Planaria EST Database


DrC_02268

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_02268
         (882 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q7TP47|HNRPQ_RAT  Heterogeneous nuclear ribonucleoprotein...   238   2e-62
sp|Q7TMK9|HNRPQ_MOUSE  Heterogeneous nuclear ribonucleoprote...   238   2e-62
sp|O60506|HNRPQ_HUMAN  Heterogeneous nuclear ribonucleoprote...   235   1e-61
sp|O43390|HNRPR_HUMAN  Heterogeneous nuclear ribonucleoprote...   233   7e-61
sp|Q6VY05|DND1_MOUSE  Dead end protein homolog 1 (RNA-bindin...   120   7e-27
sp|Q8IYX4|DND1_HUMAN  Dead end protein homolog 1 (RNA-bindin...   115   2e-25
sp|Q6DCB7|DND1_XENLA  Dead end protein homolog 1                  115   2e-25
sp|Q7T1H5|DND1_BRARE  Dead end protein 1                          114   4e-25
sp|Q05196|PABP5_ARATH  Polyadenylate-binding protein 5 (Poly...    58   3e-08
sp|P20397|NUCL_XENLA  Nucleolin (Protein C23)                      56   1e-07
>sp|Q7TP47|HNRPQ_RAT Heterogeneous nuclear ribonucleoprotein Q (hnRNP Q) (hnRNP-Q)
           (Synaptotagmin binding, cytoplasmic RNA interacting
           protein) (Liver regeneration-related protein LRRG077)
          Length = 533

 Score =  238 bits (606), Expect = 2e-62
 Identities = 124/282 (43%), Positives = 181/282 (64%), Gaps = 4/282 (1%)
 Frame = +2

Query: 41  GQRRCG--PPEN-WSDPLPGKGCEIFIAKIPKDYFEKELIPILREIGEIYTFRLMMETET 211
           GQR+ G  PP++ +S   P  G EIF+ KIP+D FE EL+P+  + G I+  RLMM+  T
Sbjct: 50  GQRKYGGPPPDSVYSGQQPSVGTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLT 109

Query: 212 N-HRGFGFCLYTTHETAKRAVLKLNNFQIKKNWYLGVCFSVDNCRLFVGGIPKLKTKLEI 388
             +RG+ F  + T E A+ AV   NN +I+   ++GVC SV N RLFVG IPK KTK +I
Sbjct: 110 GLNRGYAFVTFCTKEAAQEAVKLYNNHEIRSGKHIGVCISVANNRLFVGSIPKSKTKEQI 169

Query: 389 HDEMSNFTDNVVDIIVYPSAADKHKNRGFAFVEYTNHKAAAIARKKMISNGIQLWGQTVA 568
            +E S  T+ + D+I+Y    DK KNRGF F+EY +HK AA AR++++S  +++WG    
Sbjct: 170 LEEFSKVTEGLTDVILYHQPDDKKKNRGFCFLEYEDHKTAAQARRRLMSGKVKVWGNVGT 229

Query: 569 VDWAEPERKVEDEIMSKVKILYVRNLMLTTTENIIYLEFSQHIDDPQEIVKVKKIDDFAF 748
           V+WA+P    + E+M+KVK+L+VRNL  T TE I+   FSQ      ++ +VKK+ D+AF
Sbjct: 230 VEWADPIEDPDPEVMAKVKVLFVRNLANTVTEEILEKSFSQF----GKLERVKKLKDYAF 285

Query: 749 VHFKSREQAEIVKNKTHGISLEGSTIEVHFAKPVNKIDQQQK 874
           +HF  R+ A     + +G  LEG  IE+ FAKP ++  +++K
Sbjct: 286 IHFDERDGAVKAMEEMNGKDLEGENIEIVFAKPPDQKRKERK 327
>sp|Q7TMK9|HNRPQ_MOUSE Heterogeneous nuclear ribonucleoprotein Q (hnRNP Q) (hnRNP-Q)
           (Synaptotagmin binding, cytoplasmic RNA interacting
           protein) (Glycine-and tyrosine-rich RNA binding protein)
           (GRY-RBP) (NS1-associated protein 1) (pp68)
          Length = 623

