Planaria EST Database


DrC_01872

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_01872
         (942 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|P34422|YL31_CAEEL  Hypothetical protein F44B9.1 in chromo...    57   1e-07
sp|P39839|YUXL_BACSU  Probable peptidase yuxL                      55   2e-07
sp|P13676|ACPH_RAT  Acylamino-acid-releasing enzyme (AARE) (...    47   6e-05
sp|P13798|ACPH_HUMAN  Acylamino-acid-releasing enzyme (AARE)...    46   1e-04
sp|P19205|ACPH_PIG  Acylamino-acid-releasing enzyme (AARE) (...    46   2e-04
sp|Q8R146|APEH_MOUSE  Acylamino-acid-releasing enzyme (AARE)...    45   2e-04
sp|Q9YBQ2|APEH_AERPE  Acylamino-acid-releasing enzyme (AARE)...    42   0.002
sp|Q9UW98|DPP5_TRIRU  Dipeptidyl-peptidase V precursor (DPP ...    41   0.004
sp|O13479|DPP5_ASPFU  Dipeptidyl-peptidase V precursor (DPP ...    40   0.012
sp|Q8J1M3|DPP5_ARTBE  Dipeptidyl-peptidase V precursor (DPP ...    37   0.062
>sp|P34422|YL31_CAEEL Hypothetical protein F44B9.1 in chromosome III
          Length = 740

 Score = 56.6 bits (135), Expect = 1e-07
 Identities = 27/83 (32%), Positives = 44/83 (53%)
 Frame = +2

Query: 692 LPDTLPPLLVLAHGGPTSAADLNLNLSIQYWTSRGFAVLDVDYRGSTGYGKEYRNLLKGN 871
           +P     ++VL HGGP +      +    + T+RG++VL V++RGSTG+GK   N   G 
Sbjct: 424 IPAVPQKMIVLVHGGPKARDHYGFSPMNAWLTNRGYSVLQVNFRGSTGFGKRLTNAGNGE 483

Query: 872 WGIFDKVDCCEGANYLVSQKLVD 940
           WG     D  +   + VS+ + +
Sbjct: 484 WGRKMHFDILDAVEFAVSKGIAN 506
>sp|P39839|YUXL_BACSU Probable peptidase yuxL
          Length = 657

 Score = 55.5 bits (132), Expect = 2e-07
 Identities = 49/221 (22%), Positives = 93/221 (42%), Gaps = 10/221 (4%)
 Frame = +2

Query: 296 IGG----PMWSLDYRTYYY---HEGENLLILAKAGGQLQIMKTDGSIERTLQLNPHITSI 454
           IGG    P+W+ D + +Y     +G   +      G +  ++ +     +  L+P     
Sbjct: 301 IGGAEQRPIWTKDSQGFYVIGTDQGSTGIYYISIEGLVYPIRLEKEYINSFSLSP----- 355

Query: 455 AYPYLMQDGSIVVIGGSPDSSKTIYRI-FGDDKYEIVG-RDRIVEGIDPHYFSIPQRLNY 628
                  +   +     PD    +Y I  G ++ ++ G  D+ V     H  SIP+ + Y
Sbjct: 356 ------DEQHFIASVTKPDRPSELYSIPLGQEEKQLTGANDKFVR---EHTISIPEEIQY 406

Query: 629 PVPGGISY-AYYYPPCNPDYCGLPDTLPPLLVLAHGGPTSAADLNLNLSIQYWTSRGFAV 805
               G+    +   P   +     +T  PL++  HGGP            Q   ++G+AV
Sbjct: 407 ATEDGVMVNGWLMRPAQME----GETTYPLILNIHGGPHMMYGHTYFHEFQVLAAKGYAV 462

Query: 806 LDVDYRGSTGYGKEYRNLLKGNWGIFDKVDCCEGANYLVSQ 928
           + ++ RGS GYG+E+ N ++G++G  D  D  +  +  + +
Sbjct: 463 VYINPRGSHGYGQEFVNAVRGDYGGKDYDDVMQAVDEAIKR 503
>sp|P13676|ACPH_RAT Acylamino-acid-releasing enzyme (AARE) (Acyl-peptide hydrolase)
           (APH) (Acylaminoacyl-peptidase)
          Length = 732

 Score = 47.4 bits (111), Expect = 6e-05
 Identities = 33/77 (42%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
 Frame = +2

