Planaria EST Database


DrC_01848

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_01848
         (869 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q8YV57|Y2124_ANASP  Hypothetical WD-repeat protein all2124      87   6e-17
sp|Q8YTC2|Y2800_ANASP  Hypothetical WD-repeat protein alr2800      80   6e-15
sp|Q8YRI1|YY46_ANASP  Hypothetical WD-repeat protein alr3466       77   6e-14
sp|Q00808|HETE1_PODAN  Vegetatible incompatibility protein H...    74   5e-13
sp|P49695|PKWA_THECU  Probable serine/threonine-protein kina...    72   2e-12
sp|Q15542|TAF5_HUMAN  Transcription initiation factor TFIID ...    71   3e-12
sp|Q8C092|TAF5_MOUSE  Transcription initiation factor TFIID ...    71   4e-12
sp|P74442|Y143_SYNY3  Hypothetical WD-repeat protein slr0143       70   1e-11
sp|Q9C1X1|PWP2_SCHPO  Periodic tryptophan protein 2 homolog        69   1e-11
sp|O43017|SWD3_SCHPO  Set1 complex component swd3 (Set1C com...    69   2e-11
>sp|Q8YV57|Y2124_ANASP Hypothetical WD-repeat protein all2124
          Length = 1683

 Score = 87.0 bits (214), Expect = 6e-17
 Identities = 55/241 (22%), Positives = 106/241 (43%), Gaps = 14/241 (5%)
 Frame = +3

Query: 12   DAHKKGVTAVAATSDCKKIVSGGGEGQVRVWRIEECKVSQPNSIPHSHGVRKK--ASNVK 185
            + H+  V +++ + D K + S   +  +++WRI + K+ +     H+  V     +S+ K
Sbjct: 1236 NGHQDWVNSLSFSPDGKTLASASADKTIKLWRIADGKLVKTLK-GHNDSVWDVNFSSDGK 1294

Query: 186  SVVYVAHMET------------AMKEHANAVSCIRMNKDDTQCVSSSADGTCIIWCLIKY 329
            ++   +   T                H+  V  +    D     S+S D T  +W     
Sbjct: 1295 AIASASRDNTIKLWNRHGIELETFTGHSGGVYAVNFLPDSNIIASASLDNTIRLWQRPLI 1354

Query: 330  TRKQIMFANTLFRCVCWRPDECQIITSGTDRKIGYWEVYDGSLIRELEGSRSGSVNGMDI 509
            +  +++  N+    V +  D   I T+G D  I  W   DGSL++ L G+++  + G+  
Sbjct: 1355 SPLEVLAGNSGVYAVSFLHDGSIIATAGADGNIQLWHSQDGSLLKTLPGNKA--IYGISF 1412

Query: 510  TSDGDIFVTGGDDKIVKVWKYNEGFVTHVGLGHSMPITRLRISPDRQLITTVSEDGAIYF 689
            T  GD+  +   DK VK+W+  +G      +GH   + ++  SPD + + + S D  +  
Sbjct: 1413 TPQGDLIASANADKTVKIWRVRDGKALKTLIGHDNEVNKVNFSPDGKTLASASRDNTVKL 1472

Query: 690  W 692
            W
Sbjct: 1473 W 1473

 Score = 78.6 bits (192), Expect = 2e-14
 Identities = 61/242 (25%), Positives = 109/242 (45%), Gaps = 15/242 (6%)
 Frame = +3

Query: 15   AHKKGVTAVAATSDCKKIVSGGGEGQVRVWRIEE---CKVSQPNSIPHS-----HGVRKK 170
            A   GV AV+   D   I + G +G +++W  ++    K    N   +       G    
Sbjct: 1361 AGNSGVYAVSFLHDGSIIATAGADGNIQLWHSQDGSLLKTLPGNKAIYGISFTPQGDLIA 1420

Query: 171  ASNVKSVVYVAHMET--AMKE---HANAVSCIRMNKDDTQCVSSSADGTCIIWCLIKYTR 335
            ++N    V +  +    A+K    H N V+ +  + D     S+S D T  +W +     
Sbjct: 1421 SANADKTVKIWRVRDGKALKTLIGHDNEVNKVNFSPDGKTLASASRDNTVKLWNVSDGKF 1480

Query: 336  KQIMFANT--LFRCVCWRPDECQIITSGTDRKIGYWEVYDGSLIRELEGSRSGSVNGMDI 509
            K+ +  +T  +F  V + PD   I ++  D+ I  W+ + G+LI+ L  + +  V  ++ 
Sbjct: 1481 KKTLKGHTDEVF-WVSFSPDGKIIASASADKTIRLWDSFSGNLIKSLP-AHNDLVYSVNF 1538

Query: 510  TSDGDIFVTGGDDKIVKVWKYNEGFVTHVGLGHSMPITRLRISPDRQLITTVSEDGAIYF 689
              DG +  +   DK VK+W+ ++G + H   GHS  +     SPD + I + SED  +  
Sbjct: 1539 NPDGSMLASTSADKTVKLWRSHDGHLLHTFSGHSNVVYSSSFSPDGRYIASASEDKTVKI 1598

Query: 690  WK 695
            W+
Sbjct: 1599 WQ 1600

 Score = 72.4 bits (176), Expect = 2e-12
 Identities = 42/173 (24%), Positives = 75/173 (43%)
 Frame = +3

Query: 174  SNVKSVVYVAHMETAMKEHANAVSCIRMNKDDTQCVSSSADGTCIIWCLIKYTRKQIMFA 353
            + ++  ++       ++ H + V  I +++D     S S D T  +W       + +   
Sbjct: 1053 TTLQQALFEMQERNRLEGHKDGVISISISRDGQTIASGSLDKTIKLWSRDGRLFRTLNGH 1112

Query: 354  NTLFRCVCWRPDECQIITSGTDRKIGYWEVYDGSLIRELEGSRSGSVNGMDITSDGDIFV 533
                  V + PD   I + G+D+ I  W+  DG+L++ + G    +VN +  + DG    
Sbjct: 1113 EDAVYSVSFSPDGQTIASGGSDKTIKLWQTSDGTLLKTITGHEQ-TVNNVYFSPDGKNLA 1171

Query: 534  TGGDDKIVKVWKYNEGFVTHVGLGHSMPITRLRISPDRQLITTVSEDGAIYFW 692
            +   D  +K+W    G +     GHS  +  +R SPD Q I   SED  +  W
Sbjct: 1172 SASSDHSIKLWDTTSGQLLMTLTGHSAGVITVRFSPDGQTIAAGSEDKTVKLW 1224

 Score = 70.5 bits (171), Expect = 6e-12
 Identities = 55/251 (21%), Positives = 104/251 (41%), Gaps = 19/251 (7%)
 Frame = +3

Query: 12   DAHKKGVTAVAATSDCKKIVSGGGEGQVRVWRIE-----------ECKVSQPNSIPHSHG 158
            + H+  V +V+ + D + I SGG +  +++W+             E  V+     P    
Sbjct: 1110 NGHEDAVYSVSFSPDGQTIASGGSDKTIKLWQTSDGTLLKTITGHEQTVNNVYFSPDGKN 1169

Query: 159  VRKKASNVKSVVY---VAHMETAMKEHANAVSCIRMNKDDTQCVSSSADGTCIIWC---- 317
            +   +S+    ++      +   +  H+  V  +R + D     + S D T  +W     
Sbjct: 1170 LASASSDHSIKLWDTTSGQLLMTLTGHSAGVITVRFSPDGQTIAAGSEDKTVKLWHRQDG 1229

Query: 318  -LIKYTRKQIMFANTLFRCVCWRPDECQIITSGTDRKIGYWEVYDGSLIRELEGSRSGSV 494
             L+K       + N+L     + PD   + ++  D+ I  W + DG L++ L+G  + SV
Sbjct: 1230 KLLKTLNGHQDWVNSL----SFSPDGKTLASASADKTIKLWRIADGKLVKTLKG-HNDSV 1284

