Planaria EST Database


DrC_02231

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_02231
         (605 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q04671|P_HUMAN  P protein (Melanocyte-specific transporte...   221   1e-57
sp|Q8MIQ9|P_PIG  P protein (Melanocyte-specific transporter ...   219   4e-57
sp|Q62052|P_MOUSE  P protein (Melanocyte-specific transporte...   215   8e-56
sp|P74635|Y753_SYNY3  Hypothetical protein slr0753                 92   1e-18
sp|P46838|AG45_MYCLE  46 kDa membrane protein                      86   6e-17
sp|P0A607|Y2703_MYCBO  Hypothetical protein Mb2703 >gi|61250...    82   1e-15
sp|O07187|Y2685_MYCTU  Hypothetical protein Rv2685/MT2759          74   4e-13
sp|Q57486|Y608_HAEIN  Hypothetical protein HI0608                  47   3e-05
sp|P72958|Y640_SYNY3  Hypothetical protein sll0640                 45   1e-04
sp|Q21339|NAD3_CAEEL  Sodium-dependent high-affinity dicarbo...    44   3e-04
>sp|Q04671|P_HUMAN P protein (Melanocyte-specific transporter protein) (Pink-eyed
            dilution protein homolog)
          Length = 838

 Score =  221 bits (563), Expect = 1e-57
 Identities = 102/185 (55%), Positives = 140/185 (75%), Gaps = 4/185 (2%)
 Frame = +1

Query: 4    AFFGAIWIIVLSDFANFEVILDKVEWATXXXXXXXXXXMKEIEELHLITFIGKEISTLIL 183
            A  GAIW+++L+D  +FE+IL +VEWAT          M+ +  LHLI ++G++ + LI 
Sbjct: 654  AILGAIWLLILADIHDFEIILHRVEWATLLFFAALFVLMEALAHLHLIEYVGEQTALLIK 713

Query: 184  MVPENHRLLVSIIVVLWISALVSSFIDNIPFTTAMIPIIIELGNHMDI----LPLVWALA 351
            MVPE  RL+ +I++V+W+SAL SS IDNIPFT  MIP+++ L +  ++     PL++ALA
Sbjct: 714  MVPEEQRLIAAIVLVVWVSALASSLIDNIPFTATMIPVLLNLSHDPEVGLPAPPLMYALA 773

Query: 352  FGACLGGNGTLIGASANVVVAGIAQQHGYSFSFMDFFKIGFPMMLLTTFIAMNYLLVCHV 531
            FGACLGGNGTLIGASANVV AGIA+QHGY FSFM+FF++GFPMM+++  + M YLLV HV
Sbjct: 774  FGACLGGNGTLIGASANVVCAGIAEQHGYGFSFMEFFRLGFPMMVVSCTVGMCYLLVAHV 833

Query: 532  LIGWN 546
            ++GWN
Sbjct: 834  VVGWN 838

 Score = 39.3 bits (90), Expect = 0.008
 Identities = 29/110 (26%), Positives = 51/110 (46%), Gaps = 5/110 (4%)
 Frame = +1

Query: 202 RLLVSIIVVLWISALVSSFIDNIPFTTAMIPIIIELGNHMDILP--LVWALAFGACLGGN 375
           R+   II++  I+A++S+F+DN+       P+ I L   +++ P  ++ A      +GG 
Sbjct: 421 RVWAMIIMLCLIAAVLSAFLDNVTTMLLFTPVTIRLCEVLNLDPRQVLIAEVIFTNIGGA 480

Query: 376 GTLIGASANVVVAGIAQQHGYSFSFMDF---FKIGFPMMLLTTFIAMNYL 516
            T IG   NV++    +       F  F     IG  ++LL  F  +  L
Sbjct: 481 ATAIGDPPNVIIVSNQELRKMGLDFAGFTAHMFIGICLVLLVCFPLLRLL 530
>sp|Q8MIQ9|P_PIG P protein (Melanocyte-specific transporter protein) (Pink-eyed
            dilution protein homolog)
          Length = 845

 Score =  219 bits (558), Expect = 4e-57
 Identities = 103/185 (55%), Positives = 138/185 (74%), Gaps = 4/185 (2%)
 Frame = +1

