Planaria EST Database


DrC_02443

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_02443
         (555 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q7WQN2|GPMA_BORBR  2,3-bisphosphoglycerate-dependent phos...   187   1e-47
sp|Q7W1Q6|GPMA_BORPA  2,3-bisphosphoglycerate-dependent phos...   187   1e-47
sp|Q8KFC8|GPMA_CHLTE  2,3-bisphosphoglycerate-dependent phos...   186   3e-47
sp|Q8ZGY5|GPMA_YERPE  2,3-bisphosphoglycerate-dependent phos...   181   8e-46
sp|Q8Y2I3|GPMA_RALSO  2,3-bisphosphoglycerate-dependent phos...   177   1e-44
sp|Q82TU0|GPMA2_NITEU  2,3-bisphosphoglycerate-dependent pho...   176   4e-44
sp|Q8Z8B2|GPMA_SALTI  2,3-bisphosphoglycerate-dependent phos...   174   1e-43
sp|Q8R7C8|GPMA_THETN  2,3-bisphosphoglycerate-dependent phos...   174   1e-43
sp|O51602|GPMA_BORBU  2,3-bisphosphoglycerate-dependent phos...   174   1e-43
sp|Q8ZQS2|GPMA_SALTY  2,3-bisphosphoglycerate-dependent phos...   174   2e-43
>sp|Q7WQN2|GPMA_BORBR 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
           (Phosphoglyceromutase) (PGAM) (BPG-dependent PGAM)
           (dPGM)
 sp|Q7VS43|GPMA_BORPE 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
           (Phosphoglyceromutase) (PGAM) (BPG-dependent PGAM)
           (dPGM)
          Length = 250

 Score =  187 bits (476), Expect = 1e-47
 Identities = 92/155 (59%), Positives = 111/155 (71%)
 Frame = +3

Query: 3   QGLNKSETAAKHGEHQVQIWRRAYAIAPPALETNDERWPGLEAKYKHLDLAIVPRTECLK 182
           QGLNK+ETAAK+G+ QV IWRRAYAIAP  L+  D R P  + +Y  +    +P TECLK
Sbjct: 94  QGLNKAETAAKYGDEQVLIWRRAYAIAPEPLDLEDPRHPRFDGRYAKIPADQLPATECLK 153

Query: 183 DTVERALPFWFDSIVPSIKDNKKVLIAAHGNSLRAVIKFLDKIGDDEIVGLNIPTGIPLV 362
           DTV R LPFW +SI P+I+  ++VL+AAHGNSLRA+IK LD + DD+IVG+NIPTG PLV
Sbjct: 154 DTVARVLPFWNESIAPAIRAGRRVLVAAHGNSLRALIKHLDNVSDDDIVGVNIPTGQPLV 213

Query: 363 YELNESLKPIRHYYLXXXXXXXXXXXXXXNQGKAK 467
           YEL+E LKPIRHYYL               QGKAK
Sbjct: 214 YELDEDLKPIRHYYLGDAAEIEAAMAAVAAQGKAK 248
>sp|Q7W1Q6|GPMA_BORPA 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
           (Phosphoglyceromutase) (PGAM) (BPG-dependent PGAM)
           (dPGM)
          Length = 250

 Score =  187 bits (476), Expect = 1e-47
 Identities = 92/155 (59%), Positives = 111/155 (71%)
 Frame = +3

Query: 3   QGLNKSETAAKHGEHQVQIWRRAYAIAPPALETNDERWPGLEAKYKHLDLAIVPRTECLK 182
           QGLNK+ETAAK+G+ QV IWRRAYAIAP  L+  D R P  + +Y  +    +P TECLK
Sbjct: 94  QGLNKAETAAKYGDEQVLIWRRAYAIAPEPLDLEDPRHPRFDGRYAKIPADQLPATECLK 153

Query: 183 DTVERALPFWFDSIVPSIKDNKKVLIAAHGNSLRAVIKFLDKIGDDEIVGLNIPTGIPLV 362
           DTV R LPFW +SI P+I+  ++VL+AAHGNSLRA+IK LD + DD+IVG+NIPTG PLV
Sbjct: 154 DTVARVLPFWNESIAPAIRAGRRVLVAAHGNSLRALIKHLDNVSDDDIVGVNIPTGQPLV 213