Query: 495  NGMDITSDGDIFVTGGDDKIVKVWKYNEGFVTHVGLGHSMPITRLRISPDRQLITTVSED 674
              ++ +SDG    +   D  +K+W    G       GHS  +  +   PD  +I + S D
Sbjct: 1285 WDVNFSSDGKAIASASRDNTIKLWN-RHGIELETFTGHSGGVYAVNFLPDSNIIASASLD 1343

Query: 675  GAIYFWKFPSV 707
              I  W+ P +
Sbjct: 1344 NTIRLWQRPLI 1354

 Score = 70.1 bits (170), Expect = 8e-12
 Identities = 54/244 (22%), Positives = 99/244 (40%), Gaps = 17/244 (6%)
 Frame = +3

Query: 12   DAHKKGVTAVAATSDCKKIVSGGGEGQVRVWRIE----------ECKVSQPNSIPHSHGV 161
            + HK GV +++ + D + I SG  +  +++W  +          E  V   +  P    +
Sbjct: 1069 EGHKDGVISISISRDGQTIASGSLDKTIKLWSRDGRLFRTLNGHEDAVYSVSFSPDGQTI 1128

Query: 162  RKKASNVKSVVYVAHMETAMKE---HANAVSCIRMNKDDTQCVSSSADGTCIIWCLIKYT 332
                S+    ++     T +K    H   V+ +  + D     S+S+D +  +W     T
Sbjct: 1129 ASGGSDKTIKLWQTSDGTLLKTITGHEQTVNNVYFSPDGKNLASASSDHSIKLW---DTT 1185

Query: 333  RKQIMFANTLFRC----VCWRPDECQIITSGTDRKIGYWEVYDGSLIRELEGSRSGSVNG 500
              Q++   T        V + PD   I     D+ +  W   DG L++ L G +   VN 
Sbjct: 1186 SGQLLMTLTGHSAGVITVRFSPDGQTIAAGSEDKTVKLWHRQDGKLLKTLNGHQDW-VNS 1244

Query: 501  MDITSDGDIFVTGGDDKIVKVWKYNEGFVTHVGLGHSMPITRLRISPDRQLITTVSEDGA 680
            +  + DG    +   DK +K+W+  +G +     GH+  +  +  S D + I + S D  
Sbjct: 1245 LSFSPDGKTLASASADKTIKLWRIADGKLVKTLKGHNDSVWDVNFSSDGKAIASASRDNT 1304

Query: 681  IYFW 692
            I  W
Sbjct: 1305 IKLW 1308

 Score = 69.3 bits (168), Expect = 1e-11
 Identities = 60/254 (23%), Positives = 101/254 (39%), Gaps = 16/254 (6%)
 Frame = +3

Query: 24   KGVTAVAATSDCKKIVSGGGEGQVRVWRIEECKVSQPNSIPHSHGVRK-----------K 170
            K +  ++ T     I S   +  V++WR+ + K  +   I H + V K            
Sbjct: 1405 KAIYGISFTPQGDLIASANADKTVKIWRVRDGKALK-TLIGHDNEVNKVNFSPDGKTLAS 1463

Query: 171  ASNVKSV----VYVAHMETAMKEHANAVSCIRMNKDDTQCVSSSADGTCIIWCLIKYTR- 335
            AS   +V    V     +  +K H + V  +  + D     S+SAD T  +W        
Sbjct: 1464 ASRDNTVKLWNVSDGKFKKTLKGHTDEVFWVSFSPDGKIIASASADKTIRLWDSFSGNLI 1523

Query: 336  KQIMFANTLFRCVCWRPDECQIITSGTDRKIGYWEVYDGSLIRELEGSRSGSVNGMDITS 515
            K +   N L   V + PD   + ++  D+ +  W  +DG L+    G  S  V     + 
Sbjct: 1524 KSLPAHNDLVYSVNFNPDGSMLASTSADKTVKLWRSHDGHLLHTFSG-HSNVVYSSSFSP 1582

Query: 516  DGDIFVTGGDDKIVKVWKYNEGFVTHVGLGHSMPITRLRISPDRQLITTVSEDGAIYFWK 695
            DG    +  +DK VK+W+ +   +T +   H   +     SPD + + + S D     W+
Sbjct: 1583 DGRYIASASEDKTVKIWQIDGHLLTTLP-QHQAGVMSAIFSPDGKTLISGSLDTTTKIWR 1641

Query: 696  FPSV*LKEKILLTL 737
            F S   K   + TL
Sbjct: 1642 FDSQQAKTSQMNTL 1655

 Score = 58.5 bits (140), Expect = 2e-08
 Identities = 36/115 (31%), Positives = 57/115 (49%), Gaps = 1/115 (0%)
 Frame = +3

Query: 396  QIITSGT-DRKIGYWEVYDGSLIRELEGSRSGSVNGMDITSDGDIFVTGGDDKIVKVWKY 572
            Q I SG+ D+ I  W   DG L R L G    +V  +  + DG    +GG DK +K+W+ 
Sbjct: 1085 QTIASGSLDKTIKLWS-RDGRLFRTLNGHED-AVYSVSFSPDGQTIASGGSDKTIKLWQT 1142

Query: 573  NEGFVTHVGLGHSMPITRLRISPDRQLITTVSEDGAIYFWKFPSV*LKEKILLTL 737
            ++G +     GH   +  +  SPD + + + S D +I  W   S     ++L+TL
Sbjct: 1143 SDGTLLKTITGHEQTVNNVYFSPDGKNLASASSDHSIKLWDTTS----GQLLMTL 1193
>sp|Q8YTC2|Y2800_ANASP Hypothetical WD-repeat protein alr2800
          Length = 1258

 Score = 80.5 bits (197), Expect = 6e-15
 Identities = 44/156 (28%), Positives = 76/156 (48%), Gaps = 1/156 (0%)
 Frame = +3

Query: 228  HANAVSCIRMNKDDTQCVSSSADGTCIIWCLIKYTRKQIMFANTLF-RCVCWRPDECQII 404
            H + V  +  + D     S+S D T  +W +   T  Q +  +T + RCV + PD   + 
Sbjct: 725  HEHEVFSVAFHPDGETLASASGDKTIKLWDIQDGTCLQTLTGHTDWVRCVAFSPDGNTLA 784

Query: 405  TSGTDRKIGYWEVYDGSLIRELEGSRSGSVNGMDITSDGDIFVTGGDDKIVKVWKYNEGF 584
            +S  D  I  W+V  G  +R L+ S +G V  +  ++DG    +G  D+ +K+W Y+ G 
Sbjct: 785  SSAADHTIKLWDVSQGKCLRTLK-SHTGWVRSVAFSADGQTLASGSGDRTIKIWNYHTGE 843

Query: 585  VTHVGLGHSMPITRLRISPDRQLITTVSEDGAIYFW 692
                 +GH+  +  +  SPD +++ + S D  I  W
Sbjct: 844  CLKTYIGHTNSVYSIAYSPDSKILVSGSGDRTIKLW 879

 Score = 68.6 bits (166), Expect = 2e-11
 Identities = 50/243 (20%), Positives = 104/243 (42%), Gaps = 16/243 (6%)
 Frame = +3

Query: 12   DAHKKGVTAVAATSDCKKIVSGGGEGQVRVWRIEECKVSQP---------NSIPHSHGVR 164
            + H   +  +A + D + + S   +  VR+W I   +  Q            + H  G  
Sbjct: 975  EGHTDFIYGIAFSPDSQTLASASTDSSVRLWNISTGQCFQILLEHTDWVYAVVFHPQGKI 1034

Query: 165  KKASNVKSVVYVAHMETA-----MKEHANAVSCIRMNKDDTQCVSSSADGTCIIW--CLI 323
                +    V + ++ T      + EH++ +  +  + D     S+SAD +  +W  C  
Sbjct: 1035 IATGSADCTVKLWNISTGQCLKTLSEHSDKILGMAWSPDGQLLASASADQSVRLWDCCTG 1094

Query: 324  KYTRKQIMFANTLFRCVCWRPDECQIITSGTDRKIGYWEVYDGSLIRELEGSRSGSVNGM 503
            +        +N ++  + + P+   I T  TD+ +  W+   G  ++ L G  +  V  +
Sbjct: 1095 RCVGILRGHSNRVYSAI-FSPNGEIIATCSTDQTVKIWDWQQGKCLKTLTG-HTNWVFDI 1152

