Planaria EST Database


DrC_02053

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_02053
         (684 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P55326|YZG1_CAEEL  Hypothetical protein F13E6.1 in chromo...    76   7e-14
sp|Q62393|TPD52_MOUSE  Tumor protein D52 (mD52)                    68   3e-11
sp|P55327|TPD52_HUMAN  Tumor protein D52 (N8 protein)              67   3e-11
sp|Q95212|TPD52_RABIT  Tumor protein D52 (28 kDa calcium-dep...    66   7e-11
sp|O43399|TPD54_HUMAN  Tumor protein D54 (hD54) (Tumor prote...    66   1e-10
sp|Q5RCT1|TPD54_PONPY  Tumor protein D54 (Tumor protein D52-...    64   4e-10
sp|Q9I8F4|TPD53_CHICK  Tumor protein D53 homolog (Tumor prot...    63   6e-10
sp|Q6PCT3|TPD54_RAT  Tumor protein D54 (Tumor protein D52-li...    60   7e-09
sp|Q16890|TPD53_HUMAN  Tumor protein D53 (hD53) (Tumor prote...    59   9e-09
sp|O54818|TPD53_MOUSE  Tumor protein D53 (mD53) (Tumor prote...    59   9e-09
>sp|P55326|YZG1_CAEEL Hypothetical protein F13E6.1 in chromosome X
          Length = 195

 Score = 76.3 bits (186), Expect = 7e-14
 Identities = 45/133 (33%), Positives = 74/133 (55%), Gaps = 3/133 (2%)
 Frame = +2

Query: 83  SSDNTKDII---DEDSLREQLSKTEEEIITLRQVLNVKLKLAQDLKRQLGITVINEMKGD 253
           SS + K ++   ++D LR +L KTEEEI TL+QVL+ + K A +LKR+LG+T  +E+  D
Sbjct: 48  SSSSNKIVLSQAEKDLLRTELDKTEEEISTLKQVLSARQKHAAELKRKLGLTPFSELSQD 107

Query: 254 IIHGINTIKESNTFKATTNVMKNVKDXXXXXXXXXXXXXXQKIGLLRNTNTFKSIEGKMG 433
           I   + T+ +++ ++ T  V     D              +K   +RN++ FKS E K+G
Sbjct: 108 INRSLKTVTDTDAYQKTAEVAAATSD-----------TVKEKWNDMRNSSLFKSFESKLG 156

Query: 434 TAYTSVKTKLTNS 472
           +A  + K   + S
Sbjct: 157 SALNNAKMAASTS 169
>sp|Q62393|TPD52_MOUSE Tumor protein D52 (mD52)
          Length = 185

 Score = 67.8 bits (164), Expect = 3e-11
 Identities = 40/128 (31%), Positives = 67/128 (52%)
 Frame = +2

Query: 110 DEDSLREQLSKTEEEIITLRQVLNVKLKLAQDLKRQLGITVINEMKGDIIHGINTIKESN 289
           +++ LR +L+K EEEI TL QVL  K K   +LKR+LGI+ + E K +I  G   +  +N
Sbjct: 35  EQEELRRELTKVEEEIQTLSQVLAAKEKHLAELKRKLGISSLQEFKQNIAKGWQDVTATN 94

Query: 290 TFKATTNVMKNVKDXXXXXXXXXXXXXXQKIGLLRNTNTFKSIEGKMGTAYTSVKTKLTN 469
            +K T+  +                   +K+  ++N+ TFKS E K+     ++K+K+  
Sbjct: 95  AYKKTSETLSQAGQKASAAFSSVGSVITKKLEDVKNSPTFKSFEEKV----ENLKSKVGG 150

Query: 470 SKSTNDDY 493
           +K    D+
Sbjct: 151 AKPAGGDF 158
>sp|P55327|TPD52_HUMAN Tumor protein D52 (N8 protein)
          Length = 184

 Score = 67.4 bits (163), Expect = 3e-11
 Identities = 44/146 (30%), Positives = 75/146 (51%), Gaps = 2/146 (1%)
 Frame = +2

Query: 62  EGE--ASLHSSDNTKDIIDEDSLREQLSKTEEEIITLRQVLNVKLKLAQDLKRQLGITVI 235
           EGE  A+  S+  T    +++ LR +L+K EEEI TL QVL  K K   ++KR+LGI  +
Sbjct: 17  EGEDVAATISATETLSEEEQEELRRELAKVEEEIQTLSQVLAAKEKHLAEIKRKLGINSL 76

Query: 236 NEMKGDIIHGINTIKESNTFKATTNVMKNVKDXXXXXXXXXXXXXXQKIGLLRNTNTFKS 415
            E+K +I  G   +  ++ +K T+  +                   +K+  ++N+ TFKS
Sbjct: 77  QELKQNIAKGWQDVTATSAYKKTSETLSQAGQKASAAFSSVGSVITKKLEDVKNSPTFKS 136

