Planaria EST Database


DrC_02100

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_02100
         (529 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P56560|AOFB_BOVIN  Amine oxidase [flavin-containing] B (M...    74   2e-13
sp|Q7YRB7|AOFB_CANFA  Amine oxidase [flavin-containing] B (M...    74   3e-13
sp|P49253|AOF_ONCMY  Amine oxidase [flavin-containing] (Mono...    73   4e-13
sp|P27338|AOFB_HUMAN  Amine oxidase [flavin-containing] B (M...    73   5e-13
sp|Q5RE98|AOFB_PONPY  Amine oxidase [flavin-containing] B (M...    73   5e-13
sp|P58028|AOFB_CAVPO  Amine oxidase [flavin-containing] B (M...    70   3e-12
sp|Q6PLK3|AOFB_PIG  Amine oxidase [flavin-containing] B (Mon...    69   5e-12
sp|Q64133|AOFA_MOUSE  Amine oxidase [flavin-containing] A (M...    68   2e-11
sp|P21396|AOFA_RAT  Amine oxidase [flavin-containing] A (Mon...    67   3e-11
sp|Q8BW75|AOFB_MOUSE  Amine oxidase [flavin-containing] B (M...    67   3e-11
>sp|P56560|AOFB_BOVIN Amine oxidase [flavin-containing] B (Monoamine oxidase type B)
           (MAO-B)
          Length = 520

 Score = 73.9 bits (180), Expect = 2e-13
 Identities = 48/167 (28%), Positives = 80/167 (47%), Gaps = 1/167 (0%)
 Frame = +3

Query: 6   FANSCGGFHNFLESGEGTAHGYKIVGGAARILSTILEVIGSDTIDIHTVVSSISKKDTHS 185
           +   CGG      +  G     K VGG+ ++   I++++G D + +   V  I +   + 
Sbjct: 188 YVKQCGGTTRIFSTSNG-GQERKFVGGSGQVSERIMDLLG-DRVKLERPVIHIDQTGENV 245

Query: 186 EIHTVSGTTYKAKHVILTVPPHLMLNIQFDPPLNPTKIEYFSSVIPGHVIKVILTYETRF 365
            + T++   Y+AK+VI  VPP L + I F+PPL   + +  + V  G VIK I+ Y+  F
Sbjct: 246 LVETLNHELYEAKYVISAVPPVLGMKIHFNPPLPMMRNQLTTRVPLGSVIKSIVYYKEPF 305

Query: 366 WMSGGYSGEIVSNGGPSFIDGCSTGPLCVVFDATTENNS-PALVCFI 503
           W +  Y G ++  G           P+    D T  + S PA++ FI
Sbjct: 306 WRNMDYCGSMIIEG--------EEAPVAYALDDTKPDGSYPAIIGFI 344
>sp|Q7YRB7|AOFB_CANFA Amine oxidase [flavin-containing] B (Monoamine oxidase type B)
           (MAO-B)
          Length = 520

 Score = 73.6 bits (179), Expect = 3e-13
 Identities = 46/167 (27%), Positives = 80/167 (47%), Gaps = 1/167 (0%)
 Frame = +3

Query: 6   FANSCGGFHNFLESGEGTAHGYKIVGGAARILSTILEVIGSDTIDIHTVVSSISKKDTHS 185
           +   CGG    + +  G     K VGG+ ++   I++++G D + +   V+ I +   + 
Sbjct: 188 YVKQCGGTTRIISTTNG-GQERKFVGGSGQVSERIMDLLG-DQVKLERPVTHIDQTGENV 245

Query: 186 EIHTVSGTTYKAKHVILTVPPHLMLNIQFDPPLNPTKIEYFSSVIPGHVIKVILTYETRF 365
            + T++   Y+AK+VI  +PP L + I F+PPL   + +  + V  G VIK I+ Y+  F
Sbjct: 246 LVETLNHEVYEAKYVISAIPPTLGMKIHFNPPLPMMRNQLITRVPLGSVIKCIVYYKEPF 305