Query: 363 YELNESLKPIRHYYLXXXXXXXXXXXXXXNQGKAK 467
           YEL+E LKPIRHYYL               QGKAK
Sbjct: 214 YELDEDLKPIRHYYLGDAAEIEAAMAAVAAQGKAK 248
>sp|Q8KFC8|GPMA_CHLTE 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
           (Phosphoglyceromutase) (PGAM) (BPG-dependent PGAM)
           (dPGM)
          Length = 247

 Score =  186 bits (472), Expect = 3e-47
 Identities = 87/154 (56%), Positives = 109/154 (70%)
 Frame = +3

Query: 3   QGLNKSETAAKHGEHQVQIWRRAYAIAPPALETNDERWPGLEAKYKHLDLAIVPRTECLK 182
           QGLNK+ETA +HG+ QV IWRR+Y   PPAL  +DE WPG + +Y  L    +P TECLK
Sbjct: 94  QGLNKAETAQRHGDEQVLIWRRSYDTPPPALTESDEFWPGKDPRYASLSSQELPATECLK 153

Query: 183 DTVERALPFWFDSIVPSIKDNKKVLIAAHGNSLRAVIKFLDKIGDDEIVGLNIPTGIPLV 362
           DTV R LP+W ++I P I+D K V+I AHGNSLRA++K+LD I D++IVGLNIPTGIPLV
Sbjct: 154 DTVARFLPYWHETIAPQIRDGKNVIITAHGNSLRALVKYLDNISDEDIVGLNIPTGIPLV 213

Query: 363 YELNESLKPIRHYYLXXXXXXXXXXXXXXNQGKA 464
           YEL++ LKP++ YYL               QGKA
Sbjct: 214 YELDDDLKPLKSYYLGDQEELKKKVEVVVKQGKA 247
>sp|Q8ZGY5|GPMA_YERPE 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
           (Phosphoglyceromutase) (PGAM) (BPG-dependent PGAM)
           (dPGM)
          Length = 250

 Score =  181 bits (460), Expect = 8e-46
 Identities = 87/155 (56%), Positives = 112/155 (72%)
 Frame = +3

Query: 3   QGLNKSETAAKHGEHQVQIWRRAYAIAPPALETNDERWPGLEAKYKHLDLAIVPRTECLK 182
           QGLNKSETA K+G+ QV+ WRR +AI PPALE +DER+PG + +Y  L  A +P TE L 
Sbjct: 96  QGLNKSETAEKYGDEQVKQWRRGFAITPPALEKSDERFPGHDPRYAKLTDAELPTTESLA 155

Query: 183 DTVERALPFWFDSIVPSIKDNKKVLIAAHGNSLRAVIKFLDKIGDDEIVGLNIPTGIPLV 362
            T+ER +P+W D I P I   ++V+IAAHGNSLRA++K+LD +G+DEI+ LNIPTG+PLV
Sbjct: 156 LTIERVIPYWNDVIKPRIASGERVIIAAHGNSLRALVKYLDDLGEDEILELNIPTGVPLV 215

Query: 363 YELNESLKPIRHYYLXXXXXXXXXXXXXXNQGKAK 467
           YE +E+ KPI+HYYL              NQGKAK
Sbjct: 216 YEFDENFKPIKHYYLGNADEIAAKAAAVANQGKAK 250
>sp|Q8Y2I3|GPMA_RALSO 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
           (Phosphoglyceromutase) (PGAM) (BPG-dependent PGAM)
           (dPGM)
          Length = 248

 Score =  177 bits (450), Expect = 1e-44
 Identities = 89/154 (57%), Positives = 105/154 (68%)
 Frame = +3

Query: 6   GLNKSETAAKHGEHQVQIWRRAYAIAPPALETNDERWPGLEAKYKHLDLAIVPRTECLKD 185
           GLNK+ETAA++G+ QV +WRR+Y   PPALE  DER      +Y  L    VP TECLKD
Sbjct: 95  GLNKAETAAQYGDQQVLVWRRSYDTPPPALEAGDERDAYGNPRYAGLpreQVPLTECLKD 154