 Score =  238 bits (606), Expect = 2e-62
 Identities = 124/282 (43%), Positives = 181/282 (64%), Gaps = 4/282 (1%)
 Frame = +2

Query: 41  GQRRCG--PPEN-WSDPLPGKGCEIFIAKIPKDYFEKELIPILREIGEIYTFRLMMETET 211
           GQR+ G  PP++ +S   P  G EIF+ KIP+D FE EL+P+  + G I+  RLMM+  T
Sbjct: 140 GQRKYGGPPPDSVYSGQQPSVGTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLT 199

Query: 212 N-HRGFGFCLYTTHETAKRAVLKLNNFQIKKNWYLGVCFSVDNCRLFVGGIPKLKTKLEI 388
             +RG+ F  + T E A+ AV   NN +I+   ++GVC SV N RLFVG IPK KTK +I
Sbjct: 200 GLNRGYAFVTFCTKEAAQEAVKLYNNHEIRSGKHIGVCISVANNRLFVGSIPKSKTKEQI 259

Query: 389 HDEMSNFTDNVVDIIVYPSAADKHKNRGFAFVEYTNHKAAAIARKKMISNGIQLWGQTVA 568
            +E S  T+ + D+I+Y    DK KNRGF F+EY +HK AA AR++++S  +++WG    
Sbjct: 260 LEEFSKVTEGLTDVILYHQPDDKKKNRGFCFLEYEDHKTAAQARRRLMSGKVKVWGNVGT 319

Query: 569 VDWAEPERKVEDEIMSKVKILYVRNLMLTTTENIIYLEFSQHIDDPQEIVKVKKIDDFAF 748
           V+WA+P    + E+M+KVK+L+VRNL  T TE I+   FSQ      ++ +VKK+ D+AF
Sbjct: 320 VEWADPIEDPDPEVMAKVKVLFVRNLANTVTEEILEKSFSQF----GKLERVKKLKDYAF 375

Query: 749 VHFKSREQAEIVKNKTHGISLEGSTIEVHFAKPVNKIDQQQK 874
           +HF  R+ A     + +G  LEG  IE+ FAKP ++  +++K
Sbjct: 376 IHFDERDGAVKAMEEMNGKDLEGENIEIVFAKPPDQKRKERK 417
>sp|O60506|HNRPQ_HUMAN Heterogeneous nuclear ribonucleoprotein Q (hnRNP Q) (hnRNP-Q)
           (Synaptotagmin binding, cytoplasmic RNA interacting
           protein) (Glycine-and tyrosine-rich RNA binding protein)
           (GRY-RBP) (NS1-associated protein 1)
          Length = 623

 Score =  235 bits (599), Expect = 1e-61
 Identities = 123/282 (43%), Positives = 180/282 (63%), Gaps = 4/282 (1%)
 Frame = +2

Query: 41  GQRRCG--PPEN-WSDPLPGKGCEIFIAKIPKDYFEKELIPILREIGEIYTFRLMMETET 211
           GQR+ G  PP++ +S   P  G EIF+ KIP+D FE EL+P+  + G I+  RLMM+  T
Sbjct: 140 GQRKYGGPPPDSVYSGQQPSVGTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLT 199

Query: 212 N-HRGFGFCLYTTHETAKRAVLKLNNFQIKKNWYLGVCFSVDNCRLFVGGIPKLKTKLEI 388
             +RG+ F  + T E A+ AV   NN +I+   ++GVC SV N RLFVG IPK KTK +I
Sbjct: 200 GLNRGYAFVTFCTKEAAQEAVKLYNNHEIRSGKHIGVCISVANNRLFVGSIPKSKTKEQI 259

Query: 389 HDEMSNFTDNVVDIIVYPSAADKHKNRGFAFVEYTNHKAAAIARKKMISNGIQLWGQTVA 568
            +E S  T+ + D+I+Y    DK KNR F F+EY +HK AA AR++++S  +++WG    
Sbjct: 260 LEEFSKVTEGLTDVILYHQPDDKKKNRSFCFLEYEDHKTAAQARRRLMSGKVKVWGNVGT 319

