Planaria EST Database


DrC_02299

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_02299
         (709 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9WUE4|TUSC4_MOUSE  Tumor suppressor candidate 4 (NPR2-li...    86   1e-16
sp|Q8WTW4|TUSC4_HUMAN  Tumor suppressor candidate 4 (NPR2-li...    85   2e-16
sp|Q63226|GRID2_RAT  Glutamate receptor delta-2 subunit prec...    37   0.067
sp|O43424|GRID2_HUMAN  Glutamate receptor delta-2 subunit pr...    36   0.088
sp|P39923|NPR2_YEAST  Nitrogen permease regulator 2                35   0.15 
sp|Q8Y4R7|G6PI_LISMO  Glucose-6-phosphate isomerase (GPI) (P...    33   0.97 
sp|Q9ZCZ8|IF2_RICPR  Translation initiation factor IF-2            32   1.7  
sp|Q7VJ31|PROB_HELHP  Glutamate 5-kinase (Gamma-glutamyl kin...    32   2.2  
sp|O67699|YI45_AQUAE  Hypothetical protein AQ_1845                 32   2.2  
sp|Q9H9C1|CN133_HUMAN  Protein C14orf133                           31   2.8  
>sp|Q9WUE4|TUSC4_MOUSE Tumor suppressor candidate 4 (NPR2-like) (Gene 21 protein) (G21
           protein)
          Length = 380

 Score = 85.9 bits (211), Expect = 1e-16
 Identities = 60/226 (26%), Positives = 108/226 (47%), Gaps = 4/226 (1%)
 Frame = +1

Query: 19  EPNVAVECEQVPVLNNDRRII---PLDLTSQRLLPLLNGESSVWDIAQKSQVDVKVVRAC 189
           +P VA E + VPV   D+        DLT+Q++LP ++G   V  I+ ++ V++ +VR  
Sbjct: 165 DPPVAQEYD-VPVFTKDKEDFFSSQWDLTTQQILPYIDGFRHVQKISAEADVELNLVRIA 223

Query: 190 VQNLGYVGAIKTVAPFRLGSIYMCMPKLIRSWRDSELRRKLLEYVLNEEKNSLEIEKLEN 369
           +QNL Y G +  V+  +  ++Y   PK+     D  L+   L YV  +      +  +  
Sbjct: 224 IQNLLYYGVVTLVSILQYSNVYCPTPKVQDLVDDKSLQEACLSYVTKQGHKRASLRDV-- 281

Query: 370 IAETALRALAILGPQTKVSDCNTILSSTNQKFNCRQLIQFAEMEGLIRKVNGHPINIADI 549
                 +    L P T V D         Q  + R+LIQF  M+ LIR++  +P+ ++  
Sbjct: 282 -----FQLYCSLSPGTTVRDLIGRHPQQLQHVDERKLIQFGLMKNLIRRLQKYPVRVS-- 334

Query: 550 VTDKHTIPSQLLDGTHNLEEIACMLDTPFPQLESEI-NKSDAFVIW 684
             ++ + P++L  G H+ +EI C     + +L+  + N  +  + W
Sbjct: 335 -REERSHPARLYTGCHSYDEICCKTGMSYHELDERLENDPNIIICW 379
>sp|Q8WTW4|TUSC4_HUMAN Tumor suppressor candidate 4 (NPR2-like) (Gene 21 protein) (G21
           protein)
          Length = 380

 Score = 85.1 bits (209), Expect = 2e-16
 Identities = 59/226 (26%), Positives = 107/226 (47%), Gaps = 4/226 (1%)
 Frame = +1

Query: 19  EPNVAVECEQVPVLNNDRRII---PLDLTSQRLLPLLNGESSVWDIAQKSQVDVKVVRAC 189
           +P VA E + VPV   D+        DLT+Q++LP ++G   +  I+ ++ V++ +VR  
Sbjct: 165 DPPVAQEYD-VPVFTKDKEDFFNSQWDLTTQQILPYIDGFRHIQKISAEADVELNLVRIA 223

Query: 190 VQNLGYVGAIKTVAPFRLGSIYMCMPKLIRSWRDSELRRKLLEYVLNEEKNSLEIEKLEN 369
           +QNL Y G +  V+  +  ++Y   PK+     D  L+   L YV  +      +  +  
Sbjct: 224 IQNLLYYGVVTLVSILQYSNVYCPTPKVQDLVDDKSLQEACLSYVTKQGHKRASLRDV-- 281