Query: 4    AFFGAIWIIVLSDFANFEVILDKVEWATXXXXXXXXXXMKEIEELHLITFIGKEISTLIL 183
            A  GAIW+++L+D  +FE+IL +VEWAT          M+ +  LHLI ++G++ + LI 
Sbjct: 661  AILGAIWLLILADIHDFEIILHRVEWATLLFFAALFILMEALAHLHLIEYVGEQTALLIK 720

Query: 184  MVPENHRLLVSIIVVLWISALVSSFIDNIPFTTAMIPIIIELGNHMDIL----PLVWALA 351
            MVPE+ RL  +IIVV+W+SA+ SS IDNIPFT  MIP+++ L    +I     PL++ALA
Sbjct: 721  MVPEDQRLAAAIIVVVWVSAIASSLIDNIPFTATMIPVLLNLSRDPEISLPAPPLMYALA 780

Query: 352  FGACLGGNGTLIGASANVVVAGIAQQHGYSFSFMDFFKIGFPMMLLTTFIAMNYLLVCHV 531
             GACLGGNGTLIGASANVV AGIA+QHGY FSFM+FF++GFPMM+++  + M YLLV HV
Sbjct: 781  LGACLGGNGTLIGASANVVCAGIAEQHGYGFSFMEFFRLGFPMMVVSCMVGMCYLLVAHV 840

Query: 532  LIGWN 546
            ++GWN
Sbjct: 841  VMGWN 845

 Score = 37.0 bits (84), Expect = 0.039
 Identities = 23/88 (26%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
 Frame = +1

Query: 202 RLLVSIIVVLWISALVSSFIDNIPFTTAMIPIIIELGNHMDILP--LVWALAFGACLGGN 375
           R+   II++  I+A++S+F+DN+       P+ I L   +++ P  ++ A      +GG 
Sbjct: 428 RVWAMIIMLCLIAAVLSAFLDNVTTALLFTPVTIRLCEVLNLDPRQVLIAEVIFTNIGGA 487

Query: 376 GTLIGASANVVVAGIAQQHGYSFSFMDF 459
            T IG   NV++    +       F  F
Sbjct: 488 ATAIGDPPNVIIVSNQELRKMGLDFAGF 515
>sp|Q62052|P_MOUSE P protein (Melanocyte-specific transporter protein) (Pink-eyed
            dilution protein)
          Length = 833

 Score =  215 bits (547), Expect = 8e-56
 Identities = 97/185 (52%), Positives = 137/185 (74%), Gaps = 4/185 (2%)
 Frame = +1

Query: 4    AFFGAIWIIVLSDFANFEVILDKVEWATXXXXXXXXXXMKEIEELHLITFIGKEISTLIL 183
            A  GAIW+++L+D  +FE+IL +VEWAT          M+ +  LHL+ ++G++ + LI 
Sbjct: 649  AILGAIWLLILADIHDFEIILHRVEWATLLFFAALFVLMEALTHLHLVEYVGEQTALLIK 708

Query: 184  MVPENHRLLVSIIVVLWISALVSSFIDNIPFTTAMIPIIIELGNHMDI----LPLVWALA 351
            MVPE+ R   +I++++W+SAL SS IDNIPFT  MIP+++ L    +I    LPL++ALA
Sbjct: 709  MVPEDQRFAAAIVLIVWVSALASSLIDNIPFTATMIPVLLNLSQDPEISLPALPLMYALA 768

Query: 352  FGACLGGNGTLIGASANVVVAGIAQQHGYSFSFMDFFKIGFPMMLLTTFIAMNYLLVCHV 531
             GACLGGNGTLIGAS NVV AGIA++HGY FSFM+FF++GFP+ML++  I M YLL+ H+
Sbjct: 769  LGACLGGNGTLIGASTNVVCAGIAEKHGYGFSFMEFFRLGFPVMLMSCTIGMCYLLIAHI 828

Query: 532  LIGWN 546
            ++GWN
Sbjct: 829  VVGWN 833

 Score = 37.0 bits (84), Expect = 0.039
 Identities = 26/110 (23%), Positives = 51/110 (46%), Gaps = 5/110 (4%)
 Frame = +1

Query: 202 RLLVSIIVVLWISALVSSFIDNIPFTTAMIPIIIELGNHMDILP--LVWALAFGACLGGN 375
           R+   I ++  ++A++S+F+DN+       P+ I L   +++ P  ++ A      +GG 
Sbjct: 416 RVWAMIFMLCLMAAILSAFLDNVTTMLLFTPVTIRLCEVLNLDPRQVLIAEVIFTNIGGA 475