Query: 569 VDWAEPERKVEDEIMSKVKILYVRNLMLTTTENIIYLEFSQHIDDPQEIVKVKKIDDFAF 748
           V+WA+P    + E+M+KVK+L+VRNL  T TE I+   FSQ      ++ +VKK+ D+AF
Sbjct: 320 VEWADPIEDPDPEVMAKVKVLFVRNLANTVTEEILEKAFSQF----GKLERVKKLKDYAF 375

Query: 749 VHFKSREQAEIVKNKTHGISLEGSTIEVHFAKPVNKIDQQQK 874
           +HF  R+ A     + +G  LEG  IE+ FAKP ++  +++K
Sbjct: 376 IHFDERDGAVKAMEEMNGKDLEGENIEIVFAKPPDQKRKERK 417
>sp|O43390|HNRPR_HUMAN Heterogeneous nuclear ribonucleoprotein R (hnRNP R)
          Length = 633

 Score =  233 bits (593), Expect = 7e-61
 Identities = 120/276 (43%), Positives = 181/276 (65%), Gaps = 4/276 (1%)
 Frame = +2

Query: 41  GQRRCG--PPEN-WSDPLPGKGCEIFIAKIPKDYFEKELIPILREIGEIYTFRLMMETET 211
           GQR+ G  PP++ +S   PG G E+F+ KIP+D +E EL+P+  + G I+  RLMM+  +
Sbjct: 143 GQRKYGGPPPDSVYSGVQPGIGTEVFVGKIPRDLYEDELVPLFEKAGPIWDLRLMMDPLS 202

Query: 212 N-HRGFGFCLYTTHETAKRAVLKLNNFQIKKNWYLGVCFSVDNCRLFVGGIPKLKTKLEI 388
             +RG+ F  +   E A+ AV   ++++I+   +LGVC SV N RLFVG IPK KTK  I
Sbjct: 203 GQNRGYAFITFCGKEAAQEAVKLCDSYEIRPGKHLGVCISVANNRLFVGSIPKNKTKENI 262

Query: 389 HDEMSNFTDNVVDIIVYPSAADKHKNRGFAFVEYTNHKAAAIARKKMISNGIQLWGQTVA 568
            +E S  T+ +VD+I+Y    DK KNRGF F+EY +HK+AA AR++++S  +++WG  V 
Sbjct: 263 LEEFSKVTEGLVDVILYHQPDDKKKNRGFCFLEYEDHKSAAQARRRLMSGKVKVWGNVVT 322

Query: 569 VDWAEPERKVEDEIMSKVKILYVRNLMLTTTENIIYLEFSQHIDDPQEIVKVKKIDDFAF 748
           V+WA+P  + + E+M+KVK+L+VRNL  T TE I+   FS+      ++ +VKK+ D+AF
Sbjct: 323 VEWADPVEEPDPEVMAKVKVLFVRNLATTVTEEILEKSFSEF----GKLERVKKLKDYAF 378

Query: 749 VHFKSREQAEIVKNKTHGISLEGSTIEVHFAKPVNK 856
           VHF+ R  A    ++ +G  +EG  IE+  AKP +K
Sbjct: 379 VHFEDRGAAVKAMDEMNGKEIEGEEIEIVLAKPPDK 414
>sp|Q6VY05|DND1_MOUSE Dead end protein homolog 1 (RNA-binding motif, single-stranded
           interacting protein 4)
          Length = 352

 Score =  120 bits (300), Expect = 7e-27
 Identities = 60/186 (32%), Positives = 105/186 (56%), Gaps = 1/186 (0%)
 Frame = +2