Query: 370 IAETALRALAILGPQTKVSDCNTILSSTNQKFNCRQLIQFAEMEGLIRKVNGHPINIADI 549
                 +    L P T V D         Q  + R+LIQF  M+ LIR++  +P+    +
Sbjct: 282 -----FQLYCSLSPGTTVRDLIGRHPQQLQHVDERKLIQFGLMKNLIRRLQKYPVR---V 333

Query: 550 VTDKHTIPSQLLDGTHNLEEIACMLDTPFPQLESEI-NKSDAFVIW 684
             ++ + P++L  G H+ +EI C     + +L+  + N  +  + W
Sbjct: 334 TREEQSHPARLYTGCHSYDEICCKTGMSYHELDERLENDPNIIICW 379
>sp|Q63226|GRID2_RAT Glutamate receptor delta-2 subunit precursor (GluR delta-2)
          Length = 1007

 Score = 36.6 bits (83), Expect = 0.067
 Identities = 23/106 (21%), Positives = 44/106 (41%), Gaps = 5/106 (4%)
 Frame = +1

Query: 340 NSLEIEKLENIAETALRALAILGPQTKVSDCNTILSSTNQKFNCRQLI-----QFAEMEG 504
           +++ IE+L    +T  RA+ ++ P T  S  + ++ +    F+C  +I        +++ 
Sbjct: 213 DTMRIEELNRYRDTLRRAILVMNPATAKSFISEVVETNLVAFDCHWIIINEEINDVDVQE 272

Query: 505 LIRKVNGHPINIADIVTDKHTIPSQLLDGTHNLEEIACMLDTPFPQ 642
           L+R+  G    I         I  +   G H +    C    PF Q
Sbjct: 273 LVRRSIGRLTIIRQTFPVPQNISQRCFRGNHRISSTLCDPKDPFAQ 318
>sp|O43424|GRID2_HUMAN Glutamate receptor delta-2 subunit precursor (GluR delta-2)
          Length = 1007

 Score = 36.2 bits (82), Expect = 0.088
 Identities = 23/106 (21%), Positives = 43/106 (40%), Gaps = 5/106 (4%)
 Frame = +1

Query: 340 NSLEIEKLENIAETALRALAILGPQTKVSDCNTILSSTNQKFNCRQLI-----QFAEMEG 504
           +++ IE+L    +T  RA+ ++ P T  S    ++ +    F+C  +I        +++ 
Sbjct: 213 DTMRIEELNRYRDTLRRAILVMNPATAKSFITEVVETNLVAFDCHWIIINEEINDVDVQE 272

Query: 505 LIRKVNGHPINIADIVTDKHTIPSQLLDGTHNLEEIACMLDTPFPQ 642
           L+R+  G    I         I  +   G H +    C    PF Q
Sbjct: 273 LVRRSIGRLTIIRQTFPIPQNISQRCFRGNHRISSTLCDPKDPFAQ 318
>sp|P39923|NPR2_YEAST Nitrogen permease regulator 2
          Length = 624

 Score = 35.4 bits (80), Expect = 0.15
 Identities = 23/81 (28%), Positives = 43/81 (53%), Gaps = 3/81 (3%)
 Frame = +1

Query: 22  PNVAVECEQVPVLN-NDRRIIPL--DLTSQRLLPLLNGESSVWDIAQKSQVDVKVVRACV 192
           P   V  E VP+ + N ++II +  D T   ++P ++G +S+  I++ S  D  +V  C+
Sbjct: 244 PTTCVSLEDVPLSSVNLKKIIDVNWDPTMMSIVPYIDGLNSIAKISKLSNSDPGLVIECI 303

Query: 193 QNLGYVGAIKTVAPFRLGSIY 255
           ++L Y   +     F+  +IY
Sbjct: 304 RHLIYYKCVTLSDIFQFSNIY 324
>sp|Q8Y4R7|G6PI_LISMO Glucose-6-phosphate isomerase (GPI) (Phosphoglucose isomerase)
           (PGI) (Phosphohexose isomerase) (PHI)
          Length = 450