Query: 376 GTLIGASANVVVAGIAQQHGYSFSFMDF---FKIGFPMMLLTTFIAMNYL 516
            T IG   NV++    +       F  F     +G  ++LL +F  +  L
Sbjct: 476 ATAIGDPPNVIIVSNQELRKMGLDFAGFTAHMFLGICLVLLVSFPLLRLL 525
>sp|P74635|Y753_SYNY3 Hypothetical protein slr0753
          Length = 449

 Score = 92.0 bits (227), Expect = 1e-18
 Identities = 58/188 (30%), Positives = 95/188 (50%), Gaps = 21/188 (11%)
 Frame = +1

Query: 4   AFFGAIWIIVLSDFANFEV---ILDKVEWATXXXXXXXXXXMKEIEELHLITFIGKEIST 174
           A  GA   ++L+  +  +    IL  V+W+T          +  +E+  +   + +    
Sbjct: 254 ALMGACLALLLASQSKIDTVHNILRDVDWSTLIFFMSIFVIIGSLEKTGVTASLAQ---- 309

Query: 175 LILMVPENHRLLVSIIVVLWISALVSSFIDNIPFTTAMIPIIIE------------LGNH 318
            +L V     +    IV+++   L+SS + NIP   AM+P++ +            LG +
Sbjct: 310 -LLAVVVGQNIAFGAIVLVFTVGLLSSVVPNIPLVVAMVPLLKQYVVNIGFAGPEILGAN 368

Query: 319 MD------ILPLVWALAFGACLGGNGTLIGASANVVVAGIAQQHGYSFSFMDFFKIGFPM 480
            D      +LPL +A+ FGA LGGNGTL+GAS+N+V AGI++QHG   SF  F + G P+
Sbjct: 369 FDGQLPAEVLPLFYAMMFGATLGGNGTLVGASSNIVAAGISEQHGRPISFHRFLRYGLPV 428

Query: 481 MLLTTFIA 504
           M +   +A
Sbjct: 429 MAVQLVVA 436
>sp|P46838|AG45_MYCLE 46 kDa membrane protein
          Length = 429

 Score = 86.3 bits (212), Expect = 6e-17
 Identities = 61/181 (33%), Positives = 96/181 (53%), Gaps = 6/181 (3%)
 Frame = +1

Query: 13  GAIWIIVLSDFANFEVILDKVEWATXXXXXXXXXXMKEIEELHLITFIGKEISTLILMVP 192
           GA  +IV+S     +  L  V+W T          +  + +  ++  + +  +TL     
Sbjct: 256 GAGILIVISKLERSDY-LSSVKWETLLFFAGLFIMVGALVKTDVVNQLARATTTLT---- 310

Query: 193 ENHRLLVSIIVVLWISALVSSFIDNIPFTTAMIPIIIEL------GNHMDILPLVWALAF 354
             H LL ++++ L +S LVSS IDNIP+   M PI+ EL       +H DIL   WALA 
Sbjct: 311 GGHELL-TVVLTLGVSTLVSSIIDNIPYVATMTPIVSELVASMPDQSHTDIL--WWALAL 367

Query: 355 GACLGGNGTLIGASANVVVAGIAQQHGYSFSFMDFFKIGFPMMLLTTFIAMNYLLVCHVL 534
           GA  GGN T +GASANVV+  IA+  G   SF +F + G  + +++  +A  YL + +++
Sbjct: 368 GADFGGNLTAVGASANVVMLEIAKSAGTPISFWEFTRKGIAVTVISIALAGIYLWLRYLV 427

Query: 535 I 537
           +
Sbjct: 428 M 428

 Score = 44.3 bits (103), Expect = 2e-04
 Identities = 28/102 (27%), Positives = 54/102 (52%), Gaps = 2/102 (1%)
 Frame = +1

Query: 202 RLLVSIIVVLWISALVSSFIDNIPFTTAMIPIIIELGNHMDI--LPLVWALAFGACLGGN 375
           R+L+ +++V+   AL S+ +DN+     + P+ + +   + I   P + A  F + +GG 
Sbjct: 94  RILLLLVLVM---ALGSALLDNVTTVLLIAPVTLLVCERLTINAAPFLMAEVFASNIGGA 150