Query: 366 WMSGGYSGEIVSNGGPSFIDGCSTGPLCVVFDAT-TENNSPALVCFI 503
           W    Y G ++  G           P+    D T  + N  A++ FI
Sbjct: 306 WRKKDYCGTMIIEG--------EEAPIAYTLDDTKPDGNYAAIMGFI 344
>sp|P49253|AOF_ONCMY Amine oxidase [flavin-containing] (Monoamine oxidase) (MAO)
          Length = 522

 Score = 73.2 bits (178), Expect = 4e-13
 Identities = 48/167 (28%), Positives = 79/167 (47%), Gaps = 1/167 (0%)
 Frame = +3

Query: 6   FANSCGGFHNFLESGEGTAHGYKIVGGAARILSTILEVIGSDTIDIHTVVSSISKKDTHS 185
           +   CGG      +  G     K +GG+++I   + + +G + + + + V  I +     
Sbjct: 190 YVKQCGGTMRIFSTTNG-GQERKFLGGSSQISECMAKELG-ERVKMESPVYKIDQTGDMV 247

Query: 186 EIHTVSGTTYKAKHVILTVPPHLMLNIQFDPPLNPTKIEYFSSVIPGHVIKVILTYETRF 365
           E+ T++  TYKAK+VI+  PP L L + F+P L P + +    V  G VIK I+ Y   F
Sbjct: 248 EVETLNKETYKAKYVIVATPPGLNLKMHFNPELPPLRNQLIHRVPMGSVIKCIVYYRENF 307

Query: 366 WMSGGYSGEIVSNGGPSFIDGCSTGPLCVVFDATTENNS-PALVCFI 503
           W   GY G +V              P+ +  D T  + + PA++ FI
Sbjct: 308 WRKKGYCGTMVIEE--------EEAPIGLTLDDTKPDGTVPAIMGFI 346
>sp|P27338|AOFB_HUMAN Amine oxidase [flavin-containing] B (Monoamine oxidase type B)
           (MAO-B)
          Length = 520

 Score = 72.8 bits (177), Expect = 5e-13
 Identities = 47/166 (28%), Positives = 79/166 (47%)
 Frame = +3

Query: 6   FANSCGGFHNFLESGEGTAHGYKIVGGAARILSTILEVIGSDTIDIHTVVSSISKKDTHS 185
           +   CGG    + +  G     K VGG+ ++   I++++G D + +   V  I +   + 
Sbjct: 188 YVKQCGGTTRIISTTNG-GQERKFVGGSGQVSERIMDLLG-DRVKLERPVIYIDQTRENV 245

Query: 186 EIHTVSGTTYKAKHVILTVPPHLMLNIQFDPPLNPTKIEYFSSVIPGHVIKVILTYETRF 365
            + T++   Y+AK+VI  +PP L + I F+PPL   + +  + V  G VIK I+ Y+  F
Sbjct: 246 LVETLNHEMYEAKYVISAIPPTLGMKIHFNPPLPMMRNQMITRVPLGSVIKCIVYYKEPF 305

Query: 366 WMSGGYSGEIVSNGGPSFIDGCSTGPLCVVFDATTENNSPALVCFI 503
           W    Y G ++       IDG        + D   E N  A++ FI
Sbjct: 306 WRKKDYCGTMI-------IDGEEAPVAYTLDDTKPEGNYAAIMGFI 344
>sp|Q5RE98|AOFB_PONPY Amine oxidase [flavin-containing] B (Monoamine oxidase type B)
           (MAO-B)
          Length = 520

 Score = 72.8 bits (177), Expect = 5e-13
 Identities = 47/166 (28%), Positives = 79/166 (47%)
 Frame = +3

Query: 6   FANSCGGFHNFLESGEGTAHGYKIVGGAARILSTILEVIGSDTIDIHTVVSSISKKDTHS 185
           +   CGG    + +  G     K VGG+ ++   I++++G D + +   V  I +   + 
Sbjct: 188 YVKQCGGTTRIISTTNG-GQERKFVGGSGQVSERIMDLLG-DRVKLERPVIYIDQTRENV 245