Query: 41  GQRRCG-PPENWSDPLPGKGCEIFIAKIPKDYFEKELIPILREIGEIYTFRLMMETETNH 217
           GQR+ G PP  W    P  G E++I ++P+D +E +LIP+ + +G +Y FRLMM     +
Sbjct: 38  GQRKYGGPPPGWVGSPPPSGSEVYIGRLPQDVYEHQLIPLFQRVGRLYEFRLMMTFSGLN 97

Query: 218 RGFGFCLYTTHETAKRAVLKLNNFQIKKNWYLGVCFSVDNCRLFVGGIPKLKTKLEIHDE 397
           RGF +  Y++   A+ A+  L+N Q++ +  L VC S + C L V G+P    +  +   
Sbjct: 98  RGFAYARYSSRRGAQAAIATLHNHQLRPSCQLLVCRSTEKCELTVDGLPLSLNRRALLLA 157

Query: 398 MSNFTDNVVDIIVYPSAADKHKNRGFAFVEYTNHKAAAIARKKMISNGIQLWGQTVAVDW 577
           +  F   + + ++ PS          A ++++ H+AAA+A+K ++    +L G+ VAV+W
Sbjct: 158 LQPFGPCLQETLLLPSPGSAPSQ--IALLKFSTHRAAAMAKKALVEGQSRLCGEQVAVEW 215

Query: 578 AEPERK 595
            +P+ K
Sbjct: 216 LKPDLK 221
>sp|Q8IYX4|DND1_HUMAN Dead end protein homolog 1 (RNA-binding motif, single-stranded
           interacting protein 4)
          Length = 353

 Score =  115 bits (288), Expect = 2e-25
 Identities = 60/186 (32%), Positives = 103/186 (55%), Gaps = 1/186 (0%)
 Frame = +2

Query: 41  GQRRCG-PPENWSDPLPGKGCEIFIAKIPKDYFEKELIPILREIGEIYTFRLMMETETNH 217
           GQR+ G PP  W    P  G E+FI ++P+D +E +LIP+ + +G +Y FRLMM     +
Sbjct: 38  GQRKYGGPPPGWVGSPPPAGSEVFIGRLPQDVYEHQLIPLFQRVGRLYEFRLMMTFSGLN 97

Query: 218 RGFGFCLYTTHETAKRAVLKLNNFQIKKNWYLGVCFSVDNCRLFVGGIPKLKTKLEIHDE 397
           RGF +  Y++   A+ A+  L+N  ++ +  L VC S + C L V G+P   T+  +   
Sbjct: 98  RGFAYARYSSRRGAQAAIATLHNHPLRPSCPLLVCRSTEKCELSVDGLPPNLTRSALLLA 157

Query: 398 MSNFTDNVVDIIVYPSAADKHKNRGFAFVEYTNHKAAAIARKKMISNGIQLWGQTVAVDW 577
           +      + +  + PS          A +++++H+AAA+A+K ++     L G+ VAV+W
Sbjct: 158 LQPLGPGLQEARLLPSPGPAPGQ--IALLKFSSHRAAAMAKKALVEGQSHLCGEQVAVEW 215

Query: 578 AEPERK 595
            +P+ K
Sbjct: 216 LKPDLK 221
>sp|Q6DCB7|DND1_XENLA Dead end protein homolog 1
          Length = 371

 Score =  115 bits (288), Expect = 2e-25
 Identities = 71/255 (27%), Positives = 127/255 (49%), Gaps = 16/255 (6%)
 Frame = +2

Query: 41  GQRRCG-PPENWSDPLPGKGCEIFIAKIPKDYFEKELIPILREIGEIYTFRLMMETETNH 217
           GQR+ G PP  W    P  G E+FI KIP+D +E +LIP+ + +G++Y FRLMM     +
Sbjct: 57  GQRKYGGPPPGWIGNAPVSGSEVFIGKIPQDIYEDKLIPLFQSVGKLYEFRLMMTFSGLN 116

Query: 218 RGFGFCLYTTHETAKRAVLKLNNFQIKKNWYLGVCFSVDNCRLFVGGIPKLKTKLEIHDE 397
           RGF +  Y +   A  A++ LN F+I K   + VC S +   L + G+P    +  + + 
Sbjct: 117 RGFAYARYISRRQAISAIMSLNGFEITKGCCIVVCRSTEKSELALDGLPGNFDENMLKNV 176

