Planaria EST Database


DrC_02248

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_02248
         (531 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q16798|MAON_HUMAN  NADP-dependent malic enzyme, mitochond...   181   1e-45
sp|Q8BMF3|MAON_MOUSE  NADP-dependent malic enzyme, mitochond...   178   6e-45
sp|Q99KE1|MAOM_MOUSE  NAD-dependent malic enzyme, mitochondr...   176   2e-44
sp|P28227|MAOX_ANAPL  NADP-dependent malic enzyme (NADP-ME)       176   2e-44
sp|P23368|MAOM_HUMAN  NAD-dependent malic enzyme, mitochondr...   175   5e-44
sp|P34105|MAOX_POPTR  NADP-dependent malic enzyme (NADP-ME)       175   7e-44
sp|P40927|MAOX_COLLI  NADP-dependent malic enzyme (NADP-ME)       171   8e-43
sp|P13697|MAOX_RAT  NADP-dependent malic enzyme (NADP-ME) (M...   171   1e-42
sp|P43279|MAOC_ORYSA  NADP-dependent malic enzyme, chloropla...   170   2e-42
sp|P12628|MAOX_PHAVU  NADP-dependent malic enzyme (NADP-ME)       169   4e-42
>sp|Q16798|MAON_HUMAN NADP-dependent malic enzyme, mitochondrial precursor (NADP-ME)
           (Malic enzyme 3)
          Length = 604

 Score =  181 bits (458), Expect = 1e-45
 Identities = 87/177 (49%), Positives = 125/177 (70%), Gaps = 1/177 (0%)
 Frame = +2

Query: 2   LAEAVKEIKPTVMIGAAGVRGVFTPHILSMLTTFTDRPIVCALSNPTSKSECTAIDAYTH 181
           L E V+ +KPT +IG A + G FT  IL  + +F +RPI+ ALSNPTSK+ECTA   Y  
Sbjct: 399 LEEVVRLVKPTAIIGVAAIAGAFTEQILRDMASFHERPIIFALSNPTSKAECTAEKCYRV 458

Query: 182 TDGKGIYACGSPFPPVHYKD-KVFIPSQCNNSYIFPGLALAIVMFQIRPVTEDLFFRAAE 358
           T+G+GI+A GSPF  V  +D K FIP Q NN+Y+FPG+AL ++   IR + +++F   AE
Sbjct: 459 TEGRGIFASGSPFKSVTLEDGKTFIPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAE 518

Query: 359 TLAKQVSDEDLAQGRVFPALWTIRDVSLEIAVSVAEHAYSTGIAYHRPEPRDKREYI 529
            +A++VS++ L+QGR++P L TIRDVSL IA+ V ++AY   +A + PEP+DK  ++
Sbjct: 519 QIAQEVSEQHLSQGRLYPPLSTIRDVSLRIAIKVLDYAYKHNLASYYPEPKDKEAFV 575
>sp|Q8BMF3|MAON_MOUSE NADP-dependent malic enzyme, mitochondrial precursor (NADP-ME)
           (Malic enzyme 3)
          Length = 604

 Score =  178 bits (452), Expect = 6e-45
 Identities = 87/177 (49%), Positives = 124/177 (70%), Gaps = 1/177 (0%)
 Frame = +2

Query: 2   LAEAVKEIKPTVMIGAAGVRGVFTPHILSMLTTFTDRPIVCALSNPTSKSECTAIDAYTH 181
           L E V+ +KPT +IG A + G FT  IL  + +F +RPIV ALSNPTSK+ECTA   Y  
Sbjct: 399 LEEVVRLVKPTAIIGVAAIAGAFTEQILRDMASFHERPIVFALSNPTSKAECTAEKCYRV 458

Query: 182 TDGKGIYACGSPFPPVHYKD-KVFIPSQCNNSYIFPGLALAIVMFQIRPVTEDLFFRAAE 358
           T+G+GI+A GSPF  V  +D + F P Q NN+Y+FPG+AL ++   IR + +++F   AE
Sbjct: 459 TEGRGIFASGSPFKSVTLEDGRTFTPGQGNNAYVFPGVALGVIAGGIRHIPDEIFLLTAE 518

Query: 359 TLAKQVSDEDLAQGRVFPALWTIRDVSLEIAVSVAEHAYSTGIAYHRPEPRDKREYI 529
            +A++VS++ L+QGR++P L TIRDVSL IAV V ++AY   +A + PEP+DK  ++
Sbjct: 519 QIAQEVSEQHLSQGRLYPPLSTIRDVSLRIAVKVLDYAYKHNLASYYPEPKDKEAFV 575
>sp|Q99KE1|MAOM_MOUSE NAD-dependent malic enzyme, mitochondrial precursor (NAD-ME) (Malic
           enzyme 2)
          Length = 589