Query: 504  DITSDGDIFVTGGDDKIVKVWKYNEGFVTHVGLGHSMPITRLRISPDRQLITTVSEDGAI 683
              + DG I  +   D+ V++W  N G   H+ +GH+  ++ +  SPD +++ + S+D  +
Sbjct: 1153 AFSPDGKILASASHDQTVRIWDVNTGKCHHICIGHTHLVSSVAFSPDGEVVASGSQDQTV 1212

Query: 684  YFW 692
              W
Sbjct: 1213 RIW 1215

 Score = 62.4 bits (150), Expect = 2e-09
 Identities = 51/229 (22%), Positives = 92/229 (40%), Gaps = 3/229 (1%)
 Frame = +3

Query: 15   AHKKGVTAVAATSDCKKIVSGGGEGQVRVWRIE--ECKVSQPNSIPHSHGVRKKASNVKS 188
            +H   V +VA ++D + + SG G+  +++W     EC                    +K+
Sbjct: 808  SHTGWVRSVAFSADGQTLASGSGDRTIKIWNYHTGEC--------------------LKT 847

Query: 189  VVYVAHMETAMKEHANAVSCIRMNKDDTQCVSSSADGTCIIWCLIKYTRKQIMFANTLFR 368
             +           H N+V  I  + D    VS S D T  +W    +   + +  +T   
Sbjct: 848  YI----------GHTNSVYSIAYSPDSKILVSGSGDRTIKLWDCQTHICIKTLHGHTNEV 897

Query: 369  C-VCWRPDECQIITSGTDRKIGYWEVYDGSLIRELEGSRSGSVNGMDITSDGDIFVTGGD 545
            C V + PD   +     D+ +  W    G  ++   G+   ++  +  + D  I  +G +
Sbjct: 898  CSVAFSPDGQTLACVSLDQSVRLWNCRTGQCLKAWYGNTDWAL-PVAFSPDRQILASGSN 956

Query: 546  DKIVKVWKYNEGFVTHVGLGHSMPITRLRISPDRQLITTVSEDGAIYFW 692
            DK VK+W +  G       GH+  I  +  SPD Q + + S D ++  W
Sbjct: 957  DKTVKLWDWQTGKYISSLEGHTDFIYGIAFSPDSQTLASASTDSSVRLW 1005

 Score = 50.1 bits (118), Expect = 8e-06
 Identities = 29/103 (28%), Positives = 45/103 (43%)
 Frame = +3

Query: 384 PDECQIITSGTDRKIGYWEVYDGSLIRELEGSRSGSVNGMDITSDGDIFVTGGDDKIVKV 563
           P+   + T  TD  +  WEV  G L+    G  S  V  +  + DG+I  + G D+ VK+
Sbjct: 652 PEGQLLATCDTDCHVRVWEVKSGKLLLICRG-HSNWVRFVVFSPDGEILASCGADENVKL 710

Query: 564 WKYNEGFVTHVGLGHSMPITRLRISPDRQLITTVSEDGAIYFW 692
           W   +G       GH   +  +   PD + + + S D  I  W
Sbjct: 711 WSVRDGVCIKTLTGHEHEVFSVAFHPDGETLASASGDKTIKLW 753

 Score = 48.9 bits (115), Expect = 2e-05
 Identities = 36/163 (22%), Positives = 69/163 (42%), Gaps = 6/163 (3%)
 Frame = +3

Query: 228  HANAVSCIRMNKDDTQCVSSSADGTCIIW------CLIKYTRKQIMFANTLFRCVCWRPD 389
            H+N V  +  + D     S  AD    +W      C+   T  +    + +F  V + PD
Sbjct: 683  HSNWVRFVVFSPDGEILASCGADENVKLWSVRDGVCIKTLTGHE----HEVFS-VAFHPD 737

Query: 390  ECQIITSGTDRKIGYWEVYDGSLIRELEGSRSGSVNGMDITSDGDIFVTGGDDKIVKVWK 569
               + ++  D+ I  W++ DG+ ++ L G  +  V  +  + DG+   +   D  +K+W 
Sbjct: 738  GETLASASGDKTIKLWDIQDGTCLQTLTG-HTDWVRCVAFSPDGNTLASSAADHTIKLWD 796

Query: 570  YNEGFVTHVGLGHSMPITRLRISPDRQLITTVSEDGAIYFWKF 698
             ++G        H+  +  +  S D Q + + S D  I  W +
Sbjct: 797  VSQGKCLRTLKSHTGWVRSVAFSADGQTLASGSGDRTIKIWNY 839

 Score = 35.0 bits (79), Expect = 0.27
 Identities = 28/127 (22%), Positives = 53/127 (41%), Gaps = 6/127 (4%)
 Frame = +3

Query: 219  MKEHANAVSCIRMNKDDTQCVSSSADGTCIIW------CLIKYTRKQIMFANTLFRCVCW 380
            ++ H+N V     + +     + S D T  IW      CL   T       N +F  + +
Sbjct: 1100 LRGHSNRVYSAIFSPNGEIIATCSTDQTVKIWDWQQGKCLKTLTGH----TNWVFD-IAF 1154

Query: 381  RPDECQIITSGTDRKIGYWEVYDGSLIRELEGSRSGSVNGMDITSDGDIFVTGGDDKIVK 560
             PD   + ++  D+ +  W+V  G       G  +  V+ +  + DG++  +G  D+ V+
Sbjct: 1155 SPDGKILASASHDQTVRIWDVNTGKCHHICIG-HTHLVSSVAFSPDGEVVASGSQDQTVR 1213

Query: 561  VWKYNEG 581
            +W    G
Sbjct: 1214 IWNVKTG 1220

 Score = 33.9 bits (76), Expect = 0.60
 Identities = 16/69 (23%), Positives = 32/69 (46%)
 Frame = +3

Query: 486 GSVNGMDITSDGDIFVTGGDDKIVKVWKYNEGFVTHVGLGHSMPITRLRISPDRQLITTV 665
           G++     + +G +  T   D  V+VW+   G +  +  GHS  +  +  SPD +++ + 
Sbjct: 643 GNILSAAFSPEGQLLATCDTDCHVRVWEVKSGKLLLICRGHSNWVRFVVFSPDGEILASC 702

Query: 666 SEDGAIYFW 692
             D  +  W
Sbjct: 703 GADENVKLW 711

 Score = 32.7 bits (73), Expect = 1.3
 Identities = 40/183 (21%), Positives = 68/183 (37%), Gaps = 18/183 (9%)
 Frame = +3

Query: 18   HKKGVTAVAATSDCKKIVSGGGEGQVRVWRIEECKVSQPNSIPHSHGVRKKAS----NVK 185
            H   +  +A + D + + S   +  VR+W   +C   +   I   H  R  ++    N +
Sbjct: 1061 HSDKILGMAWSPDGQLLASASADQSVRLW---DCCTGRCVGILRGHSNRVYSAIFSPNGE 1117

Query: 186  SVVYVAHMETA-------------MKEHANAVSCIRMNKDDTQCVSSSADGTCIIWCLIK 326
             +   +  +T              +  H N V  I  + D     S+S D T  IW +  
Sbjct: 1118 IIATCSTDQTVKIWDWQQGKCLKTLTGHTNWVFDIAFSPDGKILASASHDQTVRIWDVNT 1177

Query: 327  YTRKQIMFANT-LFRCVCWRPDECQIITSGTDRKIGYWEVYDGSLIRELEGSRSGSVNGM 503
                 I   +T L   V + PD   + +   D+ +  W V  G  ++ L   R     GM
Sbjct: 1178 GKCHHICIGHTHLVSSVAFSPDGEVVASGSQDQTVRIWNVKTGECLQILRAKR--LYEGM 1235

Query: 504  DIT 512
            +IT
Sbjct: 1236 NIT 1238
>sp|Q8YRI1|YY46_ANASP Hypothetical WD-repeat protein alr3466
          Length = 1526

