Planaria EST Database


DrC_02209

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_02209
         (506 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9ZT66|E134_MAIZE  Endo-1,3;1,4-beta-D-glucanase precursor      37   0.020
sp|P0A115|CLCD_PSESB  Carboxymethylenebutenolidase (Dienelac...    36   0.059
sp|P27136|TFDE1_RALEJ  Carboxymethylenebutenolidase I (Diene...    35   0.077
sp|Q8U088|TRPC_PYRFU  Indole-3-glycerol phosphate synthase (...    32   0.65 
sp|Q8Z3B8|DLHH_SALTI  Putative carboxymethylenebutenolidase ...    31   1.9  
sp|P27100|TCBE_PSESQ  Carboxymethylenebutenolidase (Dienelac...    30   2.5  
sp|Q9L6M9|DLHH_SALTY  Putative carboxymethylenebutenolidase ...    30   2.5  
sp|P56262|DLHH_ECOLI  Putative carboxymethylenebutenolidase ...    30   2.5  
sp|P71505|DLHH_METEX  Putative carboxymethylenebutenolidase ...    29   5.5  
sp|Q8X8L4|DLHH_ECO57  Putative carboxymethylenebutenolidase ...    29   7.2  
>sp|Q9ZT66|E134_MAIZE Endo-1,3;1,4-beta-D-glucanase precursor
          Length = 303

 Score = 37.4 bits (85), Expect = 0.020
 Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
 Frame = +1

Query: 19  FMKWLNEAGAYSLVE--KDLVIAREQLQKTGAVGKPAILGFCWGGKMSTCACQTSLYSCG 192
           F +WL         E  K L  A ++  K+ AVG     G+CWGGK+S    +TS     
Sbjct: 116 FTEWLEAHSPVKAAEDAKPLFAALKKEGKSVAVG-----GYCWGGKLSVEVGKTSDVKAV 170

Query: 193 VSVHGAGISEELVNDIKVPMMFLPAGDD 276
              H   ++ + + ++K P+  L A +D
Sbjct: 171 CLSHPYSVTADDMKEVKWPIEILGAQND 198
>sp|P0A115|CLCD_PSESB Carboxymethylenebutenolidase (Dienelactone hydrolase) (DLH)
 sp|P0A114|CLCD_PSEPU Carboxymethylenebutenolidase (Dienelactone hydrolase) (DLH)
          Length = 236

 Score = 35.8 bits (81), Expect = 0.059
 Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
 Frame = +1

Query: 37  EAGAYSLVEKDLVIAREQLQKTGAVGKPAILGFCWGGKMSTCACQTSLYSCGVSVHGAGI 216
           EAG   L E  +  AR Q    G VG   ++G+C GG ++            V  +G G+
Sbjct: 94  EAGVGDL-EAAIRYARHQPYSNGKVG---LVGYCLGGALAFLVAAKGYVDRAVGYYGVGL 149

Query: 217 SEEL--VNDIKVPMMFLPAGDD 276
            ++L  V ++K P +F   G D
Sbjct: 150 EKQLKKVPEVKHPALFHMGGQD 171
>sp|P27136|TFDE1_RALEJ Carboxymethylenebutenolidase I (Dienelactone hydrolase I) (DLH I)
          Length = 234

 Score = 35.4 bits (80), Expect = 0.077
 Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
 Frame = +1

Query: 112 GKPAILGFCWGGKMSTCACQTSLYSCGVSVHGAGISEE--LVNDIKVPMMF 258
           G+ A++G+C GG ++      SL  C +  +G G+ ++  LV  I  P MF
Sbjct: 115 GRVAVVGYCLGGALAFDVAARSLADCSIGYYGVGLEKKVSLVPAITRPAMF 165
>sp|Q8U088|TRPC_PYRFU Indole-3-glycerol phosphate synthase (IGPS)
          Length = 228

 Score = 32.3 bits (72), Expect = 0.65
 Identities = 14/42 (33%), Positives = 26/42 (61%)
 Frame = +1

Query: 4   KNSGEFMKWLNEAGAYSLVEKDLVIAREQLQKTGAVGKPAIL 129
           K S +F+K L +     ++ KD + ++E+++KT  VG  A+L
Sbjct: 63  KGSFDFLKVLCKETTLPVLRKDFITSKEEIEKTAEVGASAVL 104
>sp|Q8Z3B8|DLHH_SALTI Putative carboxymethylenebutenolidase (Dienelactone hydrolase)
           (DLH)
          Length = 270

 Score = 30.8 bits (68), Expect = 1.9
 Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 13/91 (14%)
 Frame = +1

Query: 124 ILGFCWGGKMS-TCACQTSLYSCGVSVHGAGISE----------ELVNDIKVPMMFLPAG 270
           I GFCWGG+++   A         V+ +G  + +          ++  D+  P++ L +G
Sbjct: 143 ITGFCWGGRITWLYAAHNPQLKAAVAWYGKLVGDTSLNSPKHPVDIATDLNAPVLGLYSG 202

Query: 271 DDPCL--DSVEKLLQSKPIARIVFFIVLIND 357
            D  +  +SVE + Q+   A     IV+  D
Sbjct: 203 QDTSIPQESVETMRQALRAANAKAEIVVYPD 233
>sp|P27100|TCBE_PSESQ Carboxymethylenebutenolidase (Dienelactone hydrolase) (DLH)
          Length = 238

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
 Frame = +1

Query: 112 GKPAILGFCWGGKMSTCACQTSLYSCGVSVHGAGISEEL--VNDIKVPMMF 258
           G  A++G+C GG ++          C V  +G G  + L     +K P MF
Sbjct: 115 GGVAVIGYCLGGALAYEVAAEGFAQCCVGYYGVGFEKRLERARLVKTPSMF 165
>sp|Q9L6M9|DLHH_SALTY Putative carboxymethylenebutenolidase (Dienelactone hydrolase)
           (DLH)
          Length = 270

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 23/91 (25%), Positives = 40/91 (43%), Gaps = 13/91 (14%)
 Frame = +1

Query: 124 ILGFCWGGKMS-TCACQTSLYSCGVSVHGAGISE----------ELVNDIKVPMMFLPAG 270
           I GFCWGG+++   A         V+ +G  + +          ++  D+  P++ L  G
Sbjct: 143 ITGFCWGGRITWLYAAHNPQLKAAVAWYGKLVGDTSLNSPKHPVDIATDLNAPVLGLYGG 202

Query: 271 DDPCL--DSVEKLLQSKPIARIVFFIVLIND 357
            D  +  +SVE + Q+   A     IV+  D
Sbjct: 203 QDTSIPQESVETMRQALRAANAKAEIVVYPD 233
>sp|P56262|DLHH_ECOLI Putative carboxymethylenebutenolidase (Dienelactone hydrolase)
           (DLH)
          Length = 271

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 25/98 (25%), Positives = 43/98 (43%), Gaps = 13/98 (13%)
 Frame = +1

Query: 103 GAVGKPAILGFCWGGKMS-TCACQTSLYSCGVSVHGAGISEELVN----------DIKVP 249
           G V +  I GFCWGG+++   A         V+ +G    ++ +N          D+  P
Sbjct: 136 GDVHRLMITGFCWGGRITWLYAAHNPQLKAAVAWYGKLTGDKSLNSPKQPVDIATDLNAP 195

Query: 250 MMFLPAGDDPCL--DSVEKLLQSKPIARIVFFIVLIND 357
           ++ L  G D  +  +SVE + Q+   A     I++  D
Sbjct: 196 ILGLYGGQDNSIPQESVETMRQALRAANAKAEIIVYPD 233
>sp|P71505|DLHH_METEX Putative carboxymethylenebutenolidase precursor (Dienelactone
           hydrolase) (DLH)
          Length = 291

 Score = 29.3 bits (64), Expect = 5.5
 Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 11/62 (17%)
 Frame = +1

Query: 124 ILGFCWGGKMS-TCACQTSLYSCGVSVHGAGISE----------ELVNDIKVPMMFLPAG 270
           I GFCWGG+++   A        GV+ +G  + +          ++  D+K P++ L  G
Sbjct: 166 ITGFCWGGRITWLYAAHNPAVKAGVAWYGRLVGDSSALMPKNPVDVAADLKAPVLGLYGG 225

Query: 271 DD 276
            D
Sbjct: 226 AD 227
>sp|Q8X8L4|DLHH_ECO57 Putative carboxymethylenebutenolidase (Dienelactone hydrolase)
           (DLH)
          Length = 271

 Score = 28.9 bits (63), Expect = 7.2
 Identities = 25/98 (25%), Positives = 43/98 (43%), Gaps = 13/98 (13%)
 Frame = +1

Query: 103 GAVGKPAILGFCWGGKMS-TCACQTSLYSCGVSVHGAGISEELVN----------DIKVP 249
           G V +  I GFCWGG+++   A         V+ +G    ++ +N          D+  P
Sbjct: 136 GDVHRLMITGFCWGGRITWLYAAHNPQLKAAVAWYGKLTGDKSLNSPKQPVDIATDLNAP 195

Query: 250 MMFLPAGDDPCL--DSVEKLLQSKPIARIVFFIVLIND 357
           ++ L  G D  +  +SVE + Q+   A     I++  D
Sbjct: 196 VLGLYGGLDNSIPQESVETMRQALRAANAKAEIIVYPD 233
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,279,674
Number of Sequences: 369166
Number of extensions: 1081876
Number of successful extensions: 2192
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2156
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2192
length of database: 68,354,980
effective HSP length: 103
effective length of database: 49,327,275
effective search space used: 3206272875
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)