Query: 416 IEGKMGTAYTSVKTKLTNSKSTNDDY 493
            E K+     ++K+K+  +K    D+
Sbjct: 137 FEEKV----ENLKSKVGGTKPAGGDF 158
>sp|Q95212|TPD52_RABIT Tumor protein D52 (28 kDa calcium-dependent phosphoprotein) (pp28)
          Length = 184

 Score = 66.2 bits (160), Expect = 7e-11
 Identities = 41/144 (28%), Positives = 73/144 (50%)
 Frame = +2

Query: 62  EGEASLHSSDNTKDIIDEDSLREQLSKTEEEIITLRQVLNVKLKLAQDLKRQLGITVINE 241
           E  A+  S+  T    +++ LR +L+K EEEI TL QVL  + K   ++KR+LGI  + E
Sbjct: 19  EDAAATISATETLSEEEQEELRRELAKVEEEIQTLSQVLAAREKHLAEIKRKLGINSLQE 78

Query: 242 MKGDIIHGINTIKESNTFKATTNVMKNVKDXXXXXXXXXXXXXXQKIGLLRNTNTFKSIE 421
           +K +I  G   +  ++ +K T+  +                   +K+  ++N+ TFKS E
Sbjct: 79  LKQNIAKGWQDVTATSAYKKTSETLSQAGQKASAAFSSVGSVITKKLEDVKNSPTFKSFE 138

Query: 422 GKMGTAYTSVKTKLTNSKSTNDDY 493
            K+     ++K+K+  +K    D+
Sbjct: 139 EKV----ENLKSKVGGTKPAGGDF 158
>sp|O43399|TPD54_HUMAN Tumor protein D54 (hD54) (Tumor protein D52-like 2)
          Length = 206

 Score = 65.9 bits (159), Expect = 1e-10
 Identities = 41/147 (27%), Positives = 71/147 (48%), Gaps = 20/147 (13%)
 Frame = +2

Query: 110 DEDSLREQLSKTEEEIITLRQVLNVKLKLAQDLKRQLGITVINEMKGDII---HGINT-- 274
           +E+ LR +L+K EEEI+TLRQVL  K +   +LKR+LG++ + E+K ++    H +    
Sbjct: 45  EEEELRAELTKVEEEIVTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQVSS 104

Query: 275 ---------------IKESNTFKATTNVMKNVKDXXXXXXXXXXXXXXQKIGLLRNTNTF 409
                          + +S+ +K T   +                   +K+G +RN+ TF
Sbjct: 105 AYVKTSEKLGEWNEKVTQSDLYKKTQETLSQAGQKTSAALSTVGSAISRKLGDMRNSATF 164

Query: 410 KSIEGKMGTAYTSVKTKLTNSKSTNDD 490
           KS E ++GT    +K+K+   +    D
Sbjct: 165 KSFEDRVGT----IKSKVVGDRENGSD 187
>sp|Q5RCT1|TPD54_PONPY Tumor protein D54 (Tumor protein D52-like 2)
          Length = 206

 Score = 63.9 bits (154), Expect = 4e-10
 Identities = 40/147 (27%), Positives = 69/147 (46%), Gaps = 20/147 (13%)
 Frame = +2

Query: 110 DEDSLREQLSKTEEEIITLRQVLNVKLKLAQDLKRQLGITVINEMKGDIIHGINTIKESN 289
           +E+ LR +L+K EEEI+TLRQVL  K +   +LKR+LG++ +  +K ++    + ++ SN
Sbjct: 45  EEEELRAELTKVEEEIVTLRQVLAAKERHCGELKRRLGLSTLGGLKQNLSRSWHDVQVSN 104

Query: 290 TF--------------------KATTNVMKNVKDXXXXXXXXXXXXXXQKIGLLRNTNTF 409
            +                    K T   +                   +K+G +RN+ TF
Sbjct: 105 AYVKTSEKLGEWNEKVTQSDLYKKTQETLSQAGQKTSAALSTMGSAISRKLGDMRNSATF 164

Query: 410 KSIEGKMGTAYTSVKTKLTNSKSTNDD 490
           KS E ++GT    +K+K+   +    D
Sbjct: 165 KSFEDRVGT----IKSKVVGDRENGSD 187
>sp|Q9I8F4|TPD53_CHICK Tumor protein D53 homolog (Tumor protein D52-like 1)
          Length = 210

 Score = 63.2 bits (152), Expect = 6e-10
 Identities = 39/146 (26%), Positives = 72/146 (49%), Gaps = 18/146 (12%)
 Frame = +2

Query: 110 DEDSLREQLSKTEEEIITLRQVLNVKLKLAQDLKRQLGITVINEMKGDIIHGINTIKESN 289
           +++ L+ +L+K E+EI TLRQVL  K K   ++K++LG++++NE+K +     + ++ ++
Sbjct: 35  EKEELKAELAKLEDEISTLRQVLAAKEKHLIEIKQKLGMSLMNELKQNFSKSWHDMQTTS 94