Query: 186 TVERALPFWFDSIVPSIKDNKKVLIAAHGNSLRAVIKFLDKIGDDEIVGLNIPTGIPLVY 365
           TV R LP W  SI P IK  K+V+IAAHGNS+RA++K+LD I DD+IVGLNIP G PLVY
Sbjct: 155 TVARVLPLWETSIAPDIKSGKRVVIAAHGNSIRALVKYLDNISDDDIVGLNIPNGTPLVY 214

Query: 366 ELNESLKPIRHYYLXXXXXXXXXXXXXXNQGKAK 467
           EL+ +LKPIRHYYL               QGKAK
Sbjct: 215 ELDANLKPIRHYYLGDQEAIAASLAAVAGQGKAK 248
>sp|Q82TU0|GPMA2_NITEU 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase 2
           (Phosphoglyceromutase 2) (PGAM 2) (BPG-dependent PGAM 2)
           (dPGM 2)
          Length = 249

 Score =  176 bits (445), Expect = 4e-44
 Identities = 83/154 (53%), Positives = 107/154 (69%)
 Frame = +3

Query: 3   QGLNKSETAAKHGEHQVQIWRRAYAIAPPALETNDERWPGLEAKYKHLDLAIVPRTECLK 182
           QGLNK+ETA ++G+ QV +WRR+Y I PP++  NDER+PG + +Y+++    +P  E LK
Sbjct: 94  QGLNKAETAKQYGDEQVLVWRRSYDIRPPSITINDERYPGFDLRYRNMSSGDIPLAESLK 153

Query: 183 DTVERALPFWFDSIVPSIKDNKKVLIAAHGNSLRAVIKFLDKIGDDEIVGLNIPTGIPLV 362
           DTV R LP+W  SI P IK  KKV+IAAHGNSLRA+IK LD I D +I+  NIPTGIPLV
Sbjct: 154 DTVARFLPYWNQSIAPQIKAEKKVIIAAHGNSLRALIKHLDNISDQDILNCNIPTGIPLV 213

Query: 363 YELNESLKPIRHYYLXXXXXXXXXXXXXXNQGKA 464
           YEL++ LKP+  YYL              NQGK+
Sbjct: 214 YELDDDLKPLNSYYLGDAGQIGEAISAVANQGKS 247
>sp|Q8Z8B2|GPMA_SALTI 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
           (Phosphoglyceromutase) (PGAM) (BPG-dependent PGAM)
           (dPGM)
          Length = 250

 Score =  174 bits (442), Expect = 1e-43
 Identities = 80/155 (51%), Positives = 111/155 (71%)
 Frame = +3

Query: 3   QGLNKSETAAKHGEHQVQIWRRAYAIAPPALETNDERWPGLEAKYKHLDLAIVPRTECLK 182
           QGLNK+ETA K+G+ QV+ WRR +A+ PP L  +DER+PG + +Y  L    +P TE L 
Sbjct: 96  QGLNKAETAEKYGDEQVKQWRRGFAVTPPELTKDDERYPGHDPRYAKLSEKELPLTESLA 155

Query: 183 DTVERALPFWFDSIVPSIKDNKKVLIAAHGNSLRAVIKFLDKIGDDEIVGLNIPTGIPLV 362
            T++R +P+W D+I+P +K  ++V+IAAHGNSLRA++K+LD + +DEI+ LNIPTG+PLV
Sbjct: 156 LTIDRVIPYWNDTILPRMKSGERVIIAAHGNSLRALVKYLDNMSEDEILELNIPTGVPLV 215

Query: 363 YELNESLKPIRHYYLXXXXXXXXXXXXXXNQGKAK 467
           YE +E+ KPI+HYYL              NQGKAK
Sbjct: 216 YEFDENFKPIKHYYLGNADEIAAKAAAVANQGKAK 250
>sp|Q8R7C8|GPMA_THETN 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
           (Phosphoglyceromutase) (PGAM) (BPG-dependent PGAM)
           (dPGM)
          Length = 249

 Score =  174 bits (441), Expect = 1e-43
 Identities = 82/155 (52%), Positives = 110/155 (70%)
 Frame = +3

Query: 3   QGLNKSETAAKHGEHQVQIWRRAYAIAPPALETNDERWPGLEAKYKHLDLAIVPRTECLK 182
           QGLNK+ETA K+GE QV++WRR+  + PPAL  +D R+PG + +Y  L    +P TE L 
Sbjct: 94  QGLNKAETAKKYGEEQVKLWRRSAEVRPPALTKDDPRYPGNDPRYADLSEDEIPLTENLI 153