 Score = 77.0 bits (188), Expect = 6e-14
 Identities = 56/244 (22%), Positives = 103/244 (42%), Gaps = 15/244 (6%)
 Frame = +3

Query: 18   HKKGVTAVAATSDCKKIVSGGGEGQVRVWRIEECK--------VSQPNSI---PHSHGVR 164
            H   V AVA + D   + SG G+  VR+W I   K         S  NS+   P    + 
Sbjct: 1157 HTNWVNAVAFSPDGATLASGSGDQTVRLWDISSSKCLYILQGHTSWVNSVVFNPDGSTLA 1216

Query: 165  KKASNVKSVVYVAHMETAM---KEHANAVSCIRMNKDDTQCVSSSADGTCIIWCLIKYTR 335
              +S+    ++  +    +   + H + V+ +  N D +   S S+D T  +W +     
Sbjct: 1217 SGSSDQTVRLWEINSSKCLCTFQGHTSWVNSVVFNPDGSMLASGSSDKTVRLWDISSSKC 1276

Query: 336  KQIMFANTLF-RCVCWRPDECQIITSGTDRKIGYWEVYDGSLIRELEGSRSGSVNGMDIT 512
                  +T +   V + PD   + +   D+ +  WE+     +   +G  S  V+ +  +
Sbjct: 1277 LHTFQGHTNWVNSVAFNPDGSMLASGSGDQTVRLWEISSSKCLHTFQGHTSW-VSSVTFS 1335

Query: 513  SDGDIFVTGGDDKIVKVWKYNEGFVTHVGLGHSMPITRLRISPDRQLITTVSEDGAIYFW 692
             DG +  +G DD+ V++W  + G   +  LGH+  +  +  SPD  ++ + S D  +  W
Sbjct: 1336 PDGTMLASGSDDQTVRLWSISSGECLYTFLGHTNWVGSVIFSPDGAILASGSGDQTVRLW 1395

Query: 693  KFPS 704
               S
Sbjct: 1396 SISS 1399

 Score = 69.3 bits (168), Expect = 1e-11
 Identities = 59/261 (22%), Positives = 105/261 (40%), Gaps = 21/261 (8%)
 Frame = +3

Query: 18   HKKGVTAVAATSDCKKIVSGGGEGQVRVWRIEECK---------------VSQPNSIPHS 152
            H   V +V  + D K + SG  +  VR+W I   +               V  PNS+  +
Sbjct: 905  HNSWVNSVGFSQDGKMLASGSDDQTVRLWDISSGQCLKTFKGHTSRVRSVVFSPNSLMLA 964

Query: 153  HGVRKKASNVKSV-----VYVAHMETAMKEHANAVSCIRMNKDDTQCVSSSADGTCIIWC 317
             G   +   +  +     +Y+       + H   V  +  N D +   + S D T  +W 
Sbjct: 965  SGSSDQTVRLWDISSGECLYI------FQGHTGWVYSVAFNLDGSMLATGSGDQTVRLWD 1018

Query: 318  LIKYTRKQIMFANT-LFRCVCWRPDECQIITSGTDRKIGYWEVYDGSLIRELEGSRSGSV 494
            +       I   +T   R V +  D   + +   D+ +  W++  G+ +  L+G  S  V
Sbjct: 1019 ISSSQCFYIFQGHTSCVRSVVFSSDGAMLASGSDDQTVRLWDISSGNCLYTLQGHTS-CV 1077

Query: 495  NGMDITSDGDIFVTGGDDKIVKVWKYNEGFVTHVGLGHSMPITRLRISPDRQLITTVSED 674
              +  + DG +  +GGDD+IV++W  + G   +   G++  +  L  SP+   +   S D
Sbjct: 1078 RSVVFSPDGAMLASGGDDQIVRLWDISSGNCLYTLQGYTSWVRFLVFSPNGVTLANGSSD 1137

Query: 675  GAIYFWKFPSV*LKEKILLTL 737
              +  W   S    +K L TL
Sbjct: 1138 QIVRLWDISS----KKCLYTL 1154

 Score = 69.3 bits (168), Expect = 1e-11
 Identities = 54/249 (21%), Positives = 94/249 (37%), Gaps = 16/249 (6%)
 Frame = +3

Query: 6    INDAHKKGVTAVAATSDCKKIVSGGGEGQVRVWRIEECK---------------VSQPNS 140
            I   H   V +V    D   + SG  +  VR+W I   K               V  P+ 
Sbjct: 1195 ILQGHTSWVNSVVFNPDGSTLASGSSDQTVRLWEINSSKCLCTFQGHTSWVNSVVFNPDG 1254

Query: 141  IPHSHGVRKKASNVKSVVYVAHMETAMKEHANAVSCIRMNKDDTQCVSSSADGTCIIWCL 320
               + G   K   +  +     + T  + H N V+ +  N D +   S S D T  +W +
Sbjct: 1255 SMLASGSSDKTVRLWDISSSKCLHT-FQGHTNWVNSVAFNPDGSMLASGSGDQTVRLWEI 1313

Query: 321  IKYTRKQIMFANTLF-RCVCWRPDECQIITSGTDRKIGYWEVYDGSLIRELEGSRSGSVN 497
                       +T +   V + PD   + +   D+ +  W +  G  +    G  +  V 
Sbjct: 1314 SSSKCLHTFQGHTSWVSSVTFSPDGTMLASGSDDQTVRLWSISSGECLYTFLG-HTNWVG 1372

Query: 498  GMDITSDGDIFVTGGDDKIVKVWKYNEGFVTHVGLGHSMPITRLRISPDRQLITTVSEDG 677
             +  + DG I  +G  D+ V++W  + G   +   GH+  +  +  SPD  L+ + S+D 
Sbjct: 1373 SVIFSPDGAILASGSGDQTVRLWSISSGKCLYTLQGHNNWVGSIVFSPDGTLLASGSDDQ 1432

Query: 678  AIYFWKFPS 704
             +  W   S
Sbjct: 1433 TVRLWNISS 1441

 Score = 67.8 bits (164), Expect = 4e-11
 Identities = 49/226 (21%), Positives = 85/226 (37%), Gaps = 1/226 (0%)
 Frame = +3

Query: 18   HKKGVTAVAATSDCKKIVSGGGEGQVRVWRIEECKVSQPNSIPHSHGVRKKASNVKSVVY 197
            H   V +VA   D   + SG G+  VR+W I   K                         
Sbjct: 1283 HTNWVNSVAFNPDGSMLASGSGDQTVRLWEISSSKCLH---------------------- 1320

Query: 198  VAHMETAMKEHANAVSCIRMNKDDTQCVSSSADGTCIIWCLIKYTRKQIMFANTLF-RCV 374
                    + H + VS +  + D T   S S D T  +W +           +T +   V
Sbjct: 1321 ------TFQGHTSWVSSVTFSPDGTMLASGSDDQTVRLWSISSGECLYTFLGHTNWVGSV 1374

Query: 375  CWRPDECQIITSGTDRKIGYWEVYDGSLIRELEGSRSGSVNGMDITSDGDIFVTGGDDKI 554
             + PD   + +   D+ +  W +  G  +  L+G  +  V  +  + DG +  +G DD+ 
Sbjct: 1375 IFSPDGAILASGSGDQTVRLWSISSGKCLYTLQGHNNW-VGSIVFSPDGTLLASGSDDQT 1433

Query: 555  VKVWKYNEGFVTHVGLGHSMPITRLRISPDRQLITTVSEDGAIYFW 692
            V++W  + G   +   GH   +  +  S D  ++ + S+D  I  W
Sbjct: 1434 VRLWNISSGECLYTLHGHINSVRSVAFSSDGLILASGSDDETIKLW 1479

 Score = 60.1 bits (144), Expect = 8e-09
 Identities = 55/234 (23%), Positives = 91/234 (38%), Gaps = 1/234 (0%)
 Frame = +3

