Planaria EST Database


DrC_02412

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_02412
         (612 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P14088|CYPH_ECHGR  Peptidyl-prolyl cis-trans isomerase (P...   227   2e-59
sp|P91791|CYPH_HEMPU  Peptidyl-prolyl cis-trans isomerase (P...   222   7e-58
sp|P18253|CYPH_SCHPO  Peptidyl-prolyl cis-trans isomerase (P...   221   9e-58
sp|P30405|PPIF_HUMAN  Peptidyl-prolyl cis-trans isomerase, m...   218   1e-56
sp|P22011|CYPH_CANAL  Peptidyl-prolyl cis-trans isomerase (P...   218   1e-56
sp|Q99KR7|PPIF_MOUSE  Peptidyl-prolyl cis-trans isomerase, m...   214   1e-55
sp|P29117|PPIF_RAT  Peptidyl-prolyl cis-trans isomerase, mit...   214   1e-55
sp|P17742|PPIA_MOUSE  Peptidyl-prolyl cis-trans isomerase A ...   214   1e-55
sp|P10111|PPIA_RAT  Peptidyl-prolyl cis-trans isomerase A (P...   214   2e-55
sp|P14851|PPIA_CRIGR  Peptidyl-prolyl cis-trans isomerase A ...   213   3e-55
>sp|P14088|CYPH_ECHGR Peptidyl-prolyl cis-trans isomerase (PPIase) (Rotamase)
           (Cyclophilin) (Cyclosporin A-binding protein) (EGCyP-1)
          Length = 162

 Score =  227 bits (579), Expect = 2e-59
 Identities = 113/160 (70%), Positives = 123/160 (76%)
 Frame = +3

Query: 6   KTYFDIVANKKKLGRIVFVLYADDVPKTVENFRALCTGEKGFGYKGSKFHRVIPNFMLQX 185
           K +FDI    K  GRIVF L+ DDVPKTVENFRALCTGEKGFGYKGSKFHR+IP FM Q 
Sbjct: 4   KCFFDISIGGKPAGRIVFALF-DDVPKTVENFRALCTGEKGFGYKGSKFHRIIPGFMCQG 62

Query: 186 XXXXXXXXXXXXSIYGEKFGDENFKYKHTKPGLLSMANAGPNTNGSQFFITTVVTNWLDG 365
                       SIYG KF DENF +KH+KP +LSMANAG NTNGSQFFITT VT+WLDG
Sbjct: 63  GDFTAGNGTGGKSIYGSKFEDENFNHKHSKPMMLSMANAGKNTNGSQFFITTAVTSWLDG 122

Query: 366 KHVVFGEVEEGMDIVKQIEKMGSDSGKPSQEVLIEDCGQL 485
           KHVVFGEVE G D+VK +E +GS SGK SQEVLI DCGQL
Sbjct: 123 KHVVFGEVESGEDVVKDMEAVGSSSGKTSQEVLITDCGQL 162
>sp|P91791|CYPH_HEMPU Peptidyl-prolyl cis-trans isomerase (PPIase) (Rotamase)
           (Cyclophilin) (Cyclosporin A-binding protein)
          Length = 164

 Score =  222 bits (565), Expect = 7e-58
 Identities = 107/160 (66%), Positives = 122/160 (76%)
 Frame = +3

Query: 6   KTYFDIVANKKKLGRIVFVLYADDVPKTVENFRALCTGEKGFGYKGSKFHRVIPNFMLQX 185
           + +FD+ AN + LGRIV  L AD VPKT ENFRALCTGEKGFGYKGS FHRVIP FM Q 
Sbjct: 5   QVFFDLQANGENLGRIVMELRADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPGFMCQG 64

Query: 186 XXXXXXXXXXXXSIYGEKFGDENFKYKHTKPGLLSMANAGPNTNGSQFFITTVVTNWLDG 365
                       SIYGEKF DENF  KHT+PG+LSMANAG NTNGSQFFI T VT+WLDG
Sbjct: 65  GDFTRHNGTGGKSIYGEKFADENFTLKHTQPGILSMANAGVNTNGSQFFICTAVTSWLDG 124