Query: 376 GTLIGASANVVVAGIAQQHGYSFSFMDFFKIGFPMMLLTTFI 501
            TL+G   N+++A  A      FSF DF     P++++ T +
Sbjct: 151 ATLVGDPPNIIIASRA-----GFSFNDFLIHLTPIVIIVTVV 187
>sp|P0A607|Y2703_MYCBO Hypothetical protein Mb2703
 sp|P0A606|Y2684_MYCTU Hypothetical protein Rv2684/MT2758
          Length = 429

 Score = 81.6 bits (200), Expect = 1e-15
 Identities = 57/175 (32%), Positives = 86/175 (49%), Gaps = 4/175 (2%)
 Frame = +1

Query: 4   AFFGAIWIIVLSDFANFEVILDKVEWATXXXXXXXXXXMKEIEELHLITFIGKEISTLIL 183
           A  GA  +IV+S     E  L  VEW T          +  + +  ++  + +  + L  
Sbjct: 252 ALLGAGMLIVVSGLTRSEY-LSSVEWDTLLFFAGLFIMVGALVKTGVVNDLARAATQLT- 309

Query: 184 MVPENHRLLVSIIVVLWISALVSSFIDNIPFTTAMIPIIIELGNHMDILPLV----WALA 351
                  ++ +  ++L +SA +S  IDNIP+   M P++ EL   M   P      WALA
Sbjct: 310 ----GGNIVATAFLILGVSAPISGIIDNIPYVATMTPLVAELVAVMGGQPSTDTPWWALA 365

Query: 352 FGACLGGNGTLIGASANVVVAGIAQQHGYSFSFMDFFKIGFPMMLLTTFIAMNYL 516
            GA  GGN T IGASANVV+ GIA++ G   SF +F + G  +  ++  +A  YL
Sbjct: 366 LGADFGGNLTAIGASANVVMLGIARRAGAPISFWEFTRKGAVVTAVSIALAAIYL 420

 Score = 40.4 bits (93), Expect = 0.004
 Identities = 27/97 (27%), Positives = 52/97 (53%), Gaps = 2/97 (2%)
 Frame = +1

Query: 205 LLVSIIVVLWISALVSSFIDNIPFTTAMIPIIIELGNHMDI--LPLVWALAFGACLGGNG 378
           L + I++VL +SAL S+ +DN+     + P+ + + + ++I     + A  F + +GG  
Sbjct: 93  LRIMILLVL-VSALASALLDNVTTVLLIAPVTLLVCDRLNINTTSFLMAEVFASNIGGAA 151

Query: 379 TLIGASANVVVAGIAQQHGYSFSFMDFFKIGFPMMLL 489
           TL+G   N++VA  A       +F DF     P++++
Sbjct: 152 TLVGDPPNIIVASRA-----GLTFNDFMLHLTPLVVI 183
>sp|O07187|Y2685_MYCTU Hypothetical protein Rv2685/MT2759
          Length = 428

 Score = 73.6 bits (179), Expect = 4e-13
 Identities = 44/115 (38%), Positives = 65/115 (56%), Gaps = 4/115 (3%)
 Frame = +1

Query: 208 LVSIIVVLWISALVSSFIDNIPFTTAMIPIIIEL----GNHMDILPLVWALAFGACLGGN 375
           L+++ ++L ISA VS  IDNIP+   M PI+ EL      H+      WALA  A  GGN
Sbjct: 314 LLTVGLILGISAPVSGIIDNIPYVATMTPIVTELVAAMPGHVHPDTFWWALALSADFGGN 373

Query: 376 GTLIGASANVVVAGIAQQHGYSFSFMDFFKIGFPMMLLTTFIAMNYLLVCHVLIG 540
            T + ASANVV+ GIA++ G   SF  F + G  +  ++  ++  YL + + + G
Sbjct: 374 LTAVAASANVVMLGIARRSGTPISFWKFTRKGAVVTAVSLVLSAVYLWLRYFVFG 428

 Score = 38.9 bits (89), Expect = 0.010
 Identities = 30/107 (28%), Positives = 55/107 (51%), Gaps = 2/107 (1%)
 Frame = +1