Query: 6    INDAHKKGVTAVAATSDCKKIVSGGGEGQVRVWRIEECKVSQPNSIPHSHGVRKKASNVK 185
            I   H   V +VA   D   + +G G+  VR+W I     SQ   I   H      S V+
Sbjct: 985  IFQGHTGWVYSVAFNLDGSMLATGSGDQTVRLWDISS---SQCFYIFQGH-----TSCVR 1036

Query: 186  SVVYVAHMETAMKEHANAVSCIRMNKDDTQCVSSSADGTCIIWCLIKYTRKQIMFANT-L 362
            SVV+                    + D     S S D T  +W +        +  +T  
Sbjct: 1037 SVVF--------------------SSDGAMLASGSDDQTVRLWDISSGNCLYTLQGHTSC 1076

Query: 363  FRCVCWRPDECQIITSGTDRKIGYWEVYDGSLIRELEGSRSGSVNGMDITSDGDIFVTGG 542
             R V + PD   + + G D+ +  W++  G+ +  L+G  S  V  +  + +G     G 
Sbjct: 1077 VRSVVFSPDGAMLASGGDDQIVRLWDISSGNCLYTLQGYTSW-VRFLVFSPNGVTLANGS 1135

Query: 543  DDKIVKVWKYNEGFVTHVGLGHSMPITRLRISPDRQLITTVSEDGAIYFWKFPS 704
             D+IV++W  +     +   GH+  +  +  SPD   + + S D  +  W   S
Sbjct: 1136 SDQIVRLWDISSKKCLYTLQGHTNWVNAVAFSPDGATLASGSGDQTVRLWDISS 1189

 Score = 50.8 bits (120), Expect = 5e-06
 Identities = 27/111 (24%), Positives = 49/111 (44%)
 Frame = +3

Query: 372  VCWRPDECQIITSGTDRKIGYWEVYDGSLIRELEGSRSGSVNGMDITSDGDIFVTGGDDK 551
            V + PD     T  +   + +WE   G  +   +G  S  VN +  + DG +  +G DD+
Sbjct: 870  VAFSPDGKLFATGDSGGIVRFWEAATGKELLTCKGHNSW-VNSVGFSQDGKMLASGSDDQ 928

Query: 552  IVKVWKYNEGFVTHVGLGHSMPITRLRISPDRQLITTVSEDGAIYFWKFPS 704
             V++W  + G       GH+  +  +  SP+  ++ + S D  +  W   S
Sbjct: 929  TVRLWDISSGQCLKTFKGHTSRVRSVVFSPNSLMLASGSSDQTVRLWDISS 979

 Score = 38.1 bits (87), Expect = 0.032
 Identities = 20/73 (27%), Positives = 34/73 (46%)
 Frame = +3

Query: 486  GSVNGMDITSDGDIFVTGGDDKIVKVWKYNEGFVTHVGLGHSMPITRLRISPDRQLITTV 665
            GSV  +  + DG +F TG    IV+ W+   G       GH+  +  +  S D +++ + 
Sbjct: 865  GSVLTVAFSPDGKLFATGDSGGIVRFWEAATGKELLTCKGHNSWVNSVGFSQDGKMLASG 924

Query: 666  SEDGAIYFWKFPS 704
            S+D  +  W   S
Sbjct: 925  SDDQTVRLWDISS 937
>sp|Q00808|HETE1_PODAN Vegetatible incompatibility protein HET-E-1
          Length = 1356

 Score = 73.9 bits (180), Expect = 5e-13
 Identities = 60/242 (24%), Positives = 100/242 (41%), Gaps = 15/242 (6%)
 Frame = +3

Query: 12   DAHKKGVTAVAATSDCKKIVSGGGEGQVRVWRIEECKVSQP--------NSIPHSHGVRK 167
            + H   V +VA + D +++ SG  +  +++W       +Q          S+  S   ++
Sbjct: 1006 EGHGGSVWSVAFSPDGQRVASGSDDKTIKIWDTASGTCTQTLEGHGGWVQSVVFSPDGQR 1065

Query: 168  KASN-----VKSVVYVAHMETAMKE-HANAVSCIRMNKDDTQCVSSSADGTCIIWCLIKY 329
             AS      +K    V+   T   E H ++V  +  + D  +  S S DGT  IW     
Sbjct: 1066 VASGSDDHTIKIWDAVSGTCTQTLEGHGDSVWSVAFSPDGQRVASGSIDGTIKIWDAASG 1125

Query: 330  TRKQIMFANTLF-RCVCWRPDECQIITSGTDRKIGYWEVYDGSLIRELEGSRSGSVNGMD 506
            T  Q +  +  +   V + PD  ++ +   D  I  W+   G+  + LEG   G V  + 
Sbjct: 1126 TCTQTLEGHGGWVHSVAFSPDGQRVASGSIDGTIKIWDAASGTCTQTLEG-HGGWVQSVA 1184

Query: 507  ITSDGDIFVTGGDDKIVKVWKYNEGFVTHVGLGHSMPITRLRISPDRQLITTVSEDGAIY 686
             + DG    +G  DK +K+W    G  T    GH   +  +  SPD Q + + S D  I 
Sbjct: 1185 FSPDGQRVASGSSDKTIKIWDTASGTCTQTLEGHGGWVQSVAFSPDGQRVASGSSDNTIK 1244

Query: 687  FW 692
             W
Sbjct: 1245 IW 1246

 Score = 73.6 bits (179), Expect = 7e-13
 Identities = 58/242 (23%), Positives = 100/242 (41%), Gaps = 15/242 (6%)
 Frame = +3

Query: 12   DAHKKGVTAVAATSDCKKIVSGGGEGQVRVWRIEECKVSQP--------NSIPHSHGVRK 167
            + H   V +VA + D +++ SG  +  +++W       +Q          S+  S   ++
Sbjct: 880  EGHGGSVWSVAFSPDRERVASGSDDKTIKIWDAASGTCTQTLEGHGGRVQSVAFSPDGQR 939

Query: 168  KASNVKS---VVYVAHMETA---MKEHANAVSCIRMNKDDTQCVSSSADGTCIIWCLIKY 329
             AS        ++ A   T    ++ H ++V  +  + D  +  S S D T  IW     
Sbjct: 940  VASGSDDHTIKIWDAASGTCTQTLEGHGSSVLSVAFSPDGQRVASGSGDKTIKIWDTASG 999

Query: 330  TRKQIMFANT-LFRCVCWRPDECQIITSGTDRKIGYWEVYDGSLIRELEGSRSGSVNGMD 506
            T  Q +  +      V + PD  ++ +   D+ I  W+   G+  + LEG   G V  + 
Sbjct: 1000 TCTQTLEGHGGSVWSVAFSPDGQRVASGSDDKTIKIWDTASGTCTQTLEG-HGGWVQSVV 1058

Query: 507  ITSDGDIFVTGGDDKIVKVWKYNEGFVTHVGLGHSMPITRLRISPDRQLITTVSEDGAIY 686
             + DG    +G DD  +K+W    G  T    GH   +  +  SPD Q + + S DG I 
Sbjct: 1059 FSPDGQRVASGSDDHTIKIWDAVSGTCTQTLEGHGDSVWSVAFSPDGQRVASGSIDGTIK 1118

Query: 687  FW 692
             W
Sbjct: 1119 IW 1120

 Score = 58.2 bits (139), Expect = 3e-08
 Identities = 42/194 (21%), Positives = 76/194 (39%), Gaps = 1/194 (0%)
 Frame = +3

Query: 12   DAHKKGVTAVAATSDCKKIVSGGGEGQVRVWRIEECKVSQPNSIPHSHGVRKKASNVKSV 191
            + H   V +VA + D +++ SG  +G +++W       +Q                    
Sbjct: 1090 EGHGDSVWSVAFSPDGQRVASGSIDGTIKIWDAASGTCTQ-------------------- 1129

Query: 192  VYVAHMETAMKEHANAVSCIRMNKDDTQCVSSSADGTCIIWCLIKYTRKQIMFANTLF-R 368
                     ++ H   V  +  + D  +  S S DGT  IW     T  Q +  +  + +
Sbjct: 1130 --------TLEGHGGWVHSVAFSPDGQRVASGSIDGTIKIWDAASGTCTQTLEGHGGWVQ 1181

