Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= DrC_02436
(250 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|O70551|SRPK1_MOUSE Serine/threonine-protein kinase SRPK1... 68 6e-12
sp|Q96SB4|SRPK1_HUMAN Serine/threonine-protein kinase SRPK1... 68 6e-12
sp|Q5RD27|SRPK1_PONPY Serine/threonine-protein kinase SRPK1... 68 6e-12
sp|O54781|SRPK2_MOUSE Serine/threonine-protein kinase SRPK2... 67 1e-11
sp|P78362|SRPK2_HUMAN Serine/threonine-protein kinase SRPK2... 67 1e-11
sp|Q9UPE1|STK23_HUMAN Serine/threonine-protein kinase 23 (M... 65 6e-11
sp|Q9Z0G2|STK23_MOUSE Serine/threonine-protein kinase 23 (M... 64 8e-11
sp|Q03563|SPK1_CAEEL Serine/threonine-protein kinase spk-1 61 9e-10
sp|Q61IS6|SPK1_CAEBR Serine/threonine-protein kinase spk-1 59 3e-09
sp|P36616|DSK1_SCHPO Protein kinase dsk1 (Dis1-suppressing ... 43 3e-04
>sp|O70551|SRPK1_MOUSE Serine/threonine-protein kinase SRPK1 (Serine/arginine-rich
protein-specific kinase 1) (SR-protein-specific kinase
1) (SFRS protein kinase 1)
Length = 648
Score = 68.2 bits (165), Expect = 6e-12
Identities = 34/80 (42%), Positives = 52/80 (65%)
Frame = +2
Query: 11 RHTLMGLSYMHNVCQMIHTDIKLENIILTADEDYIRSLAADAILSWKSGVDLPLAAVCNM 190
+ L GL Y+H C++IHTDIK ENI+L+ +E YIR LAA+A +SG P + +
Sbjct: 194 QQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVST 253
Query: 191 PPKLIQDRSKLNKNQKKRMK 250
P+ + K++KN+KK++K
Sbjct: 254 APQ-PKPADKMSKNKKKKLK 272
>sp|Q96SB4|SRPK1_HUMAN Serine/threonine-protein kinase SRPK1 (Serine/arginine-rich
protein-specific kinase 1) (SR-protein-specific kinase
1) (SFRS protein kinase 1)
Length = 826
Score = 68.2 bits (165), Expect = 6e-12
Identities = 34/80 (42%), Positives = 52/80 (65%)
Frame = +2
Query: 11 RHTLMGLSYMHNVCQMIHTDIKLENIILTADEDYIRSLAADAILSWKSGVDLPLAAVCNM 190
+ L GL Y+H C++IHTDIK ENI+L+ +E YIR LAA+A +SG P + +
Sbjct: 365 QQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVST 424
Query: 191 PPKLIQDRSKLNKNQKKRMK 250
P+ + K++KN+KK++K
Sbjct: 425 APQ-PKPADKMSKNKKKKLK 443
>sp|Q5RD27|SRPK1_PONPY Serine/threonine-protein kinase SRPK1 (Serine/arginine-rich
protein-specific kinase 1) (SR-protein-specific kinase
1) (SFRS protein kinase 1)
Length = 655
Score = 68.2 bits (165), Expect = 6e-12
Identities = 34/80 (42%), Positives = 52/80 (65%)
Frame = +2
Query: 11 RHTLMGLSYMHNVCQMIHTDIKLENIILTADEDYIRSLAADAILSWKSGVDLPLAAVCNM 190
+ L GL Y+H C++IHTDIK ENI+L+ +E YIR LAA+A +SG P + +
Sbjct: 194 QQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVST 253
Query: 191 PPKLIQDRSKLNKNQKKRMK 250
P+ + K++KN+KK++K
Sbjct: 254 APQ-PKPADKMSKNKKKKLK 272
>sp|O54781|SRPK2_MOUSE Serine/threonine-protein kinase SRPK2 (Serine/arginine-rich
protein-specific kinase 2) (SR-protein-specific kinase
2) (SFRS protein kinase 2)
Length = 681
Score = 67.0 bits (162), Expect = 1e-11
Identities = 32/80 (40%), Positives = 52/80 (65%)
Frame = +2
Query: 11 RHTLMGLSYMHNVCQMIHTDIKLENIILTADEDYIRSLAADAILSWKSGVDLPLAAVCNM 190
R L GL Y+H+ C++IHTDIK ENI++ D+ Y+R +AA+A K+G P + +
Sbjct: 193 RQVLQGLDYLHSKCKIIHTDIKPENILMCVDDAYVRRMAAEATEWQKAGAPPPSGSAVST 252
Query: 191 PPKLIQDRSKLNKNQKKRMK 250
P+ + K++KN+KK++K
Sbjct: 253 APQQ-KPIGKISKNKKKKLK 271
>sp|P78362|SRPK2_HUMAN Serine/threonine-protein kinase SRPK2 (Serine/arginine-rich
protein-specific kinase 2) (SR-protein-specific kinase