 Score =  176 bits (447), Expect = 2e-44
 Identities = 81/175 (46%), Positives = 128/175 (73%), Gaps = 1/175 (0%)
 Frame = +2

Query: 8   EAVKEIKPTVMIGAAGVRGVFTPHILSMLTTFTDRPIVCALSNPTSKSECTAIDAYTHTD 187
           +AV ++KP+V+IG AG   +FT  ++  + +  +RPI+ ALSNPT+++ECTA DAYT T+
Sbjct: 379 DAVNKLKPSVIIGVAGAGPLFTHGVIKAMASINERPIIFALSNPTAQAECTAEDAYTLTE 438

Query: 188 GKGIYACGSPFPPVHYKD-KVFIPSQCNNSYIFPGLALAIVMFQIRPVTEDLFFRAAETL 364
           G+ ++A GSPF PV  +D +VF P Q NN+YIFPG+ALA+++ + R +++ +F  AA+ L
Sbjct: 439 GRCLFASGSPFEPVKLQDGRVFTPGQGNNAYIFPGVALAVILCEARHISDTVFLEAAKAL 498

Query: 365 AKQVSDEDLAQGRVFPALWTIRDVSLEIAVSVAEHAYSTGIAYHRPEPRDKREYI 529
             Q++D +LAQGR++P+L  I++VS  IA+ +AE+ Y+  +A+  PEP DK  Y+
Sbjct: 499 TTQLTDAELAQGRLYPSLANIQEVSANIAIKLAEYLYANKMAFRYPEPEDKARYV 553
>sp|P28227|MAOX_ANAPL NADP-dependent malic enzyme (NADP-ME)
          Length = 557

 Score =  176 bits (447), Expect = 2e-44
 Identities = 87/177 (49%), Positives = 121/177 (68%), Gaps = 1/177 (0%)
 Frame = +2

Query: 2   LAEAVKEIKPTVMIGAAGVRGVFTPHILSMLTTFTDRPIVCALSNPTSKSECTAIDAYTH 181
           L + VK+IKP+V+IG A + G FT  IL  +  F  RPI+ ALSNPTSK+ECTA   Y +
Sbjct: 353 LEDIVKDIKPSVLIGVAAIGGAFTKEILQDMAAFNKRPIIFALSNPTSKAECTAEQCYKY 412

Query: 182 TDGKGIYACGSPFPPVHYKD-KVFIPSQCNNSYIFPGLALAIVMFQIRPVTEDLFFRAAE 358
           T+G+GI+A GSPF PV   + K   P Q NNSY+FPG+AL ++   ++ + ED+F   AE
Sbjct: 413 TEGRGIFASGSPFDPVTLPNGKTLYPGQGNNSYVFPGVALGVIACGLKHIGEDVFLTTAE 472

Query: 359 TLAKQVSDEDLAQGRVFPALWTIRDVSLEIAVSVAEHAYSTGIAYHRPEPRDKREYI 529
            +A+QVS+E+L +GR++P L TI+ VSL+IAV +AE AY    A   P+P+D   +I
Sbjct: 473 VIAEQVSEENLQEGRLYPPLVTIQHVSLKIAVRIAEEAYRNNTASTYPQPKDLEAFI 529
>sp|P23368|MAOM_HUMAN NAD-dependent malic enzyme, mitochondrial precursor (NAD-ME) (Malic
           enzyme 2)
          Length = 584

 Score =  175 bits (444), Expect = 5e-44
 Identities = 80/175 (45%), Positives = 125/175 (71%), Gaps = 1/175 (0%)
 Frame = +2

Query: 8   EAVKEIKPTVMIGAAGVRGVFTPHILSMLTTFTDRPIVCALSNPTSKSECTAIDAYTHTD 187
           +AV  +KP+ +IG AG   +FTP ++  + +  +RP++ ALSNPT+++ECTA +AYT T+
Sbjct: 379 DAVNILKPSTIIGVAGAGRLFTPDVIRAMASINERPVIFALSNPTAQAECTAEEAYTLTE 438