Query: 369  CVCWRPDECQIITSGTDRKIGYWEVYDGSLIRELEGSRSGSVNGMDITSDGDIFVTGGDD 548
             V + PD  ++ +  +D+ I  W+   G+  + LEG   G V  +  + DG    +G  D
Sbjct: 1182 SVAFSPDGQRVASGSSDKTIKIWDTASGTCTQTLEG-HGGWVQSVAFSPDGQRVASGSSD 1240

Query: 549  KIVKVWKYNEGFVT 590
              +K+W    G  T
Sbjct: 1241 NTIKIWDTASGTCT 1254

 Score = 56.6 bits (135), Expect = 9e-08
 Identities = 31/107 (28%), Positives = 50/107 (46%)
 Frame = +3

Query: 372  VCWRPDECQIITSGTDRKIGYWEVYDGSLIRELEGSRSGSVNGMDITSDGDIFVTGGDDK 551
            V +  D  ++ +   D+ I  W+   G+  + LEG   GSV  +  + D +   +G DDK
Sbjct: 847  VAFSADGQRVASGSDDKTIKIWDTASGTGTQTLEG-HGGSVWSVAFSPDRERVASGSDDK 905

Query: 552  IVKVWKYNEGFVTHVGLGHSMPITRLRISPDRQLITTVSEDGAIYFW 692
             +K+W    G  T    GH   +  +  SPD Q + + S+D  I  W
Sbjct: 906  TIKIWDAASGTCTQTLEGHGGRVQSVAFSPDGQRVASGSDDHTIKIW 952

 Score = 48.1 bits (113), Expect = 3e-05
 Identities = 26/75 (34%), Positives = 38/75 (50%)
 Frame = +3

Query: 468  LEGSRSGSVNGMDITSDGDIFVTGGDDKIVKVWKYNEGFVTHVGLGHSMPITRLRISPDR 647
            LEG  S SV  +  ++DG    +G DDK +K+W    G  T    GH   +  +  SPDR
Sbjct: 837  LEGHGS-SVLSVAFSADGQRVASGSDDKTIKIWDTASGTGTQTLEGHGGSVWSVAFSPDR 895

Query: 648  QLITTVSEDGAIYFW 692
            + + + S+D  I  W
Sbjct: 896  ERVASGSDDKTIKIW 910
>sp|P49695|PKWA_THECU Probable serine/threonine-protein kinase pkwA
          Length = 742

 Score = 72.0 bits (175), Expect = 2e-12
 Identities = 56/245 (22%), Positives = 102/245 (41%), Gaps = 18/245 (7%)
 Frame = +3

Query: 12   DAHKKGVTAVAATSDCKKIVSGGGEGQVRVWRI---EECKVSQ------------PNSIP 146
            + H   V AVA + D   + SG  +  VR+W +   EE  V +            P+   
Sbjct: 498  EGHTDWVRAVAFSPDGALLASGSDDATVRLWDVAAAEERAVFEGHTHYVLDIAFSPDGSM 557

Query: 147  HSHGVRKKASNVKSVVYVAHMETAMKEHANAVSCIRMNKDDTQCVSSSADGTCIIWCLIK 326
             + G R   + + +V         +K H + V  +  + D +   S S DGT  +W +  
Sbjct: 558  VASGSRDGTARLWNVA-TGTEHAVLKGHTDYVYAVAFSPDGSMVASGSRDGTIRLWDVAT 616

Query: 327  YTRKQIMFA---NTLFRCVCWRPDECQIITSGTDRKIGYWEVYDGSLIRELEGSRSGSVN 497
               + ++ A   N +   + + PD   ++  G+D  +  W+V  G  +   EG  +  V 
Sbjct: 617  GKERDVLQAPAENVV--SLAFSPDGSMLV-HGSDSTVHLWDVASGEALHTFEG-HTDWVR 672

Query: 498  GMDITSDGDIFVTGGDDKIVKVWKYNEGFVTHVGLGHSMPITRLRISPDRQLITTVSEDG 677
             +  + DG +  +G DD+ +++W            GH+ P+  +   P+   + + SEDG
Sbjct: 673  AVAFSPDGALLASGSDDRTIRLWDVAAQEEHTTLEGHTEPVHSVAFHPEGTTLASASEDG 732

Query: 678  AIYFW 692
             I  W
Sbjct: 733  TIRIW 737

 Score = 49.3 bits (116), Expect = 1e-05
 Identities = 28/107 (26%), Positives = 46/107 (42%)
 Frame = +3

Query: 372 VCWRPDECQIITSGTDRKIGYWEVYDGSLIRELEGSRSGSVNGMDITSDGDIFVTGGDDK 551
           V + P    +     D+ I  W+V  G  +  LEG  +  V  +  + DG +  +G DD 
Sbjct: 465 VAFSPGGSLLAGGSGDKLIHVWDVASGDELHTLEG-HTDWVRAVAFSPDGALLASGSDDA 523

Query: 552 IVKVWKYNEGFVTHVGLGHSMPITRLRISPDRQLITTVSEDGAIYFW 692
            V++W         V  GH+  +  +  SPD  ++ + S DG    W
Sbjct: 524 TVRLWDVAAAEERAVFEGHTHYVLDIAFSPDGSMVASGSRDGTARLW 570
>sp|Q15542|TAF5_HUMAN Transcription initiation factor TFIID subunit 5 (Transcription
            initiation factor TFIID 100 kDa subunit) (TAF(II)100)
            (TAFII-100) (TAFII100)
          Length = 800

 Score = 71.2 bits (173), Expect = 3e-12
 Identities = 57/232 (24%), Positives = 90/232 (38%), Gaps = 9/232 (3%)
 Frame = +3

Query: 24   KGVTAVAATSDCKKIVSGGGEGQVRVWRIEECKVSQPNSIPHSHGVRKKASNVKSVVYVA 203
            +G+TAV  T D   I  G  +  VRVW +   K+           + K++ +V   +   
Sbjct: 471  QGLTAVDVTDDSSLIAGGFADSTVRVWSVTPKKLRSVKQASDLSLIDKESDDVLERIMDE 530

Query: 204  HMETAMK---EHANAVSCIRMNKDDTQCVSSSADGTCIIW------CLIKYTRKQIMFAN 356
               + +K    H+  V     + D    +SSS DGT  +W      CL+ Y        +
Sbjct: 531  KTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWD 590

Query: 357  TLFRCVCWRPDECQIITSGTDRKIGYWEVYDGSLIRELEGSRSGSVNGMDITSDGDIFVT 536
            T F      P     ++ G DR    W       +R   G  +  VN      + +   T
Sbjct: 591  TQFS-----PYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLA-DVNCTRFHPNSNYVAT 644

Query: 537  GGDDKIVKVWKYNEGFVTHVGLGHSMPITRLRISPDRQLITTVSEDGAIYFW 692
            G  D+ V++W    G    +  GH  PI  L  SP+ + + T + DG +  W
Sbjct: 645  GSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLW 696

 Score = 47.8 bits (112), Expect = 4e-05
 Identities = 28/120 (23%), Positives = 57/120 (47%), Gaps = 1/120 (0%)
 Frame = +3

Query: 228 HANAVSCIRMNKDDTQCVSSSADGTCIIWCLIKYTRKQIMFANT-LFRCVCWRPDECQII 404
           H   V+C R + +     + SAD T  +W ++     +I   +      + + P+   + 
Sbjct: 626 HLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLA 685

Query: 405 TSGTDRKIGYWEVYDGSLIRELEGSRSGSVNGMDITSDGDIFVTGGDDKIVKVWKYNEGF 584
           T  TD ++  W++  G ++ EL+G  + +V  +  + DG+I  +G  D  V++W   + F
Sbjct: 686 TGATDGRVLLWDIGHGLMVGELKG-HTDTVCSLRFSRDGEILASGSMDNTVRLWDAIKAF 744
>sp|Q8C092|TAF5_MOUSE Transcription initiation factor TFIID subunit 5 (Transcription
            initiation factor TFIID 100 kDa subunit) (TAF(II)100)
            (TAFII-100) (TAFII100)
          Length = 801

