Planaria EST Database


DrC_02236

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_02236
         (377 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P25782|CYSP2_HOMAM  Digestive cysteine proteinase 2 precu...   125   3e-29
sp|P13277|CYSP1_HOMAM  Digestive cysteine proteinase 1 precu...   121   6e-28
sp|P15242|TEST2_RAT  Testin 2 precursor (CMB-23) [Contains: ...   120   1e-27
sp|P25784|CYSP3_HOMAM  Digestive cysteine proteinase 3 precu...   118   5e-27
sp|Q9R014|CATJ_MOUSE  Cathepsin J precursor (Cathepsin P) (C...   117   6e-27
sp|Q26636|CATL_SARPE  Cathepsin L precursor [Contains: Cathe...   116   2e-26
sp|O35186|CATK_RAT  Cathepsin K precursor                         116   2e-26
sp|Q9GLE3|CATK_PIG  Cathepsin K precursor                         116   2e-26
sp|Q95029|CATL_DROME  Cathepsin L precursor (Cysteine protei...   115   3e-26
sp|P55097|CATK_MOUSE  Cathepsin K precursor                       114   9e-26
>sp|P25782|CYSP2_HOMAM Digestive cysteine proteinase 2 precursor
          Length = 323

 Score =  125 bits (314), Expect = 3e-29
 Identities = 56/89 (62%), Positives = 71/89 (79%)
 Frame = +3

Query: 3   IGPISVGIDASQRSFQHYSGNDIYYEPNCDPGHLNHAVLVVGYGSKDGKNFWIVKNSWGT 182
           IGPISV IDA+  SFQ YS   +YYEP+C P +L+HAVL VGYGS+ G++FW+VKNSW T
Sbjct: 236 IGPISVTIDAAHSSFQFYSSG-VYYEPSCSPSYLDHAVLAVGYGSEGGQDFWLVKNSWAT 294

Query: 183 TWGRKGYIFMSKDEDNQCGIATEANYPLM 269
           +WG  GYI MS++ +N CGIAT A+YPL+
Sbjct: 295 SWGDAGYIKMSRNRNNNCGIATVASYPLV 323
>sp|P13277|CYSP1_HOMAM Digestive cysteine proteinase 1 precursor
          Length = 322

 Score =  121 bits (303), Expect = 6e-28
 Identities = 54/87 (62%), Positives = 67/87 (77%)
 Frame = +3

Query: 3   IGPISVGIDASQRSFQHYSGNDIYYEPNCDPGHLNHAVLVVGYGSKDGKNFWIVKNSWGT 182
           IGPISV IDAS RSFQ Y    +YYEP+C    L+HAVL VGYGS+ G++FW+VKNSW T
Sbjct: 235 IGPISVAIDASHRSFQSYY-TGVYYEPSCSSSQLDHAVLAVGYGSEGGQDFWLVKNSWAT 293

Query: 183 TWGRKGYIFMSKDEDNQCGIATEANYP 263
           +WG  GYI M+++ +N CGIAT+A YP
Sbjct: 294 SWGESGYIKMARNRNNNCGIATDACYP 320
>sp|P15242|TEST2_RAT Testin 2 precursor (CMB-23) [Contains: Testin 1 (CMB-22)]
          Length = 333

 Score =  120 bits (300), Expect = 1e-27
 Identities = 56/93 (60%), Positives = 67/93 (72%), Gaps = 4/93 (4%)
 Frame = +3

Query: 3   IGPISVGIDASQRSFQHYSGNDIYYEPNCDPGHLNHAVLVVGYG----SKDGKNFWIVKN 170
           +GPISV +DAS  SFQ Y G+ IYYEP C   HLNHAVLVVGYG      DG +FW+VKN
Sbjct: 242 VGPISVAVDASHGSFQFY-GSGIYYEPQCKRVHLNHAVLVVGYGFEGEESDGNSFWLVKN 300

Query: 171 SWGTTWGRKGYIFMSKDEDNQCGIATEANYPLM 269
           SWG  WG KGY+ ++KD  N CGIAT + YP++
Sbjct: 301 SWGEEWGMKGYMKLAKDWSNHCGIATYSTYPIV 333
>sp|P25784|CYSP3_HOMAM Digestive cysteine proteinase 3 precursor
          Length = 321

 Score =  118 bits (295), Expect = 5e-27
 Identities = 52/87 (59%), Positives = 66/87 (75%)
 Frame = +3

Query: 3   IGPISVGIDASQRSFQHYSGNDIYYEPNCDPGHLNHAVLVVGYGSKDGKNFWIVKNSWGT 182
           +GPISV IDAS  SFQ YS   +YYE NC P  L+H VL VGYG++  K++W+VKNSWG+
Sbjct: 234 VGPISVAIDASHFSFQFYSSG-VYYEQNCSPTFLDHGVLAVGYGTESTKDYWLVKNSWGS 292

Query: 183 TWGRKGYIFMSKDEDNQCGIATEANYP 263
           +WG  GYI MS++ DN CGIA+E +YP
Sbjct: 293 SWGDAGYIKMSRNRDNNCGIASEPSYP 319
>sp|Q9R014|CATJ_MOUSE Cathepsin J precursor (Cathepsin P) (Catlrp-p)
          Length = 333

 Score =  117 bits (294), Expect = 6e-27
 Identities = 54/91 (59%), Positives = 67/91 (73%), Gaps = 4/91 (4%)
 Frame = +3

Query: 3   IGPISVGIDASQRSFQHYSGNDIYYEPNCDPGHLNHAVLVVGYGS----KDGKNFWIVKN 170
           IGP+S  IDAS  SF+ Y+G  IYYEPNC    +NHAVLVVGYGS    KDG N+W++KN
Sbjct: 241 IGPVSAAIDASHDSFRFYNGG-IYYEPNCSSYFVNHAVLVVGYGSEGDVKDGNNYWLIKN 299