Query: 398 MSNFTDNVVDIIVYPSAADKHKNRGFAFVEYTNHKAAAIARKKMISNGIQLWGQTVAVDW 577
           +   T  V  I ++PS     +++  A V+Y +H+AAA+A+K +      L G  + V+W
Sbjct: 177 LDEVTSGVSSISLHPSPT--KESQVLAVVKYDSHRAAAMAKKTLCEGSPILPGLPLTVNW 234

Query: 578 AEPERK---------VEDEIMSKVKILYV------RNLMLTTTENIIYLEFSQHIDDPQE 712
            + + +          + + +S + +LY       +  +L+    +  L     +  P  
Sbjct: 235 LKTDMRQKLRSTDKLQQTKDLSPLPLLYTDRPDLPKETLLSAVGCLNMLCQEMKLGRPVF 294

Query: 713 IVKVKKIDDFAFVHF 757
           ++K+  +  F ++ F
Sbjct: 295 LIKLFSVTSFGWIRF 309
>sp|Q7T1H5|DND1_BRARE Dead end protein 1
          Length = 411

 Score =  114 bits (285), Expect = 4e-25
 Identities = 65/191 (34%), Positives = 101/191 (52%), Gaps = 3/191 (1%)
 Frame = +2

Query: 41  GQRRCG-PPENWSDPLPGKGCEIFIAKIPKDYFEKELIPILREIGEIYTFRLMMETETNH 217
           GQR+ G PP  W  P PG GCE+FI++IP D +E  LIP+ + IG IY FRLMM      
Sbjct: 40  GQRKYGGPPPGWQGPAPGSGCEVFISQIPNDVYEDRLIPLFQSIGTIYEFRLMMNFSGQT 99

Query: 218 RGFGFCLYTTHETAKRAVLKLNNFQIKKNWYLGVCFSVDNCRLFVGGIPKLKTKLEIHDE 397
           RGF +  Y    TA  AV  L+ +++ +   L V  S +  +L +G +P    + ++   
Sbjct: 100 RGFAYAKYGDPLTASAAVTTLHQYRLPEGGCLTVRRSTEKRQLRLGDLPVSMNESKLLMV 159

Query: 398 MSNFTDNVVDIIVYPSAADKHKNRGFAFVEYTNHKAAAIARKKMISNGIQLWGQTVAVDW 577
           +   +D V D+++ P           A V YT+H AA++A+K ++      +G ++ V W
Sbjct: 160 LQMLSDGVEDVLLKPPG--PKGKEVVALVNYTSHYAASMAKKVLVEAFRNRYGISITVRW 217

Query: 578 A--EPERKVED 604
                 ++VED
Sbjct: 218 TSFSKSKRVED 228
>sp|Q05196|PABP5_ARATH Polyadenylate-binding protein 5 (Poly(A)-binding protein 5) (PABP
           5)
          Length = 668

 Score = 58.2 bits (139), Expect = 3e-08
 Identities = 67/272 (24%), Positives = 113/272 (41%), Gaps = 29/272 (10%)
 Frame = +2

Query: 74  SDPLPGKGCEIFIAKIPKDYFEKELIPILREIGEIYTFRLMMETETNHRGFGFCLYTTHE 253
           S  L GKG  +FI  +      K L       G I + ++ M+     +G+GF  +   E
Sbjct: 125 STRLSGKG-NVFIKNLDASIDNKALYETFSSFGTILSCKVAMDVVGRSKGYGFVQFEKEE 183

Query: 254 TAKRAVLKLNNFQIK-KNWYLG-VCFSVDNCR-----------LFVGGIPKLKTKLEIHD 394
           TA+ A+ KLN   +  K  ++G      D  R           ++V  +PK  T  E+  
Sbjct: 184 TAQAAIDKLNGMLLNDKQVFVGHFVRRQDRARSESGAVPSFTNVYVKNLPKEITDDELKK 243