Query: 668 PCNPDYCGLPD-TLPPLLVLAHGGPTSAADLNLNLSIQYWTSRGFAVLDVDYRGSTGYGK 844
           P NP     PD T  P++V+ HGGP S+      L        GFAVL V+YRGSTG+G+
Sbjct: 491 PSNP-----PDKTQVPMVVMPHGGPHSSFVTAWMLFPAMLCKMGFAVLLVNYRGSTGFGQ 545

Query: 845 EYRNLLKGNWGIFDKVD 895
           +    L GN G  D  D
Sbjct: 546 DSILSLPGNVGHQDVKD 562
>sp|P13798|ACPH_HUMAN Acylamino-acid-releasing enzyme (AARE) (Acyl-peptide hydrolase)
           (APH) (Acylaminoacyl-peptidase) (Oxidized protein
           hydrolase) (OPH) (DNF15S2 protein)
          Length = 732

 Score = 46.2 bits (108), Expect = 1e-04
 Identities = 30/68 (44%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
 Frame = +2

Query: 695 PD-TLPPLLVLAHGGPTSAADLNLNLSIQYWTSRGFAVLDVDYRGSTGYGKEYRNLLKGN 871
           PD T  P++V+ HGGP S+      L        GFAVL V+YRGSTG+G++    L GN
Sbjct: 495 PDKTQVPMVVMPHGGPHSSFVTAWMLFPAMLCKMGFAVLLVNYRGSTGFGQDSILSLPGN 554

Query: 872 WGIFDKVD 895
            G  D  D
Sbjct: 555 VGHQDVKD 562
>sp|P19205|ACPH_PIG Acylamino-acid-releasing enzyme (AARE) (Acyl-peptide hydrolase)
           (APH) (Acylaminoacyl-peptidase)
          Length = 732

 Score = 45.8 bits (107), Expect = 2e-04
 Identities = 28/65 (43%), Positives = 36/65 (55%)
 Frame = +2

Query: 701 TLPPLLVLAHGGPTSAADLNLNLSIQYWTSRGFAVLDVDYRGSTGYGKEYRNLLKGNWGI 880
           T  P++V+ HGGP S+      L        GFAVL V+YRGSTG+G++    L GN G 
Sbjct: 498 TQVPMVVMPHGGPHSSFVTAWMLFPAMLCKMGFAVLLVNYRGSTGFGQDSILSLPGNVGH 557

Query: 881 FDKVD 895
            D  D
Sbjct: 558 QDVKD 562
>sp|Q8R146|APEH_MOUSE Acylamino-acid-releasing enzyme (AARE) (Acyl-peptide hydrolase)
           (APH) (Acylaminoacyl-peptidase)
          Length = 732

 Score = 45.4 bits (106), Expect = 2e-04
 Identities = 27/62 (43%), Positives = 35/62 (56%)
 Frame = +2

Query: 710 PLLVLAHGGPTSAADLNLNLSIQYWTSRGFAVLDVDYRGSTGYGKEYRNLLKGNWGIFDK 889
           P++V+ HGGP S+      L        GFAVL V+YRGSTG+G++    L GN G  D 
Sbjct: 501 PMVVMPHGGPHSSFVTAWMLFPAMLCKMGFAVLLVNYRGSTGFGQDSILSLPGNVGHQDV 560

Query: 890 VD 895
            D
Sbjct: 561 KD 562
>sp|Q9YBQ2|APEH_AERPE Acylamino-acid-releasing enzyme (AARE) (Acyl-peptide hydrolase)
           (APH) (Acylaminoacyl-peptidase)
          Length = 582

 Score = 42.4 bits (98), Expect = 0.002
 Identities = 23/61 (37%), Positives = 34/61 (55%)
 Frame = +2

Query: 689 GLPDTLPPLLVLAHGGPTSAADLNLNLSIQYWTSRGFAVLDVDYRGSTGYGKEYRNLLKG 868
           G   T  P +VL HGGP +    + +       + GF V+  +YRGSTGYG+E+R  + G
Sbjct: 354 GRAPTPGPTVVLVHGGPFAEDSDSWDTFAASLAAAGFHVVMPNYRGSTGYGEEWRLKIIG 413

Query: 869 N 871
           +
Sbjct: 414 D 414
>sp|Q9UW98|DPP5_TRIRU Dipeptidyl-peptidase V precursor (DPP V) (DppV) (Allergen Tri r 4)
          Length = 726