 Score = 70.9 bits (172), Expect = 4e-12
 Identities = 57/232 (24%), Positives = 90/232 (38%), Gaps = 9/232 (3%)
 Frame = +3

Query: 24   KGVTAVAATSDCKKIVSGGGEGQVRVWRIEECKVSQPNSIPHSHGVRKKASNVKSVVYVA 203
            +G+TAV  T D   I  G  +  VRVW +   K+           + K++ +V   +   
Sbjct: 472  QGLTAVDVTDDSSLIAGGFADSTVRVWSVTPKKLRSVKQASDLSLIDKESDDVLERIMDE 531

Query: 204  HMETAMK---EHANAVSCIRMNKDDTQCVSSSADGTCIIW------CLIKYTRKQIMFAN 356
               + +K    H+  V     + D    +SSS DGT  +W      CL+ Y        +
Sbjct: 532  KTASELKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWD 591

Query: 357  TLFRCVCWRPDECQIITSGTDRKIGYWEVYDGSLIRELEGSRSGSVNGMDITSDGDIFVT 536
            T F      P     ++ G DR    W       +R   G  +  VN      + +   T
Sbjct: 592  TQFS-----PYGYYFVSGGHDRVARLWATDHYQPLRIFAGHLA-DVNCTRYHPNSNYVAT 645

Query: 537  GGDDKIVKVWKYNEGFVTHVGLGHSMPITRLRISPDRQLITTVSEDGAIYFW 692
            G  D+ V++W    G    +  GH  PI  L  SP+ + + T + DG +  W
Sbjct: 646  GSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLATGATDGRVLLW 697

 Score = 47.4 bits (111), Expect = 5e-05
 Identities = 28/120 (23%), Positives = 57/120 (47%), Gaps = 1/120 (0%)
 Frame = +3

Query: 228 HANAVSCIRMNKDDTQCVSSSADGTCIIWCLIKYTRKQIMFANT-LFRCVCWRPDECQII 404
           H   V+C R + +     + SAD T  +W ++     +I   +      + + P+   + 
Sbjct: 627 HLADVNCTRYHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIHSLTFSPNGRFLA 686

Query: 405 TSGTDRKIGYWEVYDGSLIRELEGSRSGSVNGMDITSDGDIFVTGGDDKIVKVWKYNEGF 584
           T  TD ++  W++  G ++ EL+G  + +V  +  + DG+I  +G  D  V++W   + F
Sbjct: 687 TGATDGRVLLWDIGHGLMVGELKG-HTDTVCSLRFSRDGEILASGSMDNTVRLWDAVKAF 745
>sp|P74442|Y143_SYNY3 Hypothetical WD-repeat protein slr0143
          Length = 1191

 Score = 69.7 bits (169), Expect = 1e-11
 Identities = 42/156 (26%), Positives = 80/156 (51%), Gaps = 1/156 (0%)
 Frame = +3

Query: 228  HANAVSCIRMNKDDTQCVSSSADGTCIIWCLI-KYTRKQIMFANTLFRCVCWRPDECQII 404
            H + V+ + ++       S+S DGT  +W    ++ R+      +++R V + P+     
Sbjct: 559  HRDGVTSVAISSHKNLIASASRDGTVHLWTPQGEFLREFTGHTGSIYR-VDFSPNGKIFA 617

Query: 405  TSGTDRKIGYWEVYDGSLIRELEGSRSGSVNGMDITSDGDIFVTGGDDKIVKVWKYNEGF 584
            T+G D+ +  W++ DG+L++ L+G +  SV  +  + DG+I  +   D+ V++W +  G 
Sbjct: 618  TAGQDQTVKIWDL-DGNLLQTLKGHQD-SVYSVSFSPDGEILASTSRDRTVRLWHWRSGK 675

Query: 585  VTHVGLGHSMPITRLRISPDRQLITTVSEDGAIYFW 692
               V  GH+  +   + SPD Q + +V  DG I  W
Sbjct: 676  TLAVLGGHTKSVDDAQFSPDGQTLVSVCRDGQIRLW 711

 Score = 55.8 bits (133), Expect = 1e-07
 Identities = 57/250 (22%), Positives = 105/250 (42%), Gaps = 16/250 (6%)
 Frame = +3

Query: 18   HKKGVTAVAATSDCKKIVSGGGEGQVRVWR---------------IEECKVSQPNSIPHS 152
            H+ GVT+VA +S    I S   +G V +W                I     S    I  +
Sbjct: 559  HRDGVTSVAISSHKNLIASASRDGTVHLWTPQGEFLREFTGHTGSIYRVDFSPNGKIFAT 618

Query: 153  HGVRKKASNVKSVVYVAHMETAMKEHANAVSCIRMNKDDTQCVSSSADGTCIIWCLIKYT 332
             G   +   VK      ++   +K H ++V  +  + D     S+S D T  +W      
Sbjct: 619  AG---QDQTVKIWDLDGNLLQTLKGHQDSVYSVSFSPDGEILASTSRDRTVRLWHWRSGK 675

Query: 333  RKQIMFANTL-FRCVCWRPDECQIITSGTDRKIGYWEVYDGSLIRELEGSRSGSVNGMDI 509
               ++  +T       + PD   +++   D +I  W++ DG+LIR+  G    +  G++ 
Sbjct: 676  TLAVLGGHTKSVDDAQFSPDGQTLVSVCRDGQIRLWDL-DGNLIRQF-GLPEVAFFGVNW 733

Query: 510  TSDGDIFVTGGDDKIVKVWKYNEGFVTHVGLGHSMPITRLRISPDRQLITTVSEDGAIYF 689
              +G++     DD  V++W   +G +     GH   +TR+  +PD + + + S +G++  
Sbjct: 734  HPNGNLLAVAADDGTVRLWT-PQGEIKATLSGHDEFVTRVVFTPDGKQLFSSSSNGSVIH 792

Query: 690  WKFPSV*LKE 719
            W      LK+
Sbjct: 793  WSTSGKMLKK 802

 Score = 51.2 bits (121), Expect = 4e-06
 Identities = 30/109 (27%), Positives = 50/109 (45%)
 Frame = +3

Query: 366  RCVCWRPDECQIITSGTDRKIGYWEVYDGSLIRELEGSRSGSVNGMDITSDGDIFVTGGD 545
            R V   P   Q+        +  W  +DG+LIR +  +    +N +  + +G   ++ G 
Sbjct: 1001 RSVSLHPTLPQLAAGDEQGNLTLWN-FDGTLIRSIV-AHGDRLNQLQYSPNGKYLLSAGR 1058

Query: 546  DKIVKVWKYNEGFVTHVGLGHSMPITRLRISPDRQLITTVSEDGAIYFW 692
            +   K+W   EG + H      +PI ++ ISPD Q I T + DG +  W
Sbjct: 1059 EGTAKIWSV-EGQLLHTLKSDPLPIDQIAISPDSQWIATAASDGMVRLW 1106
>sp|Q9C1X1|PWP2_SCHPO Periodic tryptophan protein 2 homolog
          Length = 854

 Score = 69.3 bits (168), Expect = 1e-11
 Identities = 57/236 (24%), Positives = 98/236 (41%), Gaps = 10/236 (4%)
 Frame = +3

Query: 15  AHKKGVTAVAATSDCKKIVSGGGEGQVRVWRIEE--CKVSQPNSIPHSHGVRKKASNVKS 188
           +H   ++ +  +SD ++I++G  +G+++VW +    C V+                    
Sbjct: 337 SHYDALSTLQYSSDGQRIITGADDGKIKVWDMNSGFCIVT-------------------- 376

Query: 189 VVYVAHMETAMKEHANAVSCIRMNKDDTQCVSSSADGTCIIWCLIKYTRKQIMFA--NTL 362
                       +H +AVS +  +K      SSS DG+   W LI+Y   +   A     
Sbjct: 377 ----------FTQHTSAVSGLCFSKRGNVLFSSSLDGSVRAWDLIRYRNFRTFTAPSRVQ 426

