Planaria EST Database


DrC_02222

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_02222
         (237 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P28798|GRN_MOUSE  Granulins precursor (Acrogranin) (Proep...    52   3e-07
sp|P28797|GRN_CAVPO  Granulins precursor (Proepithelin) (PEP...    52   4e-07
sp|P80930|ENA1_HORSE  Antimicrobial peptide eNAP-1                 52   6e-07
sp|P23785|GRN_RAT  Granulins precursor [Contains: Acrogranin...    51   7e-07
sp|P28799|GRN_HUMAN  Granulins precursor (Proepithelin) (PEP...    49   5e-06
sp|P80059|PMD1_LOCMI  Pars intercerebralis major peptide D1 ...    47   1e-05
sp|P81013|GRN1_CYPCA  Granulin-1                                   45   5e-05
sp|P81015|GRN3_CYPCA  Granulin-3                                   44   2e-04
sp|P81014|GRN2_CYPCA  Granulin-2                                   42   6e-04
sp|P25777|ORYB_ORYSA  Oryzain beta chain precursor                 40   0.002
>sp|P28798|GRN_MOUSE Granulins precursor (Acrogranin) (Proepithelin) (PEPI) (PC
           cell-derived growth factor) (PCDGF) [Contains: Granulin
           1; Granulin 2; Granulin 3; Granulin 4; Granulin 5;
           Granulin 6; Granulin 7]
          Length = 589

 Score = 52.4 bits (124), Expect = 3e-07
 Identities = 25/58 (43%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
 Frame = +1

Query: 10  CPDGG-QCAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCCAPATTA*LVM--CLVGSY 174
           CPD   QC    TCC + TG YGCCP    +CC D   CC   T   L+   CL  +Y
Sbjct: 207 CPDAKTQCPDDSTCCELPTGKYGCCPMPNAICCSDHLHCCPQDTVCDLIQSKCLSKNY 264

 Score = 48.1 bits (113), Expect = 6e-06
 Identities = 21/55 (38%), Positives = 26/55 (47%)
 Frame = +1

Query: 10  CPDGGQCAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCCAPATTA*LVMCLVGSY 174
           C D  +C    TCC + +G +GCCP    VCC D + CC    T     CL   Y
Sbjct: 364 CDDFTRCPTNNTCCKLNSGDWGCCPIPEAVCCSDNQHCCPQGFT-----CLAQGY 413

 Score = 47.8 bits (112), Expect = 8e-06
 Identities = 19/40 (47%), Positives = 24/40 (60%)
 Frame = +1

Query: 7   NCPDGGQCAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCC 126
           +CP+G       TCC + TG +GCCPF+  VCC D   CC
Sbjct: 287 SCPEG------YTCCRLNTGAWGCCPFAKAVCCEDHIHCC 320

 Score = 47.8 bits (112), Expect = 8e-06
 Identities = 19/39 (48%), Positives = 22/39 (56%)
 Frame = +1

Query: 10  CPDGGQCAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCC 126
           C +G  C   QTCC    G + CCP+  GVCC D R CC
Sbjct: 517 CGEGHFCHDNQTCCKDSAGVWACCPYLKGVCCRDGRHCC 555

 Score = 44.7 bits (104), Expect = 7e-05
 Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
 Frame = +1

Query: 10  CPDGG-QCAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCCAPATTA*LV 153
           CP    +C    TCC+M  G +GCCP     CC D   CC    +  LV
Sbjct: 125 CPGSQFECPDSATCCIMVDGSWGCCPMPQASCCEDRVHCCPHGASCDLV 173

 Score = 40.8 bits (94), Expect = 0.001
 Identities = 17/40 (42%), Positives = 20/40 (50%)
 Frame = +1

Query: 7   NCPDGGQCAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCC 126
           +C   G C    +C L  +G   CCPFS GV C D   CC
Sbjct: 60  SCQTHGHCPAGYSCLLTVSGTSSCCPFSKGVSCGDGYHCC 99

 Score = 39.3 bits (90), Expect = 0.003
 Identities = 16/44 (36%), Positives = 18/44 (40%)
 Frame = +1

