRDYTPAELKEYNGSKNSLVFLAIKGTVYNVT-MGSKFYGPQGPY 83

Query: 241 SNFAGRDASRALSTFSNNPQVFKD----EYDDLTDLNSDEMGRLKEWELQFKEKYQLVGR 408
           S FAG DASR L+  S + +   D    E DD +DLN +E   L +W+  F +KYQ VGR
Sbjct: 84  SAFAGHDASRGLAKNSFDDEFIPDSDAEELDDCSDLNDEERQALNDWKAFFDQKYQAVGR 143

Query: 409 LLRPGE 426
           L+ P E
Sbjct: 144 LISpre 149
>sp|Q9SK39|SBP3_ARATH Putative steroid binding protein 3 (AtMP3)
          Length = 100

 Score = 77.4 bits (189), Expect = 3e-14
 Identities = 41/102 (40%), Positives = 61/102 (59%), Gaps = 1/102 (0%)
 Frame = +1

Query: 112 DFTVSALAQFDGINSPYRL-IAVNGNIFDVTKVGQNLYGKGAPYSNFAGRDASRALSTFS 288
           +FT   L+Q++G +    + +A+ G +FDVT  G++ YG G  YS FAG+DASRAL   S
Sbjct: 2   EFTAEQLSQYNGTDESKPIYVAIKGRVFDVT-TGKSFYGSGGDYSMFAGKDASRALGKMS 60

Query: 289 NNPQVFKDEYDDLTDLNSDEMGRLKEWELQFKEKYQLVGRLL 414
            N +   D    L  L   E+  L +WE +F+ KY +VGR++
Sbjct: 61  KNEE---DVSPSLEGLTEKEINTLNDWETKFEAKYPVVGRVV 99
>sp|Q12091|DAP1_YEAST Damage response protein 1
          Length = 152

 Score = 74.3 bits (181), Expect = 2e-13
 Identities = 41/108 (37%), Positives = 61/108 (56%), Gaps = 4/108 (3%)
 Frame = +1

Query: 112 DFTVSALAQFDGINSPYRLIAVNGNIFDVTKVGQNLYGKGAPYSNFAGRDASRALSTFSN 291
           +F    L++F+G +     IA+ G ++D T+ G+  YG   PY+NFAG DASR L+  S 
Sbjct: 43  NFFPRTLSKFNGHDDEKIFIAIRGKVYDCTR-GRQFYGPSGPYTNFAGHDASRGLALNSF 101

Query: 292 NPQVFKD---EYDDLTDLNSDEMGRLKEWELQFKEKYQLVGRLL-RPG 423
           +  V KD     D L DL  +++  L EW+  F+ KY  +G L+  PG
Sbjct: 102 DLDVIKDWDQPIDPLDDLTKEQIDALDEWQEHFENKYPCIGTLIPEPG 149
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,246,855
Number of Sequences: 369166
Number of extensions: 1000547
Number of successful extensions: 2425
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2363
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2411
length of database: 68,354,980
effective HSP length: 106
effective length of database: 48,773,070
effective search space used: 5316264630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)