Query: 186 EIHTVSGTTYKAKHVILTVPPHLMLNIQFDPPLNPTKIEYFSSVIPGHVIKVILTYETRF 365
            + T++   Y+AK+VI  +PP L + I F+PPL   + +  + V  G VIK I+ Y+  F
Sbjct: 246 LVETLNHEMYEAKYVISAIPPTLGMKIHFNPPLPMMRNQMITRVPLGSVIKCIVYYKEPF 305

Query: 366 WMSGGYSGEIVSNGGPSFIDGCSTGPLCVVFDATTENNSPALVCFI 503
           W    Y G ++       IDG        + D   E N  A++ FI
Sbjct: 306 WRKKDYCGTMI-------IDGEEAPVAYTLDDTKPEGNYAAIMGFI 344
>sp|P58028|AOFB_CAVPO Amine oxidase [flavin-containing] B (Monoamine oxidase type B)
           (MAO-B)
          Length = 520

 Score = 70.1 bits (170), Expect = 3e-12
 Identities = 48/166 (28%), Positives = 77/166 (46%)
 Frame = +3

Query: 6   FANSCGGFHNFLESGEGTAHGYKIVGGAARILSTILEVIGSDTIDIHTVVSSISKKDTHS 185
           +   CGG    + +  G     K VGG+ +I   I+ ++G D + +   V  I +     
Sbjct: 188 YVKQCGGTTRIISTTNG-GQERKFVGGSGQISERIMNLLG-DRVKLQRPVVYIDQTGESV 245

Query: 186 EIHTVSGTTYKAKHVILTVPPHLMLNIQFDPPLNPTKIEYFSSVIPGHVIKVILTYETRF 365
            + T++   Y+AK+VI  +PP L + I F PPL   K +  S V  G VIK I+ Y+  F
Sbjct: 246 LVETLNHEIYEAKYVISAIPPALGMKIHFKPPLPMMKNQLVSRVPLGSVIKCIVYYKDPF 305

Query: 366 WMSGGYSGEIVSNGGPSFIDGCSTGPLCVVFDATTENNSPALVCFI 503
           W    + G +V       I+G     L  + D   + +  A++ FI
Sbjct: 306 WRKKDFCGTMV-------IEGEEAPVLYTMDDTKPDGSYAAIIGFI 344
>sp|Q6PLK3|AOFB_PIG Amine oxidase [flavin-containing] B (Monoamine oxidase type B)
           (MAO-B)
          Length = 520

 Score = 69.3 bits (168), Expect = 5e-12
 Identities = 39/134 (29%), Positives = 66/134 (49%)
 Frame = +3

Query: 6   FANSCGGFHNFLESGEGTAHGYKIVGGAARILSTILEVIGSDTIDIHTVVSSISKKDTHS 185
           +   CGG    + +  G     K VGG+ ++   I +++G D + +   V  I +   + 
Sbjct: 188 YVKQCGGTTRIISTTNG-GQERKFVGGSGQVTERIKDLLG-DRVKLERPVVHIDQTGENV 245

Query: 186 EIHTVSGTTYKAKHVILTVPPHLMLNIQFDPPLNPTKIEYFSSVIPGHVIKVILTYETRF 365
            + T++   Y+AK+VI  +PP L + I F PPL   + +  + V  G VIK I+ Y+  F
Sbjct: 246 LVETLNHEVYEAKYVISAIPPVLGMKIHFSPPLPMMRNQLITRVPLGSVIKCIVYYKEPF 305

Query: 366 WMSGGYSGEIVSNG 407
           W    Y G ++  G
Sbjct: 306 WRHKDYCGSMIIEG 319
>sp|Q64133|AOFA_MOUSE Amine oxidase [flavin-containing] A (Monoamine oxidase type A)
           (MAO-A)
          Length = 526

 Score = 67.8 bits (164), Expect = 2e-11
 Identities = 46/167 (27%), Positives = 76/167 (45%), Gaps = 1/167 (0%)
 Frame = +3