Query: 395 EMSNFTDNVVDIIVYPSAADKHKNRGFAFVEYTNHKAAAIARKKMISNGIQLWGQTVAVD 574
               + D    +++   + +   +R F FV + + +AAA+A +KM  NGI L    + V 
Sbjct: 244 TFGKYGDISSAVVMKDQSGN---SRSFGFVNFVSPEAAAVAVEKM--NGISLGEDVLYVG 298

Query: 575 WA--------EPERKVEDEIMSKVKILYVRNLMLTTTENIIYLEFSQHIDDPQEIVKVKK 730
            A        E  RK E E +S+ + L   NL L   ++ +  E  + +      V   K
Sbjct: 299 RAQKKSDREEELRRKFEQERISRFEKLQGSNLYLKNLDDSVNDEKLKEMFSEYGNVTSCK 358

Query: 731 I--------DDFAFVHFKSREQAEIVKNKTHG 802
           +          F FV + + E+A +   + +G
Sbjct: 359 VMMNSQGLSRGFGFVAYSNPEEALLAMKEMNG 390

 Score = 47.0 bits (110), Expect = 7e-05
 Identities = 55/272 (20%), Positives = 114/272 (41%), Gaps = 14/272 (5%)
 Frame = +2

Query: 104 IFIAKIPKDYFEKELIPILREIGEIYTFRLMMETETNHRGFGFCLYTTHETAKRAVLKLN 283
           +++  +     E  L+ +  ++  ++  R+  +      G+ +  +   E A RA+  LN
Sbjct: 47  LYVGDLDPSVNESHLLDLFNQVAPVHNLRVCRDLTHRSLGYAYVNFANPEDASRAMESLN 106

Query: 284 NFQIKKNWYLGVCFSVDNC-------RLFVGGIPKLKTKLEIHDEMSNFTDNVVDIIVYP 442
              I+      +  + D          +F+  +        +++  S+F      I+   
Sbjct: 107 YAPIRDRPIRIMLSNRDPSTRLSGKGNVFIKNLDASIDNKALYETFSSFGT----ILSCK 162

Query: 443 SAADK-HKNRGFAFVEYTNHKAAAIARKKMISNGIQLWGQTVAVDW---AEPERKVEDEI 610
            A D   +++G+ FV++   + A  A  K+  NG+ L  + V V      +   + E   
Sbjct: 163 VAMDVVGRSKGYGFVQFEKEETAQAAIDKL--NGMLLNDKQVFVGHFVRRQDRARSESGA 220

Query: 611 MSKVKILYVRNLMLTTTENIIYLEFSQHIDDPQEIVKVKKIDD---FAFVHFKSREQAEI 781
           +     +YV+NL    T++ +   F ++ D    +V   +  +   F FV+F S E A +
Sbjct: 221 VPSFTNVYVKNLPKEITDDELKKTFGKYGDISSAVVMKDQSGNSRSFGFVNFVSPEAAAV 280

Query: 782 VKNKTHGISLEGSTIEVHFAKPVNKIDQQQKL 877
              K +GISL    + V  A+   K D++++L
Sbjct: 281 AVEKMNGISLGEDVLYVGRAQ--KKSDREEEL 310
>sp|P20397|NUCL_XENLA Nucleolin (Protein C23)
          Length = 651

 Score = 56.2 bits (134), Expect = 1e-07
 Identities = 68/269 (25%), Positives = 112/269 (41%), Gaps = 18/269 (6%)
 Frame = +2

Query: 92   KGCEIFIAKIPKDYFEKELIPILREIGEIYTFRLMMETETNHRGFGFCLYTTHETAKRAV 271
            +G  IFI  +       EL   LRE        +      N + FG+  +++ E  ++A 
Sbjct: 231  EGLSIFIGNLNSTKEFDELKDALREFFSKKNLTIQDIRIGNSKKFGYVDFSSEEEVEKA- 289