Query: 10  CPDGGQCAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCCAPATT 141
           C     C   QTCC    G + CC     VCC D + CC    T
Sbjct: 442 CDQHTSCPVGQTCCPSLKGSWACCQLPHAVCCEDRQHCCPAGYT 485
>sp|P28797|GRN_CAVPO Granulins precursor (Proepithelin) (PEPI) [Contains: Acrogranin;
           Granulin-1; Granulin-2; Granulin-3; Granulin-4;
           Granulin-5; Granulin-6; Granulin-7]
          Length = 591

 Score = 52.0 bits (123), Expect = 4e-07
 Identities = 21/44 (47%), Positives = 24/44 (54%), Gaps = 1/44 (2%)
 Frame = +1

Query: 10  CPDG-GQCAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCCAPAT 138
           CPD   QC    TCCL+ +G YGCCP    +CC D   CC   T
Sbjct: 208 CPDSRSQCPDDTTCCLLASGEYGCCPMPNAICCSDHLHCCPQDT 251

 Score = 48.9 bits (115), Expect = 4e-06
 Identities = 20/39 (51%), Positives = 21/39 (53%)
 Frame = +1

Query: 10  CPDGGQCAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCC 126
           C D   C   QTCC    G + CCPF  GVCC D R CC
Sbjct: 518 CGDRHFCHDEQTCCRDSRGGWACCPFHQGVCCKDQRHCC 556

 Score = 48.5 bits (114), Expect = 5e-06
 Identities = 19/40 (47%), Positives = 24/40 (60%)
 Frame = +1

Query: 7   NCPDGGQCAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCC 126
           +CP+G      QTCC + +G +GCCPF   VCC D   CC
Sbjct: 288 SCPEG------QTCCRLQSGKWGCCPFPKAVCCEDHVHCC 321

 Score = 45.4 bits (106), Expect = 4e-05
 Identities = 20/49 (40%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
 Frame = +1

Query: 10  CPDGG-QCAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCCAPATTA*LV 153
           CP G  +C    TCC M  G +GCCP     CC D   CC    +  LV
Sbjct: 112 CPGGEFECPDSSTCCHMLDGSWGCCPMPQASCCEDRVHCCPHGASCDLV 160

 Score = 39.3 bits (90), Expect = 0.003
 Identities = 16/44 (36%), Positives = 18/44 (40%)
 Frame = +1

Query: 10  CPDGGQCAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCCAPATT 141
           C     C   QTCC    G + CC     VCC D + CC    T
Sbjct: 441 CDQHASCPVRQTCCPKLGGGWACCQLPHAVCCEDGQHCCPAGYT 484

 Score = 35.0 bits (79), Expect = 0.054
 Identities = 16/40 (40%), Positives = 18/40 (45%)
 Frame = +1

Query: 7   NCPDGGQCAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCC 126
           NCP G       +C L   G   CCPFS  + C D   CC
Sbjct: 52  NCPIG------HSCVLTAAGTAACCPFSQAMACGDGHHCC 85

 Score = 33.1 bits (74), Expect = 0.21
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = +1

Query: 7   NCPDGGQCAGLQTCCLMYTGHYGCCPFSLGVCC 105
           +C +   C     CC + +G +GCCP S G  C
Sbjct: 377 SCDEVVSCRPGNICCRLASGEWGCCPSSEGYLC 409
>sp|P80930|ENA1_HORSE Antimicrobial peptide eNAP-1
          Length = 46

 Score = 51.6 bits (122), Expect = 6e-07
 Identities = 20/39 (51%), Positives = 22/39 (56%)
 Frame = +1

Query: 10  CPDGGQCAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCC 126
           C +G  C   QTCC    G   CCP+S GVCC D R CC
Sbjct: 4   CGEGHFCHDXQTCCRASQGGXACCPYSQGVCCADQRHCC 42
>sp|P23785|GRN_RAT Granulins precursor [Contains: Acrogranin; Granulin-1 (Granulin G);
           Granulin-2 (Granulin F); Granulin-3 (Granulin B)
           (Epithelin-2); Granulin-4 (Granulin A) (Epithelin-1);
           Granulin-5 (Granulin C); Granulin-6 (Granulin D);
           Granulin-7 (Granulin E)]
          Length = 588

 Score = 51.2 bits (121), Expect = 7e-07
 Identities = 24/58 (41%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
 Frame = +1

Query: 10  CPDGG-QCAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCCAPATTA*LVM--CLVGSY 174
           CPD   QC    TCC + TG YGCCP    +CC D   CC   T   L+   C+   Y
Sbjct: 206 CPDAKTQCPDDSTCCELPTGKYGCCPMPNAICCSDHLHCCPQDTVCDLIQSKCISKDY 263