 Score = 41.2 bits (95), Expect = 0.004
 Identities = 44/198 (22%), Positives = 83/198 (41%), Gaps = 9/198 (4%)
 Frame = +2

Query: 311 WSLDYRTYYYHEGENLLILAKAGGQLQIMKTDGSIERTLQLNPHITSIAYPYLMQDGSIV 490
           WS D RT Y    ++      A G+L  +  D        +  H  S++  Y +     V
Sbjct: 344 WSSDGRTLYVTAEDH------ATGKLFTLPADARDNHKPAVVKHDGSVSSFYFIGSSKSV 397

Query: 491 VIGGSPDSSKTIYRIFGDDK-----YEIVGRDRIVEGIDPHYFSIPQRLNYPVPGGIS-- 649
           +I G+   S  +Y++   D+     +     D  ++G+ P+           V G  +  
Sbjct: 398 LISGNSLWSNALYQVATPDRPNRKLFYANEHDPELKGLGPNDIE-----PLWVDGARTKI 452

Query: 650 YAYYYPPCNPDYCGLPDTLPPLLVLAHGGPTSAADLNLNL--SIQYWTSRGFAVLDVDYR 823
           +++   P   D     + + PL  L HGGP  +   N +   + + W  +G+ V+  +  
Sbjct: 453 HSWIVKPTGFD----KNKVYPLAFLIHGGPQGSWGDNWSTRWNPRVWADQGYVVVAPNPT 508

Query: 824 GSTGYGKEYRNLLKGNWG 877
           GSTG+G++  + +  +WG
Sbjct: 509 GSTGFGQKLTDDITNDWG 526
>sp|O13479|DPP5_ASPFU Dipeptidyl-peptidase V precursor (DPP V) (DppV)
          Length = 721

 Score = 39.7 bits (91), Expect = 0.012
 Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 5/70 (7%)
 Frame = +2

Query: 710 PLLVLAHGGPTS--AADLNLNLSIQYWTSRGFAVLDVDYRGSTGYGKEYRNLLKGNWG-- 877
           PL+   HGGP    A   +   + + W  +G+ V+  +  GSTG+G+     ++ NWG  
Sbjct: 471 PLIFFIHGGPQGNWADGWSTRWNPKAWADQGYVVVAPNPTGSTGFGQALTTAIQNNWGGA 530

Query: 878 -IFDKVDCCE 904
              D V C E
Sbjct: 531 PYDDLVKCWE 540
>sp|Q8J1M3|DPP5_ARTBE Dipeptidyl-peptidase V precursor (DPP V) (DppV) (Allergen Tri m 4)
          Length = 726

 Score = 37.4 bits (85), Expect = 0.062
 Identities = 42/198 (21%), Positives = 80/198 (40%), Gaps = 9/198 (4%)
 Frame = +2

Query: 311 WSLDYRTYYYHEGENLLILAKAGGQLQIMKTDGSIERTLQLNPHITSIAYPYLMQDGSIV 490
           WS D RT Y    ++      A G+L  +  D        +  H  S++  Y +     V
Sbjct: 344 WSSDGRTLYVTAEDH------ATGKLFTLPADARDNHKPSVVKHDGSVSSFYFIGSSKSV 397

Query: 491 VIGGSPDSSKTIYRIFGDDK-----YEIVGRDRIVEGIDPHYFSIPQRLNYPVPGGIS-- 649
           +I G+   S  +Y++    +     +     D  ++G+ P            V G  +  
Sbjct: 398 LISGNSLWSNALYQVATPGRPNRKLFYANEHDPELKGLGPKDIE-----PLWVDGARTKI 452

Query: 650 YAYYYPPCNPDYCGLPDTLPPLLVLAHGGPTSA--ADLNLNLSIQYWTSRGFAVLDVDYR 823
           +++   P   D     + + PL  L HGGP  +     +   + + W  +G+ V+  +  
Sbjct: 453 HSWIVKPTGFD----KNKVYPLAFLIHGGPQGSWGDSWSTRWNPRVWADQGYVVVAPNPT 508

Query: 824 GSTGYGKEYRNLLKGNWG 877
           GSTG+G++  + +  +WG
Sbjct: 509 GSTGFGQKLTDDITNDWG 526
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 119,076,380
Number of Sequences: 369166
Number of extensions: 2669616
Number of successful extensions: 6788
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 6503
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6784
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 9750928390
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)