Planaria EST Database


DrC_02436

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_02436
         (250 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|O70551|SRPK1_MOUSE  Serine/threonine-protein kinase SRPK1...    68   6e-12
sp|Q96SB4|SRPK1_HUMAN  Serine/threonine-protein kinase SRPK1...    68   6e-12
sp|Q5RD27|SRPK1_PONPY  Serine/threonine-protein kinase SRPK1...    68   6e-12
sp|O54781|SRPK2_MOUSE  Serine/threonine-protein kinase SRPK2...    67   1e-11
sp|P78362|SRPK2_HUMAN  Serine/threonine-protein kinase SRPK2...    67   1e-11
sp|Q9UPE1|STK23_HUMAN  Serine/threonine-protein kinase 23 (M...    65   6e-11
sp|Q9Z0G2|STK23_MOUSE  Serine/threonine-protein kinase 23 (M...    64   8e-11
sp|Q03563|SPK1_CAEEL  Serine/threonine-protein kinase spk-1        61   9e-10
sp|Q61IS6|SPK1_CAEBR  Serine/threonine-protein kinase spk-1        59   3e-09
sp|P36616|DSK1_SCHPO  Protein kinase dsk1 (Dis1-suppressing ...    43   3e-04
>sp|O70551|SRPK1_MOUSE Serine/threonine-protein kinase SRPK1 (Serine/arginine-rich
           protein-specific kinase 1) (SR-protein-specific kinase
           1) (SFRS protein kinase 1)
          Length = 648

 Score = 68.2 bits (165), Expect = 6e-12
 Identities = 34/80 (42%), Positives = 52/80 (65%)
 Frame = +2

Query: 11  RHTLMGLSYMHNVCQMIHTDIKLENIILTADEDYIRSLAADAILSWKSGVDLPLAAVCNM 190
           +  L GL Y+H  C++IHTDIK ENI+L+ +E YIR LAA+A    +SG   P  +  + 
Sbjct: 194 QQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVST 253

Query: 191 PPKLIQDRSKLNKNQKKRMK 250
            P+  +   K++KN+KK++K
Sbjct: 254 APQ-PKPADKMSKNKKKKLK 272
>sp|Q96SB4|SRPK1_HUMAN Serine/threonine-protein kinase SRPK1 (Serine/arginine-rich
           protein-specific kinase 1) (SR-protein-specific kinase
           1) (SFRS protein kinase 1)
          Length = 826

 Score = 68.2 bits (165), Expect = 6e-12
 Identities = 34/80 (42%), Positives = 52/80 (65%)
 Frame = +2

Query: 11  RHTLMGLSYMHNVCQMIHTDIKLENIILTADEDYIRSLAADAILSWKSGVDLPLAAVCNM 190
           +  L GL Y+H  C++IHTDIK ENI+L+ +E YIR LAA+A    +SG   P  +  + 
Sbjct: 365 QQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVST 424

Query: 191 PPKLIQDRSKLNKNQKKRMK 250
            P+  +   K++KN+KK++K
Sbjct: 425 APQ-PKPADKMSKNKKKKLK 443
>sp|Q5RD27|SRPK1_PONPY Serine/threonine-protein kinase SRPK1 (Serine/arginine-rich
           protein-specific kinase 1) (SR-protein-specific kinase
           1) (SFRS protein kinase 1)
          Length = 655

 Score = 68.2 bits (165), Expect = 6e-12
 Identities = 34/80 (42%), Positives = 52/80 (65%)
 Frame = +2

Query: 11  RHTLMGLSYMHNVCQMIHTDIKLENIILTADEDYIRSLAADAILSWKSGVDLPLAAVCNM 190
           +  L GL Y+H  C++IHTDIK ENI+L+ +E YIR LAA+A    +SG   P  +  + 
Sbjct: 194 QQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPPPSGSAVST 253

Query: 191 PPKLIQDRSKLNKNQKKRMK 250
            P+  +   K++KN+KK++K
Sbjct: 254 APQ-PKPADKMSKNKKKKLK 272
>sp|O54781|SRPK2_MOUSE Serine/threonine-protein kinase SRPK2 (Serine/arginine-rich
           protein-specific kinase 2) (SR-protein-specific kinase
           2) (SFRS protein kinase 2)
          Length = 681

 Score = 67.0 bits (162), Expect = 1e-11
 Identities = 32/80 (40%), Positives = 52/80 (65%)
 Frame = +2

Query: 11  RHTLMGLSYMHNVCQMIHTDIKLENIILTADEDYIRSLAADAILSWKSGVDLPLAAVCNM 190
           R  L GL Y+H+ C++IHTDIK ENI++  D+ Y+R +AA+A    K+G   P  +  + 
Sbjct: 193 RQVLQGLDYLHSKCKIIHTDIKPENILMCVDDAYVRRMAAEATEWQKAGAPPPSGSAVST 252

Query: 191 PPKLIQDRSKLNKNQKKRMK 250
            P+  +   K++KN+KK++K
Sbjct: 253 APQQ-KPIGKISKNKKKKLK 271
>sp|P78362|SRPK2_HUMAN Serine/threonine-protein kinase SRPK2 (Serine/arginine-rich
           protein-specific kinase 2) (SR-protein-specific kinase
           2) (SFRS protein kinase 2)
          Length = 688

 Score = 67.0 bits (162), Expect = 1e-11
 Identities = 32/80 (40%), Positives = 52/80 (65%)
 Frame = +2

Query: 11  RHTLMGLSYMHNVCQMIHTDIKLENIILTADEDYIRSLAADAILSWKSGVDLPLAAVCNM 190
           R  L GL Y+H+ C++IHTDIK ENI++  D+ Y+R +AA+A    K+G   P  +  + 
Sbjct: 195 RQVLQGLDYLHSKCKIIHTDIKPENILMCVDDAYVRRMAAEATEWQKAGAPPPSGSAVST 254

Query: 191 PPKLIQDRSKLNKNQKKRMK 250
            P+  +   K++KN+KK++K
Sbjct: 255 APQQ-KPIGKISKNKKKKLK 273
>sp|Q9UPE1|STK23_HUMAN Serine/threonine-protein kinase 23 (Muscle-specific serine kinase
           1) (MSSK-1)
          Length = 533

 Score = 64.7 bits (156), Expect = 6e-11
 Identities = 33/80 (41%), Positives = 51/80 (63%)
 Frame = +2

Query: 11  RHTLMGLSYMHNVCQMIHTDIKLENIILTADEDYIRSLAADAILSWKSGVDLPLAAVCNM 190
           R  L GL Y+H  C++IHTDIK ENI+L   + YIR LAA+A    ++G   P  ++ + 
Sbjct: 193 RQVLHGLDYLHTKCKIIHTDIKPENILLCVGDAYIRRLAAEATEWQQAGAPPPSRSIVST 252

Query: 191 PPKLIQDRSKLNKNQKKRMK 250
            P+ +    KL+KN++K+M+
Sbjct: 253 APQEVL-TGKLSKNKRKKMR 271
>sp|Q9Z0G2|STK23_MOUSE Serine/threonine-protein kinase 23 (Muscle-specific serine kinase
           1) (MSSK-1)
          Length = 565

 Score = 64.3 bits (155), Expect = 8e-11
 Identities = 34/80 (42%), Positives = 50/80 (62%)
 Frame = +2

Query: 11  RHTLMGLSYMHNVCQMIHTDIKLENIILTADEDYIRSLAADAILSWKSGVDLPLAAVCNM 190
           R  L GL Y+H  C++IHTDIK ENI+L   + YIR LAA+A    +SG   P  +  + 
Sbjct: 192 RQVLHGLDYLHTKCKIIHTDIKPENILLCVGDAYIRRLAAEATEWQQSGAQPPSRSTVST 251

Query: 191 PPKLIQDRSKLNKNQKKRMK 250
            P+ +    KL+KN++K+M+
Sbjct: 252 APQEVL-IGKLSKNKRKKMR 270
>sp|Q03563|SPK1_CAEEL Serine/threonine-protein kinase spk-1
          Length = 1003

 Score = 60.8 bits (146), Expect = 9e-10
 Identities = 30/81 (37%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
 Frame = +2

Query: 11  RHTLMGLSYMHNVCQMIHTDIKLENIILTADEDYIRSLAADAILSWKSGVDLPLAAVCNM 190
           R  L  L YMH  C +IHTDIK EN+++T   + I+ +A  A+++ K  + +  +AV   
Sbjct: 536 RQVLEALGYMHEKCGIIHTDIKPENVLITMSREEIKIMAQHAVVARKMNMKMSGSAVSTA 595

Query: 191 PPKLIQ-DRSKLNKNQKKRMK 250
           P  L++  +  + KN+KK+MK
Sbjct: 596 PDHLVKMAQENMTKNKKKKMK 616
>sp|Q61IS6|SPK1_CAEBR Serine/threonine-protein kinase spk-1
          Length = 771

 Score = 58.9 bits (141), Expect = 3e-09
 Identities = 29/81 (35%), Positives = 49/81 (60%), Gaps = 1/81 (1%)
 Frame = +2

Query: 11  RHTLMGLSYMHNVCQMIHTDIKLENIILTADEDYIRSLAADAILSWKSGVDLPLAAVCNM 190
           +  L  L YMH  C +IHTDIK EN+++T   + I+ +A  A+++ K  + +  +AV   
Sbjct: 248 KQILEALRYMHEKCGIIHTDIKPENVLITMSREEIKIMAQHAVVARKMNMKMSGSAVSTA 307

Query: 191 PPKLIQ-DRSKLNKNQKKRMK 250
           P  L++  +  + KN+KK+MK
Sbjct: 308 PDHLVKMAQENMTKNKKKKMK 328
>sp|P36616|DSK1_SCHPO Protein kinase dsk1 (Dis1-suppressing protein kinase)
          Length = 544

 Score = 42.7 bits (99), Expect = 3e-04
 Identities = 17/42 (40%), Positives = 28/42 (66%)
 Frame = +2

Query: 20  LMGLSYMHNVCQMIHTDIKLENIILTADEDYIRSLAADAILS 145
           L+ L Y+H  C +IHTD+K EN+++  D+D ++ + A A  S
Sbjct: 198 LIALDYLHRECGIIHTDLKPENVLICIDQDALQHIEAPATTS 239
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,706,906
Number of Sequences: 369166
Number of extensions: 466325
Number of successful extensions: 1673
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1651
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1671
length of database: 68,354,980
effective HSP length: 53
effective length of database: 58,564,025
effective search space used: 1698356725
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)