Query: 366 KHVVFGEVEEGMDIVKQIEKMGSDSGKPSQEVLIEDCGQL 485
           KHVVFG V +G+DI+K++E  GSDSGK S+++ I DCGQL
Sbjct: 125 KHVVFGAVTQGLDIIKKVESYGSDSGKTSKKITIADCGQL 164
>sp|P18253|CYPH_SCHPO Peptidyl-prolyl cis-trans isomerase (PPIase) (Rotamase)
           (Cyclophilin) (Cyclosporin A-binding protein) (CPH)
          Length = 162

 Score =  221 bits (564), Expect = 9e-58
 Identities = 106/156 (67%), Positives = 120/156 (76%)
 Frame = +3

Query: 12  YFDIVANKKKLGRIVFVLYADDVPKTVENFRALCTGEKGFGYKGSKFHRVIPNFMLQXXX 191
           +FD++AN + LGRIVF L+ D VPKT  NFRALCTGEKG+GY GS FHRVIP FMLQ   
Sbjct: 5   FFDVIANGQPLGRIVFKLFDDVVPKTAANFRALCTGEKGYGYAGSTFHRVIPQFMLQGGD 64

Query: 192 XXXXXXXXXXSIYGEKFGDENFKYKHTKPGLLSMANAGPNTNGSQFFITTVVTNWLDGKH 371
                     SIYGEKF DENF  KH KPGLLSMANAGPNTNGSQFFITTVVT WLDGKH
Sbjct: 65  FTRGNGTGGKSIYGEKFPDENFALKHNKPGLLSMANAGPNTNGSQFFITTVVTPWLDGKH 124

Query: 372 VVFGEVEEGMDIVKQIEKMGSDSGKPSQEVLIEDCG 479
           VVFGEV EGMD+VK++E +GS+SG     ++I+ CG
Sbjct: 125 VVFGEVTEGMDVVKKVESLGSNSGATRARIVIDKCG 160
>sp|P30405|PPIF_HUMAN Peptidyl-prolyl cis-trans isomerase, mitochondrial precursor
           (PPIase) (Rotamase) (Cyclophilin F)
          Length = 207

 Score =  218 bits (555), Expect = 1e-56
 Identities = 105/158 (66%), Positives = 120/158 (75%)
 Frame = +3

Query: 12  YFDIVANKKKLGRIVFVLYADDVPKTVENFRALCTGEKGFGYKGSKFHRVIPNFMLQXXX 191
           Y D+ AN K LGR+V  L AD VPKT ENFRALCTGEKGFGYKGS FHRVIP+FM Q   
Sbjct: 49  YLDVDANGKPLGRVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSFMCQAGD 108

Query: 192 XXXXXXXXXXSIYGEKFGDENFKYKHTKPGLLSMANAGPNTNGSQFFITTVVTNWLDGKH 371
                     SIYG +F DENF  KH  PG+LSMANAGPNTNGSQFFI T+ T+WLDGKH
Sbjct: 109 FTNHNGTGGKSIYGSRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKH 168

Query: 372 VVFGEVEEGMDIVKQIEKMGSDSGKPSQEVLIEDCGQL 485
           VVFG V+EGMD+VK+IE  GS SG+ S++++I DCGQL
Sbjct: 169 VVFGHVKEGMDVVKKIESFGSKSGRTSKKIVITDCGQL 206
>sp|P22011|CYPH_CANAL Peptidyl-prolyl cis-trans isomerase (PPIase) (Rotamase)
           (Cyclophilin) (Cyclosporin A-binding protein) (CPH)
          Length = 162

 Score =  218 bits (554), Expect = 1e-56
 Identities = 107/158 (67%), Positives = 121/158 (76%)
 Frame = +3

Query: 12  YFDIVANKKKLGRIVFVLYADDVPKTVENFRALCTGEKGFGYKGSKFHRVIPNFMLQXXX 191
           YFD+ A+ +KLG+I F LY D VPKT ENFRALCTGEKGFGYKGS FHRVIP FMLQ   
Sbjct: 5   YFDVSADGQKLGKITFKLYDDVVPKTAENFRALCTGEKGFGYKGSIFHRVIPQFMLQGGD 64