Query: 6   FANSCGGFHNFLESGEGTAHGYKIVGGAARILSTILEVIGSDTIDIHTVVSSISKKDTHS 185
           +   CGG         G     K VGG+ +I   I+ ++G D + + + V+ I + D + 
Sbjct: 197 YVRQCGGTSRIFSVTNG-GQERKFVGGSGQISEQIMVLLG-DKVKLSSPVTYIDQTDDNI 254

Query: 186 EIHTVSGTTYKAKHVILTVPPHLMLNIQFDPPLNPTKIEYFSSVIPGHVIKVILTYETRF 365
            I T++   Y+ K+VI  +PP L   I F P L P + +    +  G VIK ++ Y+  F
Sbjct: 255 IIETLNHEHYECKYVISAIPPVLTAKIHFKPELPPERNQLIQRLPMGAVIKCMVYYKEAF 314

Query: 366 WMSGGYSGEIVSNGGPSFIDGCSTGPLCVVFDATTENNS-PALVCFI 503
           W    Y G ++              P+ +  D T  + S PA++ FI
Sbjct: 315 WKKKDYCGCMIIED--------EEAPISITLDDTKPDGSMPAIMGFI 353
>sp|P21396|AOFA_RAT Amine oxidase [flavin-containing] A (Monoamine oxidase type A)
           (MAO-A)
          Length = 526

 Score = 67.0 bits (162), Expect = 3e-11
 Identities = 44/167 (26%), Positives = 76/167 (45%), Gaps = 1/167 (0%)
 Frame = +3

Query: 6   FANSCGGFHNFLESGEGTAHGYKIVGGAARILSTILEVIGSDTIDIHTVVSSISKKDTHS 185
           +   CGG         G     K VGG+ ++   I+ ++G D + + + V+ I + D + 
Sbjct: 197 YVRQCGGTARIFSVTNG-GQERKFVGGSGQVSEQIMGLLG-DKVKLSSPVTYIDQTDDNI 254

Query: 186 EIHTVSGTTYKAKHVILTVPPHLMLNIQFDPPLNPTKIEYFSSVIPGHVIKVILTYETRF 365
            + T++   Y+ K+VI  +PP L   I F P L P + +    +  G VIK ++ Y+  F
Sbjct: 255 IVETLNHEHYECKYVISAIPPILTAKIHFKPELPPERNQLIQRLPMGAVIKCMVYYKEAF 314

Query: 366 WMSGGYSGEIVSNGGPSFIDGCSTGPLCVVFDATTENNS-PALVCFI 503
           W    Y G ++              P+ +  D T  + S PA++ FI
Sbjct: 315 WKKKDYCGCMIIED--------EEAPIAITLDDTKPDGSLPAIMGFI 353
>sp|Q8BW75|AOFB_MOUSE Amine oxidase [flavin-containing] B (Monoamine oxidase type B)
           (MAO-B)
          Length = 520

 Score = 66.6 bits (161), Expect = 3e-11
 Identities = 37/134 (27%), Positives = 66/134 (49%)
 Frame = +3

Query: 6   FANSCGGFHNFLESGEGTAHGYKIVGGAARILSTILEVIGSDTIDIHTVVSSISKKDTHS 185
           +   CGG    + +  G     K +GG+ ++   I +++G D + +   V  I +   + 
Sbjct: 188 YVKQCGGTTRIISTTNG-GQERKFIGGSGQVSERIKDILG-DRVKLERPVIHIDQTGENV 245

Query: 186 EIHTVSGTTYKAKHVILTVPPHLMLNIQFDPPLNPTKIEYFSSVIPGHVIKVILTYETRF 365
            + T++   Y+AK+VI  +PP L + I + PPL   + +  S V  G VIK ++ Y+  F
Sbjct: 246 IVKTLNHEIYEAKYVISAIPPALGMKIHYSPPLPMLRNQLISRVPLGSVIKCMVYYKEPF 305

Query: 366 WMSGGYSGEIVSNG 407
           W    + G +V  G
Sbjct: 306 WRKKDFCGTMVIEG 319
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,008,103
Number of Sequences: 369166
Number of extensions: 1366804
Number of successful extensions: 3213
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3089
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3207
length of database: 68,354,980
effective HSP length: 103
effective length of database: 49,327,275
effective search space used: 3551563800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)