Query: 272  LKLNNFQI-------------KKNWYLGVCFSVDNCRLFVGGIPKLKTKLEIHDEMSNFT 412
            LKL   +I              KN         D+  LFV  IP   T  E+ +   N  
Sbjct: 290  LKLTGKKILGTEVKIEKAMAFDKNKTAENKKERDSRTLFVKNIPYSTTVEELQEIFENAK 349

Query: 413  DNVVDIIVYPSAADKHKNRGFAFVEYTNHKAAAIARKKMISNGIQLWGQTVAVDWAEPER 592
            D     I  P+  D   N+G A+VE++N   A  A ++    G ++ G+++ VD+   + 
Sbjct: 350  D-----IRIPTGKDG-SNKGIAYVEFSNEDEANKALEE--KQGAEIEGRSIFVDFTGEKS 401

Query: 593  KVEDEIM---SKVKILYVRNLMLTTTENII--YLEFSQHIDDPQEIVKVKKIDDFAFVHF 757
            +            K+L V NL  + TE+ +    E +  I  PQ   + K    FAF+ F
Sbjct: 402  QNSGNKKGPEGDSKVLVVNNLSYSATEDSLREVFEKATSIRIPQNQGRAK---GFAFIEF 458

Query: 758  KSREQAEIVKNKTHGISLEGSTIEVHFAK 844
             S E A+   +  +   +EG +I + F++
Sbjct: 459  SSAEDAKDAMDSCNNTEIEGRSIRLEFSQ 487

 Score = 38.9 bits (89), Expect = 0.019
 Identities = 33/133 (24%), Positives = 64/133 (48%), Gaps = 6/133 (4%)
 Frame = +2

Query: 467 RGFAFVEYTNHKAAAIARKKMISNGIQLWGQTVAVDWAE---PERKVEDEIMSKVKILYV 637
           +GFAF+E+++ + A  A      N  ++ G+++ +++++   P+        ++ K L+V
Sbjct: 451 KGFAFIEFSSAEDAKDAMDSC--NNTEIEGRSIRLEFSQGGGPQGGGRGG-SAQSKTLFV 507

Query: 638 RNLMLTTTENIIYLEFSQHIDDPQEIVKVKKID---DFAFVHFKSREQAEIVKNKTHGIS 808
           R L   TTE  +   F   ++    IV  +       F FV F + E A+  K       
Sbjct: 508 RGLSEDTTEETLKEAFDGSVN--ARIVTDRDTGASKGFGFVDFSTAEDAKAAKEAMEDGE 565

Query: 809 LEGSTIEVHFAKP 847
           ++G+ + + FAKP
Sbjct: 566 IDGNKVTLDFAKP 578

 Score = 36.6 bits (83), Expect = 0.095
 Identities = 40/156 (25%), Positives = 71/156 (45%), Gaps = 12/156 (7%)
 Frame = +2

Query: 158 LREIGEIYTFRLMMETETNHRGFGFCLYTTHETAKRAVLKLNNFQIKKNWYL-------- 313
           LRE+ E  T   + + +   +GF F  +++ E AK A+   NN +I+             
Sbjct: 431 LREVFEKATSIRIPQNQGRAKGFAFIEFSSAEDAKDAMDSCNNTEIEGRSIRLEFSQGGG 490

Query: 314 ----GVCFSVDNCRLFVGGIPKLKTKLEIHDEMSNFTDNVVDIIVYPSAADKHKNRGFAF 481
               G   S  +  LFV G+ +  T+  + +    F  +V   IV  +  D   ++GF F
Sbjct: 491 PQGGGRGGSAQSKTLFVRGLSEDTTEETLKEA---FDGSVNARIV--TDRDTGASKGFGF 545

Query: 482 VEYTNHKAAAIARKKMISNGIQLWGQTVAVDWAEPE 589
           V+++  + A  A++ M    I   G  V +D+A+P+
Sbjct: 546 VDFSTAEDAKAAKEAMEDGEID--GNKVTLDFAKPK 579
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 101,405,592
Number of Sequences: 369166
Number of extensions: 2106243
Number of successful extensions: 5688
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5223
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5599
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 8790245790
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)