Query: 188 GKGIYACGSPFPPVHYKD-KVFIPSQCNNSYIFPGLALAIVMFQIRPVTEDLFFRAAETL 364
           G+ ++A GSPF PV   D +VF P Q NN YIFPG+ALA+++   R +++ +F  AA+ L
Sbjct: 439 GRCLFASGSPFGPVKLTDGRVFTPGQGNNVYIFPGVALAVILCNTRHISDSVFLEAAKAL 498

Query: 365 AKQVSDEDLAQGRVFPALWTIRDVSLEIAVSVAEHAYSTGIAYHRPEPRDKREYI 529
             Q++DE+LAQGR++P L  I++VS+ IA+ V E+ Y+  +A+  PEP DK +Y+
Sbjct: 499 TSQLTDEELAQGRLYPPLANIQEVSINIAIKVTEYLYANKMAFRYPEPEDKAKYV 553
>sp|P34105|MAOX_POPTR NADP-dependent malic enzyme (NADP-ME)
          Length = 591

 Score =  175 bits (443), Expect = 7e-44
 Identities = 85/171 (49%), Positives = 116/171 (67%)
 Frame = +2

Query: 2   LAEAVKEIKPTVMIGAAGVRGVFTPHILSMLTTFTDRPIVCALSNPTSKSECTAIDAYTH 181
           L E VK IKP V+IG +GV   FT  ++  + +F ++P++ ALSNPTS+SECTA +AYT 
Sbjct: 403 LLEVVKAIKPIVLIGTSGVGKTFTKEVIEAMASFNEKPLILALSNPTSQSECTAQEAYTW 462

Query: 182 TDGKGIYACGSPFPPVHYKDKVFIPSQCNNSYIFPGLALAIVMFQIRPVTEDLFFRAAET 361
           T GK I+A GSPF PV Y+ KVF+P Q NN+YIFPGL L +V+     V +D+   AAE 
Sbjct: 463 TKGKAIFASGSPFDPVEYEGKVFVPGQSNNAYIFPGLGLGLVISGAIRVHDDMLLAAAEA 522

Query: 362 LAKQVSDEDLAQGRVFPALWTIRDVSLEIAVSVAEHAYSTGIAYHRPEPRD 514
           LA Q+ +E LA+G ++P L  IR +S++IA +VA  AY  G+A   P P +
Sbjct: 523 LAGQIKEEYLAKGLIYPPLSNIRKISVQIAANVAAKAYELGLATRLPRPEN 573
>sp|P40927|MAOX_COLLI NADP-dependent malic enzyme (NADP-ME)
          Length = 557

 Score =  171 bits (434), Expect = 8e-43
 Identities = 84/177 (47%), Positives = 119/177 (67%), Gaps = 1/177 (0%)
 Frame = +2

Query: 2   LAEAVKEIKPTVMIGAAGVRGVFTPHILSMLTTFTDRPIVCALSNPTSKSECTAIDAYTH 181
           L + VK+IKPTV+IG A + G FT  IL  +  F  RPI+ ALSNPTSK+ECTA   Y +
Sbjct: 353 LEDIVKDIKPTVLIGVAAIGGAFTQQILQDMAAFNKRPIIFALSNPTSKAECTAEQLYKY 412

Query: 182 TDGKGIYACGSPFPPVHY-KDKVFIPSQCNNSYIFPGLALAIVMFQIRPVTEDLFFRAAE 358
           T+G+GI+A GSPF PV     +   P Q NNSY+FPG+AL ++   ++ + +D+F   AE
Sbjct: 413 TEGRGIFASGSPFDPVTLPSGQTLYPGQGNNSYVFPGVALGVISCGLKHIGDDVFLTTAE 472

Query: 359 TLAKQVSDEDLAQGRVFPALWTIRDVSLEIAVSVAEHAYSTGIAYHRPEPRDKREYI 529
            +A++VS+E+L +GR++P L TI+ VSL+IAV +A+ AY    A   P+P D   +I
Sbjct: 473 VIAQEVSEENLQEGRLYPPLVTIQQVSLKIAVRIAKEAYRNNTASTYPQPEDLEAFI 529
>sp|P13697|MAOX_RAT NADP-dependent malic enzyme (NADP-ME) (Malic enzyme 1)
          Length = 572

 Score =  171 bits (432), Expect = 1e-42
 Identities = 84/177 (47%), Positives = 119/177 (67%), Gaps = 1/177 (0%)
 Frame = +2

Query: 2   LAEAVKEIKPTVMIGAAGVRGVFTPHILSMLTTFTDRPIVCALSNPTSKSECTAIDAYTH 181
           L   V++IKPT +IG A + G FT  IL  +  F +RPI+ ALSNPTSK+EC+A + Y  
Sbjct: 364 LEAIVQKIKPTALIGVAAIGGAFTEQILKDMAAFNERPIIFALSNPTSKAECSAEECYKV 423