Query: 171 SWGTTWGRKGYIFMSKDEDNQCGIATEANYP 263
           SWG  WG  GY+ ++KD +N CGIA+ A+YP
Sbjct: 300 SWGEEWGMNGYMQIAKDHNNHCGIASLASYP 330
>sp|Q26636|CATL_SARPE Cathepsin L precursor [Contains: Cathepsin L heavy chain; Cathepsin
           L light chain]
          Length = 339

 Score =  116 bits (290), Expect = 2e-26
 Identities = 52/88 (59%), Positives = 70/88 (79%), Gaps = 1/88 (1%)
 Frame = +3

Query: 3   IGPISVGIDASQRSFQHYSGNDIYYEPNCDPGHLNHAVLVVGYGSKD-GKNFWIVKNSWG 179
           +GP+SV IDAS  SFQ YS   +Y EP CD  +L+H VLVVGYG+ + G ++W+VKNSWG
Sbjct: 251 MGPVSVAIDASHESFQLYS-EGVYNEPECDEQNLDHGVLVVGYGTDESGMDYWLVKNSWG 309

Query: 180 TTWGRKGYIFMSKDEDNQCGIATEANYP 263
           TTWG +GYI M+++++NQCGIAT ++YP
Sbjct: 310 TTWGEQGYIKMARNQNNQCGIATASSYP 337
>sp|O35186|CATK_RAT Cathepsin K precursor
          Length = 329

 Score =  116 bits (290), Expect = 2e-26
 Identities = 48/89 (53%), Positives = 68/89 (76%)
 Frame = +3

Query: 3   IGPISVGIDASQRSFQHYSGNDIYYEPNCDPGHLNHAVLVVGYGSKDGKNFWIVKNSWGT 182
           +GP+SV IDAS  SFQ YS   +YY+ NCD  ++NHAVLVVGYG++ G  +WI+KNSWG 
Sbjct: 242 VGPVSVSIDASLTSFQFYS-RGVYYDENCDRDNVNHAVLVVGYGTQKGNKYWIIKNSWGE 300

Query: 183 TWGRKGYIFMSKDEDNQCGIATEANYPLM 269
           +WG KGY+ ++++++N CGI   A++P M
Sbjct: 301 SWGNKGYVLLARNKNNACGITNLASFPKM 329
>sp|Q9GLE3|CATK_PIG Cathepsin K precursor
          Length = 330

 Score =  116 bits (290), Expect = 2e-26
 Identities = 51/89 (57%), Positives = 66/89 (74%)
 Frame = +3

Query: 3   IGPISVGIDASQRSFQHYSGNDIYYEPNCDPGHLNHAVLVVGYGSKDGKNFWIVKNSWGT 182
           +GP+SV IDAS  SFQ YS   +YY+ NC+  +LNHAVL VGYG + GK  WI+KNSWG 
Sbjct: 243 VGPVSVAIDASLTSFQFYS-KGVYYDENCNSDNLNHAVLAVGYGIQKGKKHWIIKNSWGE 301

Query: 183 TWGRKGYIFMSKDEDNQCGIATEANYPLM 269
            WG KGYI M+++++N CGIA  A++P M
Sbjct: 302 NWGNKGYILMARNKNNACGIANLASFPKM 330
>sp|Q95029|CATL_DROME Cathepsin L precursor (Cysteine proteinase 1) [Contains: Cathepsin
           L heavy chain; Cathepsin L light chain]
          Length = 341

 Score =  115 bits (288), Expect = 3e-26
 Identities = 51/90 (56%), Positives = 72/90 (80%), Gaps = 1/90 (1%)
 Frame = +3

Query: 3   IGPISVGIDASQRSFQHYSGNDIYYEPNCDPGHLNHAVLVVGYGSKD-GKNFWIVKNSWG 179
           +GP+SV IDAS  SFQ YS   +Y EP CD  +L+H VLVVG+G+ + G+++W+VKNSWG
Sbjct: 253 VGPVSVAIDASHESFQFYS-EGVYNEPQCDAQNLDHGVLVVGFGTDESGEDYWLVKNSWG 311

Query: 180 TTWGRKGYIFMSKDEDNQCGIATEANYPLM 269
           TTWG KG+I M ++++NQCGIA+ ++YPL+
Sbjct: 312 TTWGDKGFIKMLRNKENQCGIASASSYPLV 341
>sp|P55097|CATK_MOUSE Cathepsin K precursor
          Length = 329

 Score =  114 bits (284), Expect = 9e-26
 Identities = 49/89 (55%), Positives = 66/89 (74%)
 Frame = +3

Query: 3   IGPISVGIDASQRSFQHYSGNDIYYEPNCDPGHLNHAVLVVGYGSKDGKNFWIVKNSWGT 182
           +GPISV IDAS  SFQ YS   +YY+ NCD  ++NHAVLVVGYG++ G   WI+KNSWG 
Sbjct: 242 VGPISVSIDASLASFQFYS-RGVYYDENCDRDNVNHAVLVVGYGTQKGSKHWIIKNSWGE 300

Query: 183 TWGRKGYIFMSKDEDNQCGIATEANYPLM 269
           +WG KGY  ++++++N CGI   A++P M
Sbjct: 301 SWGNKGYALLARNKNNACGITNMASFPKM 329
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,747,653
Number of Sequences: 369166
Number of extensions: 738039
Number of successful extensions: 2521
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2266
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2367
length of database: 68,354,980
effective HSP length: 92
effective length of database: 51,359,360
effective search space used: 1694858880
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)