Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_020_E06
(555 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q7WQN2|GPMA_BORBR 2,3-bisphosphoglycerate-dependent phos... 187 1e-47
sp|Q7W1Q6|GPMA_BORPA 2,3-bisphosphoglycerate-dependent phos... 187 1e-47
sp|Q8KFC8|GPMA_CHLTE 2,3-bisphosphoglycerate-dependent phos... 186 3e-47
sp|Q8ZGY5|GPMA_YERPE 2,3-bisphosphoglycerate-dependent phos... 181 8e-46
sp|Q8Y2I3|GPMA_RALSO 2,3-bisphosphoglycerate-dependent phos... 177 1e-44
sp|Q82TU0|GPMA2_NITEU 2,3-bisphosphoglycerate-dependent pho... 176 4e-44
sp|Q8Z8B2|GPMA_SALTI 2,3-bisphosphoglycerate-dependent phos... 174 1e-43
sp|Q8R7C8|GPMA_THETN 2,3-bisphosphoglycerate-dependent phos... 174 1e-43
sp|O51602|GPMA_BORBU 2,3-bisphosphoglycerate-dependent phos... 174 1e-43
sp|Q8ZQS2|GPMA_SALTY 2,3-bisphosphoglycerate-dependent phos... 174 2e-43
>sp|Q7WQN2|GPMA_BORBR 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
(Phosphoglyceromutase) (PGAM) (BPG-dependent PGAM)
(dPGM)
sp|Q7VS43|GPMA_BORPE 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
(Phosphoglyceromutase) (PGAM) (BPG-dependent PGAM)
(dPGM)
Length = 250
Score = 187 bits (476), Expect = 1e-47
Identities = 92/155 (59%), Positives = 111/155 (71%)
Frame = +3
Query: 3 QGLNKSETAAKHGEHQVQIWRRAYAIAPPALETNDERWPGLEAKYKHLDLAIVPRTECLK 182
QGLNK+ETAAK+G+ QV IWRRAYAIAP L+ D R P + +Y + +P TECLK
Sbjct: 94 QGLNKAETAAKYGDEQVLIWRRAYAIAPEPLDLEDPRHPRFDGRYAKIPADQLPATECLK 153
Query: 183 DTVERALPFWFDSIVPSIKDNKKVLIAAHGNSLRAVIKFLDKIGDDEIVGLNIPTGIPLV 362
DTV R LPFW +SI P+I+ ++VL+AAHGNSLRA+IK LD + DD+IVG+NIPTG PLV
Sbjct: 154 DTVARVLPFWNESIAPAIRAGRRVLVAAHGNSLRALIKHLDNVSDDDIVGVNIPTGQPLV 213
Query: 363 YELNESLKPIRHYYLXXXXXXXXXXXXXXNQGKAK 467
YEL+E LKPIRHYYL QGKAK
Sbjct: 214 YELDEDLKPIRHYYLGDAAEIEAAMAAVAAQGKAK 248
>sp|Q7W1Q6|GPMA_BORPA 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
(Phosphoglyceromutase) (PGAM) (BPG-dependent PGAM)
(dPGM)
Length = 250
Score = 187 bits (476), Expect = 1e-47
Identities = 92/155 (59%), Positives = 111/155 (71%)
Frame = +3
Query: 3 QGLNKSETAAKHGEHQVQIWRRAYAIAPPALETNDERWPGLEAKYKHLDLAIVPRTECLK 182
QGLNK+ETAAK+G+ QV IWRRAYAIAP L+ D R P + +Y + +P TECLK
Sbjct: 94 QGLNKAETAAKYGDEQVLIWRRAYAIAPEPLDLEDPRHPRFDGRYAKIPADQLPATECLK 153
Query: 183 DTVERALPFWFDSIVPSIKDNKKVLIAAHGNSLRAVIKFLDKIGDDEIVGLNIPTGIPLV 362
DTV R LPFW +SI P+I+ ++VL+AAHGNSLRA+IK LD + DD+IVG+NIPTG PLV