Query: 182 TDGKGIYACGSPFPPVHYKD-KVFIPSQCNNSYIFPGLALAIVMFQIRPVTEDLFFRAAE 358
           T G+ I+A GSPF PV   D +   P Q NNSY+FPG+AL +V   +R + + +F   AE
Sbjct: 424 TKGRAIFASGSPFDPVTLPDGRTLFPGQGNNSYVFPGVALGVVACGLRHINDSVFLTTAE 483

Query: 359 TLAKQVSDEDLAQGRVFPALWTIRDVSLEIAVSVAEHAYSTGIAYHRPEPRDKREYI 529
            +++QVSD+ L +GR++P L TIRDVSL+IAV + + AY   +A   PEP++K E++
Sbjct: 484 VISQQVSDKHLEEGRLYPPLNTIRDVSLKIAVKIVQDAYKEKMATVYPEPQNKEEFV 540
>sp|P43279|MAOC_ORYSA NADP-dependent malic enzyme, chloroplast precursor (NADP-ME)
          Length = 638

 Score =  170 bits (430), Expect = 2e-42
 Identities = 79/175 (45%), Positives = 113/175 (64%)
 Frame = +2

Query: 2   LAEAVKEIKPTVMIGAAGVRGVFTPHILSMLTTFTDRPIVCALSNPTSKSECTAIDAYTH 181
           L +AV+ IKPTV+IG +GV   FT  ++  + +F +RP++ +L+NPTS SECTA +AY  
Sbjct: 450 LLDAVQSIKPTVLIGTSGVGKTFTKEVIEAMASFNERPVIFSLANPTSHSECTAEEAYNW 509

Query: 182 TDGKGIYACGSPFPPVHYKDKVFIPSQCNNSYIFPGLALAIVMFQIRPVTEDLFFRAAET 361
           + G+ ++A GSPF PV Y  K+ +P Q NN+YIFPG  L +V+     V ED+   A+ET
Sbjct: 510 SQGRAVFASGSPFDPVEYNGKIHVPGQSNNAYIFPGFGLGVVISGAVRVHEDMLLAASET 569

Query: 362 LAKQVSDEDLAQGRVFPALWTIRDVSLEIAVSVAEHAYSTGIAYHRPEPRDKREY 526
           LA Q + E+  +G +FP    IR +S  IA +VA  AY  G+A   P+PRD  +Y
Sbjct: 570 LADQATQENFEKGSIFPPFTNIRKISARIAATVAAKAYELGLATRLPQPRDLEKY 624
>sp|P12628|MAOX_PHAVU NADP-dependent malic enzyme (NADP-ME)
          Length = 589

 Score =  169 bits (428), Expect = 4e-42
 Identities = 80/175 (45%), Positives = 115/175 (65%)
 Frame = +2

Query: 2   LAEAVKEIKPTVMIGAAGVRGVFTPHILSMLTTFTDRPIVCALSNPTSKSECTAIDAYTH 181
           L EAVK IKPTV+IG++G    FT  ++  + +  ++P++ ALSNPTS+SECTA +AYT 
Sbjct: 401 LLEAVKAIKPTVLIGSSGAGKTFTKEVVETMASLNEKPLILALSNPTSQSECTAEEAYTW 460

Query: 182 TDGKGIYACGSPFPPVHYKDKVFIPSQCNNSYIFPGLALAIVMFQIRPVTEDLFFRAAET 361
           + G+ I+A GSPF PV Y+ K+F+P Q NN+YIFPG  L ++M     V +++   A+E 
Sbjct: 461 SKGRAIFASGSPFDPVEYEGKLFVPGQANNAYIFPGFGLGLIMSGAIRVRDEMLLAASEA 520

Query: 362 LAKQVSDEDLAQGRVFPALWTIRDVSLEIAVSVAEHAYSTGIAYHRPEPRDKREY 526
           LA QVS+E+  +G ++P    IR +S  IA  VA  AY  G+A H   P+D  +Y
Sbjct: 521 LAAQVSEENYDKGLIYPPFTNIRKISANIAAKVAAKAYDLGLASHLKRPKDLVKY 575
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,386,368
Number of Sequences: 369166
Number of extensions: 1171769
Number of successful extensions: 3076
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2984
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3054
length of database: 68,354,980
effective HSP length: 103
effective length of database: 49,327,275
effective search space used: 3600891075
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)