Planaria EST Database


DrC_02445

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_02445
         (687 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9BV86|CI032_HUMAN  Protein C9orf32                            180   4e-45
sp|Q5BJX0|CI032_RAT  Protein C9orf32 homolog                      179   6e-45
sp|Q8R2U4|CI032_MOUSE  Protein C9orf32 homolog                    178   1e-44
sp|P38340|YB9H_YEAST  Protein YBR261C                             134   2e-31
sp|O13748|YDRE_SCHPO  Hypothetical protein C16E8.14c in chro...   128   2e-29
sp|Q98MF0|PYRG_RHILO  CTP synthase (UTP--ammonia ligase) (CT...    33   0.54 
sp|Q8TU79|SYA_METAC  Alanyl-tRNA synthetase (Alanine--tRNA l...    31   2.7  
sp|Q98KB1|MURD_RHILO  UDP-N-acetylmuramoylalanine--D-glutama...    31   2.7  
sp|Q92QA0|PYRG_RHIME  CTP synthase (UTP--ammonia ligase) (CT...    30   4.6  
sp|Q58055|Y638_METJA  Hypothetical protein MJ0638                  30   4.6  
>sp|Q9BV86|CI032_HUMAN Protein C9orf32
          Length = 223

 Score =  180 bits (456), Expect = 4e-45
 Identities = 92/209 (44%), Positives = 127/209 (60%), Gaps = 1/209 (0%)
 Frame = +1

Query: 4   RKYWKEVSPTVNGMLGGFEIVSDGDIKTSTXXXXXXXXXGFLTKSTGKALDCGSGIGRVT 183
           + YWK++ PTV+GMLGG+  +S  DI +S          G     T  ALDCG+GIGR+T
Sbjct: 17  KTYWKQIPPTVDGMLGGYGHISSIDINSSRKFLQRFLREGPNKTGTSCALDCGAGIGRIT 76

Query: 184 KNLLMPIFPKVDMVEVTKHFLDESYKYIGETSQSI-NRICCSLQNFTPNQNDYDLIWCQW 360
           K LL+P+F +VDMV++T+ FL ++  Y+GE  + + N  CC LQ+FTP  + YD+IW QW
Sbjct: 77  KRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWIQW 136

Query: 361 VTGHLTDQALVEFLERCITGLHSKNSLIVIKENVVKGNXXXXXXXXXXXTRPISLLKRLF 540
           V GHLTDQ L EFL RC  G    N +IVIK+N+ +              R + +++R+ 
Sbjct: 137 VIGHLTDQHLAEFLRRC-KGSLRPNGIIVIKDNMAQ-EGVILDDVDSSVCRDLDVVRRII 194

Query: 541 VQANLELIKEERQTEFPKELYPVWMFVLR 627
             A L L+ EERQ   P E+Y V+ F LR
Sbjct: 195 CSAGLSLLAEERQENLPDEIYHVYSFALR 223
>sp|Q5BJX0|CI032_RAT Protein C9orf32 homolog
          Length = 223

 Score =  179 bits (454), Expect = 6e-45
 Identities = 92/209 (44%), Positives = 128/209 (61%), Gaps = 1/209 (0%)
 Frame = +1

Query: 4   RKYWKEVSPTVNGMLGGFEIVSDGDIKTSTXXXXXXXXXGFLTKSTGKALDCGSGIGRVT 183
           + YWK++ PTV+GMLGG+  +S+ D+ +S          G     T  ALDCG+GIGR+T
Sbjct: 17  KTYWKQIPPTVDGMLGGYGHISNIDLNSSRKFLQRFLREGPNKTGTSCALDCGAGIGRIT 76

Query: 184 KNLLMPIFPKVDMVEVTKHFLDESYKYIGETSQSI-NRICCSLQNFTPNQNDYDLIWCQW 360
           K LL+P+F  VDMV+VT+ FL ++  Y+GE  + + N  CC LQ+F+P  + YD+IW QW
Sbjct: 77  KRLLLPLFRVVDMVDVTEDFLAKAKTYLGEEGKRVRNYFCCGLQDFSPEPSSYDVIWIQW 136

Query: 361 VTGHLTDQALVEFLERCITGLHSKNSLIVIKENVVKGNXXXXXXXXXXXTRPISLLKRLF 540
           V GHLTDQ L EFL RC  GL   N +IVIK+N+ +              R + +++R+ 
Sbjct: 137 VIGHLTDQHLAEFLRRCRRGLR-PNGIIVIKDNMAQ-EGVILDDVDSSVCRDLEVVRRII 194

Query: 541 VQANLELIKEERQTEFPKELYPVWMFVLR 627
             A L L+ EERQ   P E+Y V+ F LR
Sbjct: 195 RSAGLSLLAEERQENLPDEIYHVYSFALR 223
>sp|Q8R2U4|CI032_MOUSE Protein C9orf32 homolog
          Length = 223

 Score =  178 bits (452), Expect = 1e-44
 Identities = 92/209 (44%), Positives = 127/209 (60%), Gaps = 1/209 (0%)
 Frame = +1

Query: 4   RKYWKEVSPTVNGMLGGFEIVSDGDIKTSTXXXXXXXXXGFLTKSTGKALDCGSGIGRVT 183
           + YWK++ PTV+GMLGG+  +S+ D+ +S          G     T  ALDCG+GIGR+T
Sbjct: 17  KTYWKQIPPTVDGMLGGYGHISNIDLNSSRKFLQRFLREGPNKTGTSCALDCGAGIGRIT 76

Query: 184 KNLLMPIFPKVDMVEVTKHFLDESYKYIGETSQSI-NRICCSLQNFTPNQNDYDLIWCQW 360
           K LL+P+F  VDMV+VT+ FL ++  Y+GE  + + N  CC LQ+F+P    YD+IW QW
Sbjct: 77  KRLLLPLFRVVDMVDVTEDFLAKAKTYLGEEGKRVRNYFCCGLQDFSPEPGSYDVIWIQW 136

Query: 361 VTGHLTDQALVEFLERCITGLHSKNSLIVIKENVVKGNXXXXXXXXXXXTRPISLLKRLF 540
           V GHLTDQ L EFL RC  GL   N +IVIK+N+ +              R + +++R+ 
Sbjct: 137 VIGHLTDQHLAEFLRRCKRGLR-PNGIIVIKDNMAQ-EGVILDDVDSSVCRDLEVVRRII 194

Query: 541 VQANLELIKEERQTEFPKELYPVWMFVLR 627
             A L L+ EERQ   P E+Y V+ F LR
Sbjct: 195 RTAGLSLLAEERQENLPDEIYHVYSFALR 223
>sp|P38340|YB9H_YEAST Protein YBR261C
          Length = 232

 Score =  134 bits (337), Expect = 2e-31
 Identities = 81/217 (37%), Positives = 118/217 (54%), Gaps = 7/217 (3%)
 Frame = +1

Query: 10  YWKEVSPTVNGMLGGF---EIVSDGDIKTSTXXXXXXXXXGFLTKSTGK-ALDCGSGIGR 177
           YW +V  TV+G+LGG+    +V   D+  S              ++  K A+D G+GIGR
Sbjct: 17  YWTDVDATVDGVLGGYGEGTVVPTMDVLGSNNFLRKLKSRMLPQENNVKYAVDIGAGIGR 76

Query: 178 VTKNLLMPIFPKVDMVEVTKHFLDESYKYIGETSQS--INRIC-CSLQNFTPNQNDYDLI 348
           V+K +L     K+D+VE  K F+++ +  + E      I +I    +Q++TP+   Y LI
Sbjct: 77  VSKTMLHKHAAKIDLVEPVKPFIEQMHVELAELKDKGQIGQIYEVGMQDWTPDAGKYWLI 136

Query: 349 WCQWVTGHLTDQALVEFLERCITGLHSKNSLIVIKENVVKGNXXXXXXXXXXXTRPISLL 528
           WCQW  GHL D  LV FL+RCI GL   N  IV+KEN    +           TR  +  
Sbjct: 137 WCQWCVGHLPDAELVAFLKRCIVGL-QPNGTIVVKENNTPTDTDDFDETDSSVTRSDAKF 195

Query: 529 KRLFVQANLELIKEERQTEFPKELYPVWMFVLRPISN 639
           +++F +A L+LI  ERQ   P+ELYPV M+ L+P+ N
Sbjct: 196 RQIFEEAGLKLIASERQRGLpreLYPVRMYALKPMPN 232
>sp|O13748|YDRE_SCHPO Hypothetical protein C16E8.14c in chromosome I
          Length = 219

 Score =  128 bits (321), Expect = 2e-29
 Identities = 81/213 (38%), Positives = 111/213 (52%), Gaps = 3/213 (1%)
 Frame = +1

Query: 10  YWKEVSPTVNGMLGGF---EIVSDGDIKTSTXXXXXXXXXGFLTKSTGKALDCGSGIGRV 180
           YW  V PTV+GMLGG     I     + + T         G +      A DCG+GIGRV
Sbjct: 13  YWNGVQPTVDGMLGGLGTGRIPQTDVVGSRTFLNRLNYRIGKIENLV--AADCGAGIGRV 70

Query: 181 TKNLLMPIFPKVDMVEVTKHFLDESYKYIGETSQSINRICCSLQNFTPNQNDYDLIWCQW 360
           T+N+L+ I   VD+VE  ++F+  + K +     S   +   LQN+TP +N Y LIW QW
Sbjct: 71  TENVLLKIASHVDLVEPVENFISTAKKQLATKPCSFINV--GLQNWTPEKNRYGLIWNQW 128

Query: 361 VTGHLTDQALVEFLERCITGLHSKNSLIVIKENVVKGNXXXXXXXXXXXTRPISLLKRLF 540
              HLTD+ L+ +L RC   +  K  +I +KEN V              TR    LK LF
Sbjct: 129 CLSHLTDEDLIAYLSRCCEAIQEK-GVICVKEN-VSSFEDTFDPIDSSVTRCEQSLKSLF 186

Query: 541 VQANLELIKEERQTEFPKELYPVWMFVLRPISN 639
            +ANL ++ E  Q  FP+EL+PV M+ L P S+
Sbjct: 187 KKANLVVVAETLQHGFPEELFPVKMYALVPHSS 219
>sp|Q98MF0|PYRG_RHILO CTP synthase (UTP--ammonia ligase) (CTP synthetase)
          Length = 542

 Score = 33.5 bits (75), Expect = 0.54
 Identities = 31/133 (23%), Positives = 54/133 (40%), Gaps = 3/133 (2%)
 Frame = +1

Query: 16  KEVSPTVNGMLGGFEIVSDGDIKTSTXXXXXXXXXGFLTKSTGKALDCGSGI--GRVTKN 189
           K++ P +N   G       G++  +          G   + TG++ +    I  GR+ KN
Sbjct: 38  KKLDPYLNVDPGTMSPYQHGEVFVTDDGAETDLDLGHYERFTGRSANQQDNITTGRIYKN 97

Query: 190 LLMPIFPKVDMVEVTKHFLDESYKYIGETSQSINRICCSLQNFTPNQN-DYDLIWCQWVT 366
           ++                 +    Y+G T Q I  +   ++NF  N N DYD + C+ + 
Sbjct: 98  IIER---------------ERRGDYLGATVQVIPHVTDEIKNFVLNGNDDYDFVLCE-IG 141

Query: 367 GHLTDQALVEFLE 405
           G + D   + FLE
Sbjct: 142 GTVGDIEAMPFLE 154
>sp|Q8TU79|SYA_METAC Alanyl-tRNA synthetase (Alanine--tRNA ligase) (AlaRS)
          Length = 925

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 24/76 (31%), Positives = 38/76 (50%), Gaps = 1/76 (1%)
 Frame = -2

Query: 254 DSSKKCLVTSTMSTLGKIGISKFLVTRPIPDPQSRALPVDFVRNPLLIKFNNKFVDVLIS 75
           D  + C  T  +ST G IG  K L T  I D   R   V+F      ++   K   +L+ 
Sbjct: 709 DDVEACGGTHCLST-GVIGPIKILKTERIQDGVER---VEFAAGIAAVRAMQKMESLLVD 764

Query: 74  PSETISKPP-NIPLTV 30
            ++T+S PP ++P++V
Sbjct: 765 SAKTLSVPPEHLPVSV 780
>sp|Q98KB1|MURD_RHILO UDP-N-acetylmuramoylalanine--D-glutamate ligase
           (UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase)
           (D-glutamic acid-adding enzyme)
          Length = 466

 Score = 31.2 bits (69), Expect = 2.7
 Identities = 30/111 (27%), Positives = 44/111 (39%)
 Frame = +1

Query: 127 LTKSTGKALDCGSGIGRVTKNLLMPIFPKVDMVEVTKHFLDESYKYIGETSQSINRICCS 306
           + KS G+    G  IGR    L        D  +  +HF+ E   Y  + + SIN     
Sbjct: 135 ILKSAGRDTQMGGNIGRAVMTL--------DPPKPDRHFVVECSSYQIDLAPSINPTAGI 186

Query: 307 LQNFTPNQNDYDLIWCQWVTGHLTDQALVEFLERCITGLHSKNSLIVIKEN 459
           L N TP+  D           H T Q      ER + G  S+ ++I I ++
Sbjct: 187 LLNLTPDHLD----------RHGTMQHYASIKERLVAG--SETAIIGIDDS 225
>sp|Q92QA0|PYRG_RHIME CTP synthase (UTP--ammonia ligase) (CTP synthetase)
          Length = 542

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 18/62 (29%), Positives = 33/62 (53%), Gaps = 3/62 (4%)
 Frame = +1

Query: 229 VTKHFLDESYK--YIGETSQSINRICCSLQNF-TPNQNDYDLIWCQWVTGHLTDQALVEF 399
           + K+ +D+  +  Y+G T Q I  +   ++NF T    DYD + C+ + G + D   + F
Sbjct: 94  IYKNIIDKERRGDYLGATVQVIPHVTNEIKNFVTEGNEDYDFVICE-IGGTVGDIEAMPF 152

Query: 400 LE 405
           +E
Sbjct: 153 ME 154
>sp|Q58055|Y638_METJA Hypothetical protein MJ0638
          Length = 225

 Score = 30.4 bits (67), Expect = 4.6
 Identities = 30/122 (24%), Positives = 47/122 (38%), Gaps = 7/122 (5%)
 Frame = +1

Query: 124 FLTKSTGKALDCGSGIGRVTKNLLMPIFPKVDMVEVTKHF----LDESYKYIGETSQSIN 291
           F  K     LDCG G G                  +TK F    LD S   +        
Sbjct: 42  FENKKDFLVLDCGCGFGA--------------FYNLTKDFNTIYLDISLNLLKRFKLKER 87

Query: 292 RICCSLQNFTPNQNDYDLIWCQWVTGHLTDQALVEFLERCITGLHSKNSLIVI---KENV 462
           +IC ++ +     N +DL+ C  V  H+     +  + R    L +K  LIV+   K+++
Sbjct: 88  KICANILHLPFKDNTFDLVLCINVLEHVNYLKALNEIRRI---LKNKGKLIVVVVNKDSL 144

Query: 463 VK 468
           +K
Sbjct: 145 IK 146
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 70,916,528
Number of Sequences: 369166
Number of extensions: 1283926
Number of successful extensions: 3223
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3136
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3210
length of database: 68,354,980
effective HSP length: 107
effective length of database: 48,588,335
effective search space used: 5879188535
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)