 Score = 49.3 bits (116), Expect = 3e-06
 Identities = 20/40 (50%), Positives = 24/40 (60%)
 Frame = +1

Query: 7   NCPDGGQCAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCC 126
           +CPDG       TCC + TG +GCCPF+  VCC D   CC
Sbjct: 286 SCPDG------YTCCRLNTGAWGCCPFTKAVCCEDHIHCC 319

 Score = 47.4 bits (111), Expect = 1e-05
 Identities = 17/39 (43%), Positives = 21/39 (53%)
 Frame = +1

Query: 10  CPDGGQCAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCC 126
           C D   C    TCC + +G +GCCP    VCC D + CC
Sbjct: 363 CDDFSSCPSNNTCCRLSSGDWGCCPMPEAVCCLDHQHCC 401

 Score = 44.7 bits (104), Expect = 7e-05
 Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 1/49 (2%)
 Frame = +1

Query: 10  CPDGG-QCAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCCAPATTA*LV 153
           CP    +C    TCC+M  G +GCCP     CC D   CC    +  LV
Sbjct: 125 CPGSQFECPDSATCCIMIDGSWGCCPMPQASCCEDRVHCCPHGASCDLV 173

 Score = 44.7 bits (104), Expect = 7e-05
 Identities = 18/39 (46%), Positives = 21/39 (53%)
 Frame = +1

Query: 10  CPDGGQCAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCC 126
           C  G  C   Q+CC    G + CCP+  GVCC D R CC
Sbjct: 516 CGAGHFCHDNQSCCKDSQGGWACCPYVKGVCCRDGRHCC 554

 Score = 41.6 bits (96), Expect = 6e-04
 Identities = 18/42 (42%), Positives = 24/42 (57%)
 Frame = +1

Query: 1   KNNCPDGGQCAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCC 126
           +++CPDG       +C L  +G   CCPFS GV C D + CC
Sbjct: 64  RDHCPDG------YSCLLTVSGTSSCCPFSEGVSCDDGQHCC 99

 Score = 39.3 bits (90), Expect = 0.003
 Identities = 16/44 (36%), Positives = 18/44 (40%)
 Frame = +1

Query: 10  CPDGGQCAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCCAPATT 141
           C     C   QTCC    G + CC     VCC D + CC    T
Sbjct: 441 CDQHTSCPVGQTCCPSLKGSWACCQLPHAVCCEDRQHCCPAGYT 484
>sp|P28799|GRN_HUMAN Granulins precursor (Proepithelin) (PEPI) [Contains: Acrogranin;
           Paragranulin; Granulin-1 (Granulin G); Granulin-2
           (Granulin F); Granulin-3 (Granulin B); Granulin-4
           (Granulin A); Granulin-5 (Granulin C); Granulin-6
           (Granulin D); Granulin-7 (Granulin E)]
          Length = 593

 Score = 48.5 bits (114), Expect = 5e-06
 Identities = 20/45 (44%), Positives = 25/45 (55%)
 Frame = +1

Query: 7   NCPDGGQCAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCCAPATT 141
           +CPDG       TCC + +G +GCCPF+  VCC D   CC    T
Sbjct: 289 SCPDG------YTCCRLQSGAWGCCPFTQAVCCEDHIHCCPAGFT 327

 Score = 47.4 bits (111), Expect = 1e-05
 Identities = 18/40 (45%), Positives = 21/40 (52%), Gaps = 1/40 (2%)
 Frame = +1

Query: 10  CPDGG-QCAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCC 126
           CPD   +C    TCC+M  G +GCCP     CC D   CC
Sbjct: 126 CPDSQFECPDFSTCCVMVDGSWGCCPMPQASCCEDRVHCC 165

 Score = 47.4 bits (111), Expect = 1e-05
 Identities = 20/51 (39%), Positives = 25/51 (49%)
 Frame = +1

Query: 1   KNNCPDGGQCAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCCAPATTA*LV 153
           ++ CPDG       TCC + +G YGCCP     CC D   CC   T   L+
Sbjct: 212 RSRCPDG------STCCELPSGKYGCCPMPNATCCSDHLHCCPQDTVCDLI 256