Query: 192 XXXXXXXXXXSIYGEKFGDENFKYKHTKPGLLSMANAGPNTNGSQFFITTVVTNWLDGKH 371
                     SIYG KF DENF  +H +PGLLSMANAGPNTNGSQFFITTV   WLDGKH
Sbjct: 65  FTNFNGTGGKSIYGTKFADENFVKRHDRPGLLSMANAGPNTNGSQFFITTVPCPWLDGKH 124

Query: 372 VVFGEVEEGMDIVKQIEKMGSDSGKPSQEVLIEDCGQL 485
           VVFGEV +G+DIVK+IE  GS SG  S++++IE+ GQL
Sbjct: 125 VVFGEVTDGLDIVKKIESFGSGSGATSKKIVIEESGQL 162
>sp|Q99KR7|PPIF_MOUSE Peptidyl-prolyl cis-trans isomerase, mitochondrial precursor
           (PPIase) (Rotamase) (Cyclophilin F)
          Length = 206

 Score =  214 bits (546), Expect = 1e-55
 Identities = 104/158 (65%), Positives = 119/158 (75%)
 Frame = +3

Query: 12  YFDIVANKKKLGRIVFVLYADDVPKTVENFRALCTGEKGFGYKGSKFHRVIPNFMLQXXX 191
           Y D+ A+ + LGR+V  L AD VPKT ENFRALCTGEKGFGYKGS FHRVIP FM Q   
Sbjct: 48  YLDVGADGQPLGRVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPAFMCQAGD 107

Query: 192 XXXXXXXXXXSIYGEKFGDENFKYKHTKPGLLSMANAGPNTNGSQFFITTVVTNWLDGKH 371
                     SIYG +F DENF  KH  PG+LSMANAGPNTNGSQFFI T+ T+WLDGKH
Sbjct: 108 FTNHNGTGGRSIYGSRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKH 167

Query: 372 VVFGEVEEGMDIVKQIEKMGSDSGKPSQEVLIEDCGQL 485
           VVFG V+EGMD+VK+IE  GS SGK S++++I DCGQL
Sbjct: 168 VVFGHVKEGMDVVKKIESFGSKSGKTSKKIVITDCGQL 205
>sp|P29117|PPIF_RAT Peptidyl-prolyl cis-trans isomerase, mitochondrial precursor
           (PPIase) (Rotamase) (Cyclophilin F)
          Length = 206

 Score =  214 bits (546), Expect = 1e-55
 Identities = 104/158 (65%), Positives = 119/158 (75%)
 Frame = +3

Query: 12  YFDIVANKKKLGRIVFVLYADDVPKTVENFRALCTGEKGFGYKGSKFHRVIPNFMLQXXX 191
           Y D+ A+ + LGR+V  L AD VPKT ENFRALCTGEKGFGYKGS FHRVIP FM Q   
Sbjct: 48  YLDVGADGQPLGRVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPAFMCQAGD 107

Query: 192 XXXXXXXXXXSIYGEKFGDENFKYKHTKPGLLSMANAGPNTNGSQFFITTVVTNWLDGKH 371
                     SIYG +F DENF  KH  PG+LSMANAGPNTNGSQFFI T+ T+WLDGKH
Sbjct: 108 FTNHNGTGGKSIYGSRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKH 167

Query: 372 VVFGEVEEGMDIVKQIEKMGSDSGKPSQEVLIEDCGQL 485
           VVFG V+EGMD+VK+IE  GS SGK S++++I DCGQL
Sbjct: 168 VVFGHVKEGMDVVKKIESFGSKSGKTSKKIVITDCGQL 205
>sp|P17742|PPIA_MOUSE Peptidyl-prolyl cis-trans isomerase A (PPIase) (Rotamase)
           (Cyclophilin A) (Cyclosporin A-binding protein) (SP18)
          Length = 164

 Score =  214 bits (545), Expect = 1e-55
 Identities = 103/158 (65%), Positives = 120/158 (75%)
 Frame = +3