Sbjct: 154 DTVARVLPFWNESIAPAIRAGRRVLVAAHGNSLRALIKHLDNVSDDDIVGVNIPTGQPLV 213
Query: 363 YELNESLKPIRHYYLXXXXXXXXXXXXXXNQGKAK 467
YEL+E LKPIRHYYL QGKAK
Sbjct: 214 YELDEDLKPIRHYYLGDAAEIEAAMAAVAAQGKAK 248
>sp|Q8KFC8|GPMA_CHLTE 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
(Phosphoglyceromutase) (PGAM) (BPG-dependent PGAM)
(dPGM)
Length = 247
Score = 186 bits (472), Expect = 3e-47
Identities = 87/154 (56%), Positives = 109/154 (70%)
Frame = +3
Query: 3 QGLNKSETAAKHGEHQVQIWRRAYAIAPPALETNDERWPGLEAKYKHLDLAIVPRTECLK 182
QGLNK+ETA +HG+ QV IWRR+Y PPAL +DE WPG + +Y L +P TECLK
Sbjct: 94 QGLNKAETAQRHGDEQVLIWRRSYDTPPPALTESDEFWPGKDPRYASLSSQELPATECLK 153
Query: 183 DTVERALPFWFDSIVPSIKDNKKVLIAAHGNSLRAVIKFLDKIGDDEIVGLNIPTGIPLV 362
DTV R LP+W ++I P I+D K V+I AHGNSLRA++K+LD I D++IVGLNIPTGIPLV
Sbjct: 154 DTVARFLPYWHETIAPQIRDGKNVIITAHGNSLRALVKYLDNISDEDIVGLNIPTGIPLV 213
Query: 363 YELNESLKPIRHYYLXXXXXXXXXXXXXXNQGKA 464
YEL++ LKP++ YYL QGKA
Sbjct: 214 YELDDDLKPLKSYYLGDQEELKKKVEVVVKQGKA 247
>sp|Q8ZGY5|GPMA_YERPE 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
(Phosphoglyceromutase) (PGAM) (BPG-dependent PGAM)
(dPGM)
Length = 250
Score = 181 bits (460), Expect = 8e-46
Identities = 87/155 (56%), Positives = 112/155 (72%)
Frame = +3
Query: 3 QGLNKSETAAKHGEHQVQIWRRAYAIAPPALETNDERWPGLEAKYKHLDLAIVPRTECLK 182
QGLNKSETA K+G+ QV+ WRR +AI PPALE +DER+PG + +Y L A +P TE L
Sbjct: 96 QGLNKSETAEKYGDEQVKQWRRGFAITPPALEKSDERFPGHDPRYAKLTDAELPTTESLA 155
Query: 183 DTVERALPFWFDSIVPSIKDNKKVLIAAHGNSLRAVIKFLDKIGDDEIVGLNIPTGIPLV 362
T+ER +P+W D I P I ++V+IAAHGNSLRA++K+LD +G+DEI+ LNIPTG+PLV
Sbjct: 156 LTIERVIPYWNDVIKPRIASGERVIIAAHGNSLRALVKYLDDLGEDEILELNIPTGVPLV 215
Query: 363 YELNESLKPIRHYYLXXXXXXXXXXXXXXNQGKAK 467
YE +E+ KPI+HYYL NQGKAK
Sbjct: 216 YEFDENFKPIKHYYLGNADEIAAKAAAVANQGKAK 250
>sp|Q8Y2I3|GPMA_RALSO 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
(Phosphoglyceromutase) (PGAM) (BPG-dependent PGAM)
(dPGM)
Length = 248
Score = 177 bits (450), Expect = 1e-44
Identities = 89/154 (57%), Positives = 105/154 (68%)
Frame = +3
Query: 6 GLNKSETAAKHGEHQVQIWRRAYAIAPPALETNDERWPGLEAKYKHLDLAIVPRTECLKD 185
GLNK+ETAA++G+ QV +WRR+Y PPALE DER +Y L VP TECLKD
Sbjct: 95 GLNKAETAAQYGDQQVLVWRRSYDTPPPALEAGDERDAYGNPRYAGLpreQVPLTECLKD 154
Query: 186 TVERALPFWFDSIVPSIKDNKKVLIAAHGNSLRAVIKFLDKIGDDEIVGLNIPTGIPLVY 365