Query: 205 LLVSIIVVLWISALVSSFIDNIPFTTAMIPIIIELGNHMDI--LPLVWALAFGACLGGNG 378
           L + I++VL ++AL S+ +DN+     + P+ + + + + +   P + A  F + +GG  
Sbjct: 93  LRIMILLVL-VTALGSALLDNVTTVLLIAPVTLLVCDRLGVNSTPFLVAEVFASNVGGAA 151

Query: 379 TLIGASANVVVAGIAQQHGYSFSFMDFFKIGFPMMLLTTFIAMNYLL 519
           TL+G   N+++A  A       +F DF  I     +L   IA+  LL
Sbjct: 152 TLVGDPPNIIIASRA-----GLTFNDFL-IHMAPAVLVVMIALIGLL 192
>sp|Q57486|Y608_HAEIN Hypothetical protein HI0608
          Length = 461

 Score = 47.4 bits (111), Expect = 3e-05
 Identities = 30/122 (24%), Positives = 61/122 (50%), Gaps = 9/122 (7%)
 Frame = +1

Query: 181 LMVPENHRLLVSIIVVLWISALVSSFIDNIPFTTAMIPIIIELGNHMD-------ILPLV 339
           +M      L +++I +  I+A +S ++ N      M+P+ + + + +D        + ++
Sbjct: 114 IMALARGNLFIAVIYLFLITAFLSMWMSNTATAAMMLPLAMGILSQLDREKDHNTYVFVL 173

Query: 340 WALAFGACLGGNGTLIGASANVVVAGIAQQHGYSFSFMDFFKIGFPMM--LLTTFIAMNY 513
             +A+ A +GG GTL+G+  N +VA        + +F D+   G P+M  LL   I + Y
Sbjct: 174 LGIAYSASIGGMGTLVGSPPNAIVAS-----NLNLTFSDWLWYGLPIMIILLPLMIGILY 228

Query: 514 LL 519
           ++
Sbjct: 229 II 230
>sp|P72958|Y640_SYNY3 Hypothetical protein sll0640
          Length = 612

 Score = 45.4 bits (106), Expect = 1e-04
 Identities = 28/94 (29%), Positives = 50/94 (53%), Gaps = 3/94 (3%)
 Frame = +1

Query: 250 SSFIDNIPFTTAMIPIIIELGNH--MDILPLVWALAFGACLGGNGTLIGASANVVVAGIA 423
           S+F++N       +PII E      + +  L+  L++   LGG  TL+G S N++ +G+A
Sbjct: 114 SAFLNNTAIVAIFLPIIEEWARQRQISVSKLLIPLSYATILGGMITLLGTSTNILASGLA 173

Query: 424 QQ-HGYSFSFMDFFKIGFPMMLLTTFIAMNYLLV 522
           ++  G  FS   F  +G    LLT  + + Y+++
Sbjct: 174 EKLTGQGFSIFQFTPLG----LLTFSVGLIYIVL 203
>sp|Q21339|NAD3_CAEEL Sodium-dependent high-affinity dicarboxylate transporter 3
           (Na(+)/dicarboxylate cotransporter 3) (NaDC-3) (ceNaDC3)
          Length = 566

 Score = 43.9 bits (102), Expect = 3e-04
 Identities = 32/114 (28%), Positives = 54/114 (47%), Gaps = 24/114 (21%)
 Frame = +1

Query: 235 ISALVSSFIDNIPFTTAMIPI---IIE-----------------LGNHMDILPLVWALAF 354
           ++AL+SSFI N   T  M+PI   +++                 LG       LV ++ F
Sbjct: 170 VTALLSSFISNTATTAMMVPIGQSVVQQLISSFQHHPTNGERGRLGCKKMATGLVLSICF 229

Query: 355 GACLGGNGTLIGASANVVVAG----IAQQHGYSFSFMDFFKIGFPMMLLTTFIA 504
            A +GG GT  G  +N+V+ G    +  +   S +++ +    +P+MLL  F+A
Sbjct: 230 AANIGGTGTATGTPSNLVMLGQLSALFPKVDGSLNYVTWIFFAYPLMLLCLFVA 283
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,585,431
Number of Sequences: 369166
Number of extensions: 1412108
Number of successful extensions: 3774
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3657
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3761
length of database: 68,354,980
effective HSP length: 105
effective length of database: 48,957,805
effective search space used: 4699949280
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)