2) (SFRS protein kinase 2)
Length = 688
Score = 67.0 bits (162), Expect = 1e-11
Identities = 32/80 (40%), Positives = 52/80 (65%)
Frame = +2
Query: 11 RHTLMGLSYMHNVCQMIHTDIKLENIILTADEDYIRSLAADAILSWKSGVDLPLAAVCNM 190
R L GL Y+H+ C++IHTDIK ENI++ D+ Y+R +AA+A K+G P + +
Sbjct: 195 RQVLQGLDYLHSKCKIIHTDIKPENILMCVDDAYVRRMAAEATEWQKAGAPPPSGSAVST 254
Query: 191 PPKLIQDRSKLNKNQKKRMK 250
P+ + K++KN+KK++K
Sbjct: 255 APQQ-KPIGKISKNKKKKLK 273
>sp|Q9UPE1|STK23_HUMAN Serine/threonine-protein kinase 23 (Muscle-specific serine kinase
1) (MSSK-1)
Length = 533
Score = 64.7 bits (156), Expect = 6e-11
Identities = 33/80 (41%), Positives = 51/80 (63%)
Frame = +2
Query: 11 RHTLMGLSYMHNVCQMIHTDIKLENIILTADEDYIRSLAADAILSWKSGVDLPLAAVCNM 190
R L GL Y+H C++IHTDIK ENI+L + YIR LAA+A ++G P ++ +
Sbjct: 193 RQVLHGLDYLHTKCKIIHTDIKPENILLCVGDAYIRRLAAEATEWQQAGAPPPSRSIVST 252
Query: 191 PPKLIQDRSKLNKNQKKRMK 250
P+ + KL+KN++K+M+
Sbjct: 253 APQEVL-TGKLSKNKRKKMR 271
>sp|Q9Z0G2|STK23_MOUSE Serine/threonine-protein kinase 23 (Muscle-specific serine kinase
1) (MSSK-1)
Length = 565
Score = 64.3 bits (155), Expect = 8e-11
Identities = 34/80 (42%), Positives = 50/80 (62%)
Frame = +2
Query: 11 RHTLMGLSYMHNVCQMIHTDIKLENIILTADEDYIRSLAADAILSWKSGVDLPLAAVCNM 190
R L GL Y+H C++IHTDIK ENI+L + YIR LAA+A +SG P + +
Sbjct: 192 RQVLHGLDYLHTKCKIIHTDIKPENILLCVGDAYIRRLAAEATEWQQSGAQPPSRSTVST 251
Query: 191 PPKLIQDRSKLNKNQKKRMK 250
P+ + KL+KN++K+M+
Sbjct: 252 APQEVL-IGKLSKNKRKKMR 270
>sp|Q03563|SPK1_CAEEL Serine/threonine-protein kinase spk-1
Length = 1003
Score = 60.8 bits (146), Expect = 9e-10
Identities = 30/81 (37%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Frame = +2
Query: 11 RHTLMGLSYMHNVCQMIHTDIKLENIILTADEDYIRSLAADAILSWKSGVDLPLAAVCNM 190
R L L YMH C +IHTDIK EN+++T + I+ +A A+++ K + + +AV
Sbjct: 536 RQVLEALGYMHEKCGIIHTDIKPENVLITMSREEIKIMAQHAVVARKMNMKMSGSAVSTA 595
Query: 191 PPKLIQ-DRSKLNKNQKKRMK 250
P L++ + + KN+KK+MK
Sbjct: 596 PDHLVKMAQENMTKNKKKKMK 616
>sp|Q61IS6|SPK1_CAEBR Serine/threonine-protein kinase spk-1
Length = 771
Score = 58.9 bits (141), Expect = 3e-09
Identities = 29/81 (35%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
Frame = +2
Query: 11 RHTLMGLSYMHNVCQMIHTDIKLENIILTADEDYIRSLAADAILSWKSGVDLPLAAVCNM 190
+ L L YMH C +IHTDIK EN+++T + I+ +A A+++ K + + +AV
Sbjct: 248 KQILEALRYMHEKCGIIHTDIKPENVLITMSREEIKIMAQHAVVARKMNMKMSGSAVSTA 307
Query: 191 PPKLIQ-DRSKLNKNQKKRMK 250
P L++ + + KN+KK+MK
Sbjct: 308 PDHLVKMAQENMTKNKKKKMK 328
>sp|P36616|DSK1_SCHPO Protein kinase dsk1 (Dis1-suppressing protein kinase)
Length = 544
Score = 42.7 bits (99), Expect = 3e-04
Identities = 17/42 (40%), Positives = 28/42 (66%)
Frame = +2
Query: 20 LMGLSYMHNVCQMIHTDIKLENIILTADEDYIRSLAADAILS 145
L+ L Y+H C +IHTD+K EN+++ D+D ++ + A A S
Sbjct: 198 LIALDYLHRECGIIHTDLKPENVLICIDQDALQHIEAPATTS 239
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,706,906
Number of Sequences: 369166
Number of extensions: 466325
Number of successful extensions: 1673
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1651
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1671
length of database: 68,354,980
effective HSP length: 53
effective length of database: 58,564,025
effective search space used: 1698356725
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)