Query: 363 FRCVCWRPDECQIITSGTDR--KIGYWEVYDGSLIRELEGSRSGSVNGMDITSDGDIFVT 536
           F C+   P   +I+ +G+    +I  W V  G L+  L G   G V+ +   S G +  +
Sbjct: 427 FSCIAVDPSG-EIVCAGSQDSFEIFMWSVQTGQLLETLAG-HEGPVSSLSFNSSGSLLAS 484

Query: 537 GGDDKIVKVWKYNEGFVTHVGLGHSMPI----TRLRISPDRQLITTVSEDGAIYFW 692
           G  DK V++W       +  G+   +PI      L   PD + +   S DG + FW
Sbjct: 485 GSWDKTVRIW----DIFSRSGIVEPLPIPSDVLSLAFHPDGKEVCVASLDGQLTFW 536

 Score = 43.9 bits (102), Expect = 6e-04
 Identities = 24/86 (27%), Positives = 42/86 (48%)
 Frame = +3

Query: 435 WEVYDGSLIRELEGSRSGSVNGMDITSDGDIFVTGGDDKIVKVWKYNEGFVTHVGLGHSM 614
           WE    S + + + S   +++ +  +SDG   +TG DD  +KVW  N GF       H+ 
Sbjct: 324 WEWQSESYVLKQQ-SHYDALSTLQYSSDGQRIITGADDGKIKVWDMNSGFCIVTFTQHTS 382

Query: 615 PITRLRISPDRQLITTVSEDGAIYFW 692
            ++ L  S    ++ + S DG++  W
Sbjct: 383 AVSGLCFSKRGNVLFSSSLDGSVRAW 408

 Score = 41.2 bits (95), Expect = 0.004
 Identities = 42/191 (21%), Positives = 75/191 (39%), Gaps = 28/191 (14%)
 Frame = +3

Query: 216 AMKEHANAVSCIRMNKDDTQCVSSSADGTCIIWCLIKY------------------TRKQ 341
           A+  H N V     +KD     + S DG   +W   KY                  TR  
Sbjct: 185 ALTGHKNTVVSGFFSKDQQTIYTVSKDGALFVW---KYSPLFQAGEVIDEEAEENKTRTH 241

Query: 342 IMFA--------NTLFRCVCWRPDECQIITSGTDRKIGYWEVYDGSLIRELEGSRSGSVN 497
           I           N+  RC  + P    ++   +    G +E+   +++ +L  ++S +++
Sbjct: 242 IWLIKERHYFNQNSKLRCAAFHPTSNLLVVGFSSGLFGIYELPSFTMLYQLSITQS-NID 300

Query: 498 GMDITSDGDIFVTGGDDKI--VKVWKYNEGFVTHVGLGHSMPITRLRISPDRQLITTVSE 671
            + + S GD ++  G  K+  + VW++           H   ++ L+ S D Q I T ++
Sbjct: 301 TLTVNSTGD-WIAIGSSKLGQLLVWEWQSESYVLKQQSHYDALSTLQYSSDGQRIITGAD 359

Query: 672 DGAIYFWKFPS 704
           DG I  W   S
Sbjct: 360 DGKIKVWDMNS 370

 Score = 37.0 bits (84), Expect = 0.071
 Identities = 20/65 (30%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
 Frame = +3

Query: 510 TSDGDIFVTGGDDKIVKVWKYN--EGFVTHVGLGHSMPITRLRISPDRQLITTVSEDGAI 683
           ++D   F++   D   ++   +  EGF      GH   +     S D+Q I TVS+DGA+
Sbjct: 155 SADSRFFISTSKDLTARLHSVDPIEGFHPCALTGHKNTVVSGFFSKDQQTIYTVSKDGAL 214

Query: 684 YFWKF 698
           + WK+
Sbjct: 215 FVWKY 219

 Score = 32.3 bits (72), Expect = 1.8
 Identities = 12/50 (24%), Positives = 30/50 (60%)
 Frame = +3

Query: 354 NTLFRCVCWRPDECQIITSGTDRKIGYWEVYDGSLIRELEGSRSGSVNGM 503
           N  F  +C+  D   ++++GT + +  +++  G LI++ + S++ S+ G+
Sbjct: 571 NKTFTSICYSADGSCVLSAGTSKYVCLYDIITGVLIKKFQLSKNESLQGV 620

 Score = 30.4 bits (67), Expect = 6.7
 Identities = 32/147 (21%), Positives = 59/147 (40%), Gaps = 5/147 (3%)
 Frame = +3

Query: 267 DTQCVSSSADGTCIIW--CLIKYTRKQIMFANTLFRCVCWRPDECQIITSGTDRKIGYWE 440
           D   + SS  G  ++W      Y  KQ    + L   + +  D  +IIT   D KI  W+
Sbjct: 309 DWIAIGSSKLGQLLVWEWQSESYVLKQQSHYDAL-STLQYSSDGQRIITGADDGKIKVWD 367

Query: 441 VYDGSLIRELEGSRSGSVNGMDITSDGDIFVTGGDDKIVKVWKY--NEGFVTHVGLGHSM 614
           +  G  I       + +V+G+  +  G++  +   D  V+ W       F T       +
Sbjct: 368 MNSGFCIVTFT-QHTSAVSGLCFSKRGNVLFSSSLDGSVRAWDLIRYRNFRTFTAPSR-V 425

Query: 615 PITRLRISPDRQLITTVSEDG-AIYFW 692
             + + + P  +++   S+D   I+ W
Sbjct: 426 QFSCIAVDPSGEIVCAGSQDSFEIFMW 452
>sp|O43017|SWD3_SCHPO Set1 complex component swd3 (Set1C component swd3) (COMPASS
           component swd3) (Complex proteins associated with set1
           protein swd3)
          Length = 380

 Score = 68.9 bits (167), Expect = 2e-11
 Identities = 41/156 (26%), Positives = 72/156 (46%), Gaps = 1/156 (0%)
 Frame = +3

Query: 228 HANAVSCIRMNKDDTQCVSSSADGTCIIWCLIKYTRKQIMFANTL-FRCVCWRPDECQII 404
           H  +V+C+ ++ +     +SS+DGT  IW  + +  +  +F +      V W      + 
Sbjct: 53  HEKSVTCVSVSPNKRWIATSSSDGTIKIWSALTFRLECTLFGHYRGISQVKWATGSKYLA 112

Query: 405 TSGTDRKIGYWEVYDGSLIRELEGSRSGSVNGMDITSDGDIFVTGGDDKIVKVWKYNEGF 584
           ++  D+ I  W+      +R L+G  +  V+ +D    G + V+G  D+ V++W   +G 
Sbjct: 113 SASDDKTIRIWDFEKRCSVRCLKG-HTNYVSSIDFNPLGTLLVSGSWDETVRIWNLQDGT 171

Query: 585 VTHVGLGHSMPITRLRISPDRQLITTVSEDGAIYFW 692
              +   HS PI  + IS D  L  T S DG    W
Sbjct: 172 CLRMLPAHSEPIISVSISADGTLCATASYDGMARIW 207

 Score = 46.2 bits (108), Expect = 1e-04
 Identities = 48/220 (21%), Positives = 88/220 (40%), Gaps = 21/220 (9%)
 Frame = +3

Query: 18  HKKGVTAVAATSDCKKIVSGGGEGQVRVWRIEECKVSQPNSIPHSHGVR--KKASNVKSV 191
           H+K VT V+ + + + I +   +G +++W     ++ +     H  G+   K A+  K +
Sbjct: 53  HEKSVTCVSVSPNKRWIATSSSDGTIKIWSALTFRL-ECTLFGHYRGISQVKWATGSKYL 111

Query: 192 VYVAHMET-------------AMKEHANAVSCIRMNKDDTQCVSSSADGTCIIWCLIKYT 332
              +  +T              +K H N VS I  N   T  VS S D T  IW L   T
Sbjct: 112 ASASDDKTIRIWDFEKRCSVRCLKGHTNYVSSIDFNPLGTLLVSGSWDETVRIWNLQDGT 171

Query: 333 RKQIMFANT-LFRCVCWRPDