Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dr_sW_016_I13
(506 letters)
Database: Non-redundant SwissProt sequences
184,735 sequences; 68,354,980 total letters
Score E
Sequences producing significant alignments: (bits) Value
sp|Q9ZT66|E134_MAIZE Endo-1,3;1,4-beta-D-glucanase precursor 37 0.020
sp|P0A115|CLCD_PSESB Carboxymethylenebutenolidase (Dienelac... 36 0.059
sp|P27136|TFDE1_RALEJ Carboxymethylenebutenolidase I (Diene... 35 0.077
sp|Q8U088|TRPC_PYRFU Indole-3-glycerol phosphate synthase (... 32 0.65
sp|Q8Z3B8|DLHH_SALTI Putative carboxymethylenebutenolidase ... 31 1.9
sp|P27100|TCBE_PSESQ Carboxymethylenebutenolidase (Dienelac... 30 2.5
sp|Q9L6M9|DLHH_SALTY Putative carboxymethylenebutenolidase ... 30 2.5
sp|P56262|DLHH_ECOLI Putative carboxymethylenebutenolidase ... 30 2.5
sp|P71505|DLHH_METEX Putative carboxymethylenebutenolidase ... 29 5.5
sp|Q8X8L4|DLHH_ECO57 Putative carboxymethylenebutenolidase ... 29 7.2
>sp|Q9ZT66|E134_MAIZE Endo-1,3;1,4-beta-D-glucanase precursor
Length = 303
Score = 37.4 bits (85), Expect = 0.020
Identities = 26/88 (29%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Frame = +1
Query: 19 FMKWLNEAGAYSLVE--KDLVIAREQLQKTGAVGKPAILGFCWGGKMSTCACQTSLYSCG 192
F +WL E K L A ++ K+ AVG G+CWGGK+S +TS
Sbjct: 116 FTEWLEAHSPVKAAEDAKPLFAALKKEGKSVAVG-----GYCWGGKLSVEVGKTSDVKAV 170
Query: 193 VSVHGAGISEELVNDIKVPMMFLPAGDD 276
H ++ + + ++K P+ L A +D
Sbjct: 171 CLSHPYSVTADDMKEVKWPIEILGAQND 198
>sp|P0A115|CLCD_PSESB Carboxymethylenebutenolidase (Dienelactone hydrolase) (DLH)
sp|P0A114|CLCD_PSEPU Carboxymethylenebutenolidase (Dienelactone hydrolase) (DLH)
Length = 236
Score = 35.8 bits (81), Expect = 0.059
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 2/82 (2%)
Frame = +1
Query: 37 EAGAYSLVEKDLVIAREQLQKTGAVGKPAILGFCWGGKMSTCACQTSLYSCGVSVHGAGI 216
EAG L E + AR Q G VG ++G+C GG ++ V +G G+
Sbjct: 94 EAGVGDL-EAAIRYARHQPYSNGKVG---LVGYCLGGALAFLVAAKGYVDRAVGYYGVGL 149
Query: 217 SEEL--VNDIKVPMMFLPAGDD 276
++L V ++K P +F G D
Sbjct: 150 EKQLKKVPEVKHPALFHMGGQD 171
>sp|P27136|TFDE1_RALEJ Carboxymethylenebutenolidase I (Dienelactone hydrolase I) (DLH I)
Length = 234
Score = 35.4 bits (80), Expect = 0.077
Identities = 17/51 (33%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Frame = +1
Query: 112 GKPAILGFCWGGKMSTCACQTSLYSCGVSVHGAGISEE--LVNDIKVPMMF 258
G+ A++G+C GG ++ SL C + +G G+ ++ LV I P MF
Sbjct: 115 GRVAVVGYCLGGALAFDVAARSLADCSIGYYGVGLEKKVSLVPAITRPAMF 165
>sp|Q8U088|TRPC_PYRFU Indole-3-glycerol phosphate synthase (IGPS)
Length = 228
Score = 32.3 bits (72), Expect = 0.65
Identities = 14/42 (33%), Positives = 26/42 (61%)
Frame = +1
Query: 4 KNSGEFMKWLNEAGAYSLVEKDLVIAREQLQKTGAVGKPAIL 129
K S +F+K L + ++ KD + ++E+++KT VG A+L
Sbjct: 63 KGSFDFLKVLCKETTLPVLRKDFITSKEEIEKTAEVGASAVL 104
>sp|Q8Z3B8|DLHH_SALTI Putative carboxymethylenebutenolidase (Dienelactone hydrolase)
(DLH)
Length = 270
Score = 30.8 bits (68), Expect = 1.9
Identities = 23/91 (25%), Positives = 41/91 (45%), Gaps = 13/91 (14%)
Frame = +1
Query: 124 ILGFCWGGKMS-TCACQTSLYSCGVSVHGAGISE----------ELVNDIKVPMMFLPAG 270
I GFCWGG+++ A V+ +G + + ++ D+ P++ L +G
Sbjct: 143 ITGFCWGGRITWLYAAHNPQLKAAVAWYGKLVGDTSLNSPKHPVDIATDLNAPVLGLYSG 202
Query: 271 DDPCL--DSVEKLLQSKPIARIVFFIVLIND 357
D + +SVE + Q+ A IV+ D
Sbjct: 203 QDTSIPQESVETMRQALRAANAKAEIVVYPD 233
>sp|P27100|TCBE_PSESQ Carboxymethylenebutenolidase (Dienelactone hydrolase) (DLH)
Length = 238
Score = 30.4 bits (67), Expect = 2.5
Identities = 15/51 (29%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
Frame = +1
Query: 112 GKPAILGFCWGGKMSTCACQTSLYSCGVSVHGAGISEEL--VNDIKVPMMF 258
G A++G+C GG ++ C V +G G + L +K P MF
Sbjct: 115 GGVAVIGYCLGGALAYEVAAEGFAQCCVGYYGVGFEKRLERARLVKTPSMF 165
>sp|Q9L6M9|DLHH_SALTY Putative carboxymethylenebutenolidase (Dienelactone hydrolase)
(DLH)
Length = 270
Score = 30.4 bits (67), Expect = 2.5
Identities = 23/91 (25%), Positives = 40/91 (43%), Gaps = 13/91 (14%)
Frame = +1
Query: 124 ILGFCWGGKMS-TCACQTSLYSCGVSVHGAGISE----------ELVNDIKVPMMFLPAG 270
I GFCWGG+++ A V+ +G + + ++ D+ P++ L G
Sbjct: 143 ITGFCWGGRITWLYAAHNPQLKAAVAWYGKLVGDTSLNSPKHPVDIATDLNAPVLGLYGG 202
Query: 271 DDPCL--DSVEKLLQSKPIARIVFFIVLIND 357
D + +SVE + Q+ A IV+ D
Sbjct: 203 QDTSIPQESVETMRQALRAANAKAEIVVYPD 233
>sp|P56262|DLHH_ECOLI Putative carboxymethylenebutenolidase (Dienelactone hydrolase)
(DLH)
Length = 271
Score = 30.4 bits (67), Expect = 2.5
Identities = 25/98 (25%), Positives = 43/98 (43%), Gaps = 13/98 (13%)
Frame = +1
Query: 103 GAVGKPAILGFCWGGKMS-TCACQTSLYSCGVSVHGAGISEELVN----------DIKVP 249
G V + I GFCWGG+++ A V+ +G ++ +N D+ P
Sbjct: 136 GDVHRLMITGFCWGGRITWLYAAHNPQLKAAVAWYGKLTGDKSLNSPKQPVDIATDLNAP 195
Query: 250 MMFLPAGDDPCL--DSVEKLLQSKPIARIVFFIVLIND 357
++ L G D + +SVE + Q+ A I++ D
Sbjct: 196 ILGLYGGQDNSIPQESVETMRQALRAANAKAEIIVYPD 233
>sp|P71505|DLHH_METEX Putative carboxymethylenebutenolidase precursor (Dienelactone
hydrolase) (DLH)
Length = 291
Score = 29.3 bits (64), Expect = 5.5
Identities = 17/62 (27%), Positives = 29/62 (46%), Gaps = 11/62 (17%)
Frame = +1
Query: 124 ILGFCWGGKMS-TCACQTSLYSCGVSVHGAGISE----------ELVNDIKVPMMFLPAG 270
I GFCWGG+++ A GV+ +G + + ++ D+K P++ L G
Sbjct: 166 ITGFCWGGRITWLYAAHNPAVKAGVAWYGRLVGDSSALMPKNPVDVAADLKAPVLGLYGG 225
Query: 271 DD 276
D
Sbjct: 226 AD 227
>sp|Q8X8L4|DLHH_ECO57 Putative carboxymethylenebutenolidase (Dienelactone hydrolase)
(DLH)
Length = 271
Score = 28.9 bits (63), Expect = 7.2
Identities = 25/98 (25%), Positives = 43/98 (43%), Gaps = 13/98 (13%)
Frame = +1
Query: 103 GAVGKPAILGFCWGGKMS-TCACQTSLYSCGVSVHGAGISEELVN----------DIKVP 249
G V + I GFCWGG+++ A V+ +G ++ +N D+ P
Sbjct: 136 GDVHRLMITGFCWGGRITWLYAAHNPQLKAAVAWYGKLTGDKSLNSPKQPVDIATDLNAP 195
Query: 250 MMFLPAGDDPCL--DSVEKLLQSKPIARIVFFIVLIND 357
++ L G D + +SVE + Q+ A I++ D
Sbjct: 196 VLGLYGGLDNSIPQESVETMRQALRAANAKAEIIVYPD 233
Database: Non-redundant SwissProt sequences
Posted date: Dec 6, 2005 7:40 AM
Number of letters in database: 68,354,980
Number of sequences in database: 184,735
Database: swissprot.01
Posted date: Dec 6, 2005 8:18 AM
Number of letters in database: 66,202,850
Number of sequences in database: 184,431
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,279,674
Number of Sequences: 369166
Number of extensions: 1081876
Number of successful extensions: 2192
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2156
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2192
length of database: 68,354,980
effective HSP length: 103
effective length of database: 49,327,275
effective search space used: 3206272875
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)