 Score = 32.7 bits (73), Expect = 0.97
 Identities = 34/105 (32%), Positives = 44/105 (41%)
 Frame = +1

Query: 355 EKLENIAETALRALAILGPQTKVSDCNTILSSTNQKFNCRQLIQFAEMEGLIRKVNGHPI 534
           E   NIA     A  +L  + KV++         Q FN      F E EG  +K  G   
Sbjct: 244 ELKNNIAYQYAAARNVLYRKGKVTELLISYEPGLQYFNEWWKQLFGESEGKDKK--GIYP 301

Query: 535 NIADIVTDKHTIPSQLLDGTHNLEEIACMLDTPFPQLESEINKSD 669
           + A+  TD H+I   + DG  NL E    +D P   L   INK D
Sbjct: 302 SSANFSTDLHSIGQYIQDGRRNLFETVIKVDKPRHNL--TINKED 344
>sp|Q9ZCZ8|IF2_RICPR Translation initiation factor IF-2
          Length = 831

 Score = 32.0 bits (71), Expect = 1.7
 Identities = 31/97 (31%), Positives = 48/97 (49%), Gaps = 11/97 (11%)
 Frame = +1

Query: 325 LNEEKNSLEIEKLENIAETALRALAIL---GPQTKVSDCNTI-----LSSTNQKFNCR-- 474
           LN+E+NSL+   +++  E   R L+IL     Q+K+ D   I     L+S NQ  N +  
Sbjct: 58  LNKERNSLDQSVIDSNKEEFNRRLSILKKAAEQSKLHDPAQISTLSKLASINQSINSKNE 117

Query: 475 QLIQFAEMEGLIRKVNGHPINI-ADIVTDKHTIPSQL 582
           Q I    +E   + +  + + I A IV D   I SQ+
Sbjct: 118 QSITDKAVEQKHQNIEDNKVEIAAKIVQDNENISSQI 154
>sp|Q7VJ31|PROB_HELHP Glutamate 5-kinase (Gamma-glutamyl kinase) (GK)
          Length = 264

 Score = 31.6 bits (70), Expect = 2.2
 Identities = 17/46 (36%), Positives = 27/46 (58%)
 Frame = +1

Query: 463 FNCRQLIQFAEMEGLIRKVNGHPINIADIVTDKHTIPSQLLDGTHN 600
           F  + LI  ++++G   K N H  + A I+   H+IPSQ L+ TH+
Sbjct: 155 FGAKLLIILSDIDGYFDK-NPHQYDDAQILPIVHSIPSQALEQTHS 199
>sp|O67699|YI45_AQUAE Hypothetical protein AQ_1845
          Length = 230

 Score = 31.6 bits (70), Expect = 2.2
 Identities = 16/41 (39%), Positives = 27/41 (65%)
 Frame = +1

Query: 100 QRLLPLLNGESSVWDIAQKSQVDVKVVRACVQNLGYVGAIK 222
           +++L L+NGE++V DI +KS +D   V   +  L  +GAI+
Sbjct: 163 RKVLELVNGENTVKDILEKSGLDKLTVYRTLYGLLAIGAIR 203
>sp|Q9H9C1|CN133_HUMAN Protein C14orf133
          Length = 493

 Score = 31.2 bits (69), Expect = 2.8
 Identities = 22/88 (25%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
 Frame = +1

Query: 124 GESSVWDIAQKSQVDVKVVRACVQNLGYVGAIKTV-APFRLGSIYMCMPKLIRSWRDSEL 300
           G   V +I  K+   V++++       YV  ++ V     L + + C   +I ++RD + 
Sbjct: 406 GFHRVVEILHKNNAPVQILQE------YVNLVEDVDTKLNLATKFKCHDVVIDTYRDLKD 459

Query: 301 RRKLLEYVLNEEKNSLEIEKLENIAETA 384
           R++LL Y    +K S E EK++ +  ++
Sbjct: 460 RQQLLAYRSKVDKGSAEEEKIDALLSSS 487
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 82,860,633
Number of Sequences: 369166
Number of extensions: 1621760
Number of successful extensions: 4141
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 4045
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4136
length of database: 68,354,980
effective HSP length: 107
effective length of database: 48,588,335
effective search space used: 6219306880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)