Query: 290 TFKATTNVMKNVKDXXXXXXXXXXXXXXQKIG------------------LLRNTNTFKS 415
            +K T   + +                 +K G                   +RN+ TFKS
Sbjct: 95  AYKKTHETLSHAGQKATAAISNVGTAISKKFGDMRSHSISYSIRHSISMPAMRNSPTFKS 154

Query: 416 IEGKMGTAYTSVKTKLTNSKSTNDDY 493
            E K+ T  TS+KTK+  +  T   +
Sbjct: 155 FEEKVETTVTSLKTKVGGTSHTGGSF 180
>sp|Q6PCT3|TPD54_RAT Tumor protein D54 (Tumor protein D52-like 2)
          Length = 220

 Score = 59.7 bits (143), Expect = 7e-09
 Identities = 44/187 (23%), Positives = 83/187 (44%), Gaps = 34/187 (18%)
 Frame = +2

Query: 107 IDEDSLREQLSKTEEEIITLRQVLNVKLKLAQDLKRQLGITVINEMKGDIIHGINTIK-- 280
           ++E+ LR +L+K EEEI+TLRQVL  K +   +LKR+LG++ + E+K ++    + ++  
Sbjct: 44  VEEEELRAELAKVEEEIVTLRQVLAAKERHCGELKRRLGLSTLGELKQNLSRSWHDVQGS 103

Query: 281 ------------------ESNTFKATTNVMKNVKDXXXXXXXXXXXXXXQKIG------- 385
                             +S+ +K T   +                   +K+G       
Sbjct: 104 TAYVKTSEKLGEWNEKVTQSDLYKKTQETLSQAGQKTSAALSTMGSAISRKLGDMSSYSI 163

Query: 386 -------LLRNTNTFKSIEGKMGTAYTSVKTKLTNSKSTNDDYVIDENEISHNNGLDDNS 544
                  ++RN+ TFKS E ++GT    +K+K+   +    D       +  + G  D +
Sbjct: 164 RHSISMPVMRNSATFKSFEDRVGT----IKSKVVGGRENGSD------TLPSSPGSGDQT 213

Query: 545 KPNNS*F 565
            P+++ F
Sbjct: 214 LPDHAPF 220
>sp|Q16890|TPD53_HUMAN Tumor protein D53 (hD53) (Tumor protein D52-like 1)
          Length = 204

 Score = 59.3 bits (142), Expect = 9e-09
 Identities = 35/131 (26%), Positives = 67/131 (51%), Gaps = 13/131 (9%)
 Frame = +2

Query: 110 DEDSLREQLSKTEEEIITLRQVLNVKLKLAQDLKRQLGITVINEMKGDIIHGINTIKESN 289
           +++ L+ +L + E+EI TLRQVL+ K +   ++K++LG+ ++NE+K +     + ++ + 
Sbjct: 35  EKEELKAELVQLEDEITTLRQVLSAKERHLVEIKQKLGMNLMNELKQNFSKSWHDMQTTT 94

Query: 290 TFKATTNVMKNVKDXXXXXXXXXXXXXXQKIG-------------LLRNTNTFKSIEGKM 430
            +K T   + +                 +K G              +RN+ TFKS E ++
Sbjct: 95  AYKKTHETLSHAGQKATAAFSNVGTAISKKFGDMSYSIRHSISMPAMRNSPTFKSFEERV 154

Query: 431 GTAYTSVKTKL 463
            T  TS+KTK+
Sbjct: 155 ETTVTSLKTKV 165
>sp|O54818|TPD53_MOUSE Tumor protein D53 (mD53) (Tumor protein D52-like 1)
          Length = 204

 Score = 59.3 bits (142), Expect = 9e-09
 Identities = 36/150 (24%), Positives = 72/150 (48%), Gaps = 13/150 (8%)
 Frame = +2

Query: 110 DEDSLREQLSKTEEEIITLRQVLNVKLKLAQDLKRQLGITVINEMKGDIIHGINTIKESN 289
           +++ L+ +L + E+EI TLRQVL+ K +   ++K++LG+ ++NE+K +     + ++ + 
Sbjct: 35  EKEELKAELIQLEDEITTLRQVLSAKERHLVEIKQKLGMNLMNELKQNFSRSWHDMQTTT 94

Query: 290 TFKATTNVMKNVKDXXXXXXXXXXXXXXQKIG-------------LLRNTNTFKSIEGKM 430
            +K T   + +                 +K G              +RN++TFKS E ++
Sbjct: 95  AYKKTHETLSHAGQKATAAFNNVGTAISKKFGDMRYSIRHSISMPAMRNSSTFKSFEERV 154

Query: 431 GTAYTSVKTKLTNSKSTNDDYVIDENEISH 520
            T   S+KTK+  +      +    N  +H
Sbjct: 155 ETTVASLKTKVGGTNHGGGSFEEVLNSTAH 184
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 64,963,963
Number of Sequences: 369166
Number of extensions: 1123627
Number of successful extensions: 3991
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 3637
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3896
length of database: 68,354,980
effective HSP length: 107
effective length of database: 48,588,335
effective search space used: 5830600200
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)