Query: 183 DTVERALPFWFDSIVPSIKDNKKVLIAAHGNSLRAVIKFLDKIGDDEIVGLNIPTGIPLV 362
           DT+ R +P+W  +I P+IK  K+V+IAAHGNSLR ++K+LD + ++EI+ LNIPTGIPLV
Sbjct: 154 DTINRVIPYWESTIAPTIKSGKRVIIAAHGNSLRGLVKYLDNLSNEEIMELNIPTGIPLV 213

Query: 363 YELNESLKPIRHYYLXXXXXXXXXXXXXXNQGKAK 467
           YEL+E+LKPIRHYYL               QGKA+
Sbjct: 214 YELDENLKPIRHYYLADEEELKKKQQEVAEQGKAR 248
>sp|O51602|GPMA_BORBU 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
           (Phosphoglyceromutase) (PGAM) (BPG-dependent PGAM)
           (dPGM)
          Length = 248

 Score =  174 bits (441), Expect = 1e-43
 Identities = 79/155 (50%), Positives = 110/155 (70%)
 Frame = +3

Query: 3   QGLNKSETAAKHGEHQVQIWRRAYAIAPPALETNDERWPGLEAKYKHLDLAIVPRTECLK 182
           QGLNKSETAAK+GE +V IWRR+Y + P +L+ +D+R P  + +YKH+    +P TECLK
Sbjct: 94  QGLNKSETAAKYGEDKVLIWRRSYDVPPMSLDESDDRHPIKDPRYKHIPKRELPSTECLK 153

Query: 183 DTVERALPFWFDSIVPSIKDNKKVLIAAHGNSLRAVIKFLDKIGDDEIVGLNIPTGIPLV 362
           DTV R +P+W D I   + + KKV++AAHGNSLRA++K+ D + +++++ LNIPTGIPLV
Sbjct: 154 DTVARVIPYWTDEIAKEVLEGKKVIVAAHGNSLRALVKYFDNLSEEDVLKLNIPTGIPLV 213

Query: 363 YELNESLKPIRHYYLXXXXXXXXXXXXXXNQGKAK 467
           YEL++ L PI+HYYL              +QGK K
Sbjct: 214 YELDKDLNPIKHYYLGDESKIKKAMESVASQGKLK 248
>sp|Q8ZQS2|GPMA_SALTY 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
           (Phosphoglyceromutase) (PGAM) (BPG-dependent PGAM)
           (dPGM)
          Length = 250

 Score =  174 bits (440), Expect = 2e-43
 Identities = 79/155 (50%), Positives = 111/155 (71%)
 Frame = +3

Query: 3   QGLNKSETAAKHGEHQVQIWRRAYAIAPPALETNDERWPGLEAKYKHLDLAIVPRTECLK 182
           QGLNK+ETA K+G+ QV+ WRR +A+ PP L  +DER+PG + +Y  L    +P TE L 
Sbjct: 96  QGLNKAETAEKYGDEQVKQWRRGFAVTPPELTKDDERYPGHDPRYAKLSEKELPLTESLA 155

Query: 183 DTVERALPFWFDSIVPSIKDNKKVLIAAHGNSLRAVIKFLDKIGDDEIVGLNIPTGIPLV 362
            T++R +P+W D+I+P +K  ++V+IAAHGNSLRA++K+LD + +DEI+ LNIPTG+PLV
Sbjct: 156 LTIDRVIPYWNDTILPRMKSGERVIIAAHGNSLRALVKYLDNMSEDEILELNIPTGVPLV 215

Query: 363 YELNESLKPIRHYYLXXXXXXXXXXXXXXNQGKAK 467
           YE +E+ KP++HYYL              NQGKAK
Sbjct: 216 YEFDENFKPLKHYYLGNADEIAAKAAAVANQGKAK 250
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,941,103
Number of Sequences: 369166
Number of extensions: 1116243
Number of successful extensions: 3364
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3263
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3315
length of database: 68,354,980
effective HSP length: 104
effective length of database: 49,142,540
effective search space used: 3931403200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)