Query: 12  YFDIVANKKKLGRIVFVLYADDVPKTVENFRALCTGEKGFGYKGSKFHRVIPNFMLQXXX 191
           +FDI A+ + LGR+ F L+AD VPKT ENFRAL TGEKGFGYKGS FHR+IP FM Q   
Sbjct: 7   FFDITADDEPLGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSSFHRIIPGFMCQGGD 66

Query: 192 XXXXXXXXXXSIYGEKFGDENFKYKHTKPGLLSMANAGPNTNGSQFFITTVVTNWLDGKH 371
                     SIYGEKF DENF  KHT PG+LSMANAGPNTNGSQFFI T  T WLDGKH
Sbjct: 67  FTRHNGTGGRSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKH 126

Query: 372 VVFGEVEEGMDIVKQIEKMGSDSGKPSQEVLIEDCGQL 485
           VVFG+V+EGM+IV+ +E+ GS +GK S+++ I DCGQL
Sbjct: 127 VVFGKVKEGMNIVEAMERFGSRNGKTSKKITISDCGQL 164
>sp|P10111|PPIA_RAT Peptidyl-prolyl cis-trans isomerase A (PPIase) (Rotamase)
           (Cyclophilin A) (Cyclosporin A-binding protein) (P31)
           (p1B15)
          Length = 164

 Score =  214 bits (544), Expect = 2e-55
 Identities = 103/158 (65%), Positives = 119/158 (75%)
 Frame = +3

Query: 12  YFDIVANKKKLGRIVFVLYADDVPKTVENFRALCTGEKGFGYKGSKFHRVIPNFMLQXXX 191
           +FDI A+ + LGR+ F L+AD VPKT ENFRAL TGEKGFGYKGS FHR+IP FM Q   
Sbjct: 7   FFDITADGEPLGRVCFELFADKVPKTAENFRALSTGEKGFGYKGSSFHRIIPGFMCQGGD 66

Query: 192 XXXXXXXXXXSIYGEKFGDENFKYKHTKPGLLSMANAGPNTNGSQFFITTVVTNWLDGKH 371
                     SIYGEKF DENF  KHT PG+LSMANAGPNTNGSQFFI T  T WLDGKH
Sbjct: 67  FTRHNGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKH 126

Query: 372 VVFGEVEEGMDIVKQIEKMGSDSGKPSQEVLIEDCGQL 485
           VVFG+V+EGM IV+ +E+ GS +GK S+++ I DCGQL
Sbjct: 127 VVFGKVKEGMSIVEAMERFGSRNGKTSKKITISDCGQL 164
>sp|P14851|PPIA_CRIGR Peptidyl-prolyl cis-trans isomerase A (PPIase) (Rotamase)
           (Cyclophilin A) (Cyclosporin A-binding protein)
          Length = 164

 Score =  213 bits (542), Expect = 3e-55
 Identities = 103/158 (65%), Positives = 120/158 (75%)
 Frame = +3

Query: 12  YFDIVANKKKLGRIVFVLYADDVPKTVENFRALCTGEKGFGYKGSKFHRVIPNFMLQXXX 191
           +FDI A+ + LGR+ F L+AD VPKT ENFRAL TGEKGFGYKGS FHR+IP FM Q   
Sbjct: 7   FFDISADGEPLGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSSFHRIIPGFMCQGGD 66

Query: 192 XXXXXXXXXXSIYGEKFGDENFKYKHTKPGLLSMANAGPNTNGSQFFITTVVTNWLDGKH 371
                     SIYGEKF DENF  KHT PG+LSMANAGPNTNGSQFFI T  T WLDGKH
Sbjct: 67  FTRHNGTGGRSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKH 126

Query: 372 VVFGEVEEGMDIVKQIEKMGSDSGKPSQEVLIEDCGQL 485
           VVFG+V+EGM+IV+ +E+ GS +GK S+++ I DCGQL
Sbjct: 127 VVFGKVKEGMNIVEAMERFGSRNGKTSKKITISDCGQL 164
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,078,902
Number of Sequences: 369166
Number of extensions: 1652639
Number of successful extensions: 4566
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4348
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4455
length of database: 68,354,980
effective HSP length: 105
effective length of database: 48,957,805
effective search space used: 4797864890
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)