TV R LP W SI P IK K+V+IAAHGNS+RA++K+LD I DD+IVGLNIP G PLVY
Sbjct: 155 TVARVLPLWETSIAPDIKSGKRVVIAAHGNSIRALVKYLDNISDDDIVGLNIPNGTPLVY 214
Query: 366 ELNESLKPIRHYYLXXXXXXXXXXXXXXNQGKAK 467
EL+ +LKPIRHYYL QGKAK
Sbjct: 215 ELDANLKPIRHYYLGDQEAIAASLAAVAGQGKAK 248
>sp|Q82TU0|GPMA2_NITEU 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase 2
(Phosphoglyceromutase 2) (PGAM 2) (BPG-dependent PGAM 2)
(dPGM 2)
Length = 249
Score = 176 bits (445), Expect = 4e-44
Identities = 83/154 (53%), Positives = 107/154 (69%)
Frame = +3
Query: 3 QGLNKSETAAKHGEHQVQIWRRAYAIAPPALETNDERWPGLEAKYKHLDLAIVPRTECLK 182
QGLNK+ETA ++G+ QV +WRR+Y I PP++ NDER+PG + +Y+++ +P E LK
Sbjct: 94 QGLNKAETAKQYGDEQVLVWRRSYDIRPPSITINDERYPGFDLRYRNMSSGDIPLAESLK 153
Query: 183 DTVERALPFWFDSIVPSIKDNKKVLIAAHGNSLRAVIKFLDKIGDDEIVGLNIPTGIPLV 362
DTV R LP+W SI P IK KKV+IAAHGNSLRA+IK LD I D +I+ NIPTGIPLV
Sbjct: 154 DTVARFLPYWNQSIAPQIKAEKKVIIAAHGNSLRALIKHLDNISDQDILNCNIPTGIPLV 213
Query: 363 YELNESLKPIRHYYLXXXXXXXXXXXXXXNQGKA 464
YEL++ LKP+ YYL NQGK+
Sbjct: 214 YELDDDLKPLNSYYLGDAGQIGEAISAVANQGKS 247
>sp|Q8Z8B2|GPMA_SALTI 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
(Phosphoglyceromutase) (PGAM) (BPG-dependent PGAM)
(dPGM)
Length = 250
Score = 174 bits (442), Expect = 1e-43
Identities = 80/155 (51%), Positives = 111/155 (71%)
Frame = +3
Query: 3 QGLNKSETAAKHGEHQVQIWRRAYAIAPPALETNDERWPGLEAKYKHLDLAIVPRTECLK 182
QGLNK+ETA K+G+ QV+ WRR +A+ PP L +DER+PG + +Y L +P TE L
Sbjct: 96 QGLNKAETAEKYGDEQVKQWRRGFAVTPPELTKDDERYPGHDPRYAKLSEKELPLTESLA 155
Query: 183 DTVERALPFWFDSIVPSIKDNKKVLIAAHGNSLRAVIKFLDKIGDDEIVGLNIPTGIPLV 362
T++R +P+W D+I+P +K ++V+IAAHGNSLRA++K+LD + +DEI+ LNIPTG+PLV
Sbjct: 156 LTIDRVIPYWNDTILPRMKSGERVIIAAHGNSLRALVKYLDNMSEDEILELNIPTGVPLV 215
Query: 363 YELNESLKPIRHYYLXXXXXXXXXXXXXXNQGKAK 467
YE +E+ KPI+HYYL NQGKAK
Sbjct: 216 YEFDENFKPIKHYYLGNADEIAAKAAAVANQGKAK 250
>sp|Q8R7C8|GPMA_THETN 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
(Phosphoglyceromutase) (PGAM) (BPG-dependent PGAM)
(dPGM)
Length = 249
Score = 174 bits (441), Expect = 1e-43
Identities = 82/155 (52%), Positives = 110/155 (70%)
Frame = +3
Query: 3 QGLNKSETAAKHGEHQVQIWRRAYAIAPPALETNDERWPGLEAKYKHLDLAIVPRTECLK 182
QGLNK+ETA K+GE QV++WRR+ + PPAL +D R+PG + +Y L +P TE L
Sbjct: 94 QGLNKAETAKKYGEEQVKLWRRSAEVRPPALTKDDPRYPGNDPRYADLSEDEIPLTENLI 153
Query: 183 DTVERALPFWFDSIVPSIKDNKKVLIAAHGNSLRAVIKFLDKIGDDEIVGLNIPTGIPLV 362
DT+ R +P+W +I P+IK K+V+IAAHGNSLR ++K+LD + ++EI+ LNIPTGIPLV
Sbjct: 154 DTINRVIPYWESTIAPTIKSGKRVIIAAHGNSLRGLVKYLDNLSNEEIMELNIPTGIPLV 213
Query: 363 YELNESLKPIRHYYLXXXXXXXXXXXXXXNQGKAK 467
YEL+E+LKPIRHYYL QGKA+
Sbjct: 214 YELDENLKPIRHYYLADEEELKKKQQEVAEQGKAR 248
>sp|O51602|GPMA_BORBU 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
(Phosphoglyceromutase) (PGAM) (BPG-dependent PGAM)
(dPGM)
Length = 248
Score = 174 bits (441), Expect = 1e-43
Identities = 79/155 (50%), Positives = 110/155 (70%)
Frame = +3
Query: 3 QGLNKSETAAKHGEHQVQIWRRAYAIAPPALETNDERWPGLEAKYKHLDLAIVPRTECLK 182
QGLNKSETAAK+GE +V IWRR+Y + P +L+ +D+R P + +YKH+ +P TECLK
Sbjct: 94 QGLNKSETAAKYGEDKVLIWRRSYDVPPMSLDESDDRHPIKDPRYKHIPKRELPSTECLK 153
Query: 183 DTVERALPFWFDSIVPSIKDNKKVLIAAHGNSLRAVIKFLDKIGDDEIVGLNIPTGIPLV 362
DTV R +P+W D I + + KKV++AAHGNSLRA++K+ D + +++++ LNIPTGIPLV
Sbjct: 154 DTVARVIPYWTDEIAKEVLEGKKVIVAAHGNSLRALVKYFDNLSEEDVLKLNIPTGIPLV 213
Query: 363 YELNESLKPIRHYYLXXXXXXXXXXXXXXNQGKAK 467
YEL++ L PI+HYYL +QGK K
Sbjct: 214 YELDKDLNPIKHYYLGDESKIKKAMESVASQGKLK 248
>sp|Q8ZQS2|GPMA_SALTY 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase
(Phosphoglyceromutase) (PGAM) (BPG-dependent PGAM)
(dPGM)
Length = 250
Score = 174 bits (440), Expect = 2e-43
Identities = 79/155 (50%), Positives = 111/155 (71%)
Frame = +3
Query: 3 QGLNKSETAAKHGEHQVQIWRRAYAIAPPALETNDERWPGLEAKYKHLDLAIVPRTECLK 182
QGLNK+ETA K+G+ QV+ WRR +A+ PP L +DER+PG + +Y L +P TE L
Sbjct: 96 QGLNKAETAEKYGDEQVKQWRRGFAVTPPELTKDDERYPGHDPRYAKLSEKELPLTESLA 155
Query: 183 DTVERALPFWFDSIVPSIKDNKKVLIAAHGNSLRAVIKFLDKIGDDEIVGLNIPTGIPLV 362
T++R +P+W D+I+P +K ++V+IAAHGNSLRA++K+LD + +DEI+ LNIPTG+PLV
Sbjct: 156 LTIDRVIPYWNDTILPRMKSGERVIIAAHGNSLRALVKYLDNMSEDEILELNIPTGVPLV 215
Query: 363 YELNESLKPIRHYYLXXXXXXXXXXXXXXNQGKAK 467
YE +E+ KP++HYYL NQGKAK
Sbjct: 216 YEFDENFKPLKHYYLGNADEIAAKAAAVANQGKAK 250
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,941,103
Number of Sequences: 369166
Number of extensions: 1116243
Number of successful extensions: 3364
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3263
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3315
length of database: 68,354,980
effective HSP length: 104
effective length of database: 49,142,540
effective search space used: 3931403200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)