 Score = 47.4 bits (111), Expect = 1e-05
 Identities = 17/44 (38%), Positives = 22/44 (50%)
 Frame = +1

Query: 10  CPDGGQCAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCCAPATT 141
           C +   C    TCC + +G +GCCP    VCC D + CC    T
Sbjct: 366 CDNVSSCPSSDTCCQLTSGEWGCCPIPEAVCCSDHQHCCPQGYT 409

 Score = 46.2 bits (108), Expect = 2e-05
 Identities = 18/39 (46%), Positives = 21/39 (53%)
 Frame = +1

Query: 10  CPDGGQCAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCC 126
           C +G  C   QTCC      + CCP+  GVCC D R CC
Sbjct: 521 CGEGHFCHDNQTCCRDNRQGWACCPYRQGVCCADRRHCC 559

 Score = 38.9 bits (89), Expect = 0.004
 Identities = 16/44 (36%), Positives = 18/44 (40%)
 Frame = +1

Query: 10  CPDGGQCAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCCAPATT 141
           C     C   QTCC    G + CC     VCC D + CC    T
Sbjct: 444 CDQHTSCPVGQTCCPSLGGSWACCQLPHAVCCEDRQHCCPAGYT 487

 Score = 33.9 bits (76), Expect = 0.12
 Identities = 13/39 (33%), Positives = 16/39 (41%)
 Frame = +1

Query: 10  CPDGGQCAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCC 126
           C     C+   +C    +G   CCPF   V C D   CC
Sbjct: 61  CQVDAHCSAGHSCIFTVSGTSSCCPFPEAVACGDGHHCC 99
>sp|P80059|PMD1_LOCMI Pars intercerebralis major peptide D1 (PMP-D1)
          Length = 54

 Score = 47.0 bits (110), Expect = 1e-05
 Identities = 18/37 (48%), Positives = 20/37 (54%)
 Frame = +1

Query: 28  CAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCCAPAT 138
           C G +TCC    G  GCCP+  GVCC D   CC   T
Sbjct: 7   CPGTETCCTTPQGEEGCCPYKEGVCCLDGIHCCPSGT 43
>sp|P81013|GRN1_CYPCA Granulin-1
          Length = 57

 Score = 45.1 bits (105), Expect = 5e-05
 Identities = 20/39 (51%), Positives = 22/39 (56%)
 Frame = +1

Query: 10  CPDGGQCAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCC 126
           CPDG       TCCL   G + CCPFS+G CC D   CC
Sbjct: 10  CPDG------TTCCLSPYGVWYCCPFSMGQCCRDGIHCC 42
>sp|P81015|GRN3_CYPCA Granulin-3
          Length = 57

 Score = 43.5 bits (101), Expect = 2e-04
 Identities = 18/39 (46%), Positives = 20/39 (51%)
 Frame = +1

Query: 10  CPDGGQCAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCC 126
           C  G  C    TCC    G + CCPF +G CC D R CC
Sbjct: 4   CDAGITCPSGTTCCRSPFGVWYCCPFLMGQCCRDGRHCC 42
>sp|P81014|GRN2_CYPCA Granulin-2
          Length = 57

 Score = 41.6 bits (96), Expect = 6e-04
 Identities = 16/33 (48%), Positives = 18/33 (54%)
 Frame = +1

Query: 28  CAGLQTCCLMYTGHYGCCPFSLGVCCPDLRTCC 126
           C    TCC    G + CCPF +G CC D R CC
Sbjct: 10  CPSRTTCCRSPFGVWYCCPFLMGQCCRDGRHCC 42
>sp|P25777|ORYB_ORYSA Oryzain beta chain precursor
          Length = 471

 Score = 40.0 bits (92), Expect = 0.002
 Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 3/45 (6%)
 Frame = +1

Query: 7   NCPDGGQCA---GLQTCCLMYTGHYGCCPFSLGVCCPDLRTCCAP 132
           +CP G  C    G +  CL++    GCCP     CC D  +CC P
Sbjct: 390 SCPAGSTCCCAFGFRNLCLVW----GCCPVEGATCCKDHASCCPP 430
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 29,923,532
Number of Sequences: 369166
Number of extensions: 568292
Number of successful extensions: 1520
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1402
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1505
length of database: 68,354,980
effective HSP length: 49
effective length of database: 59,302,965
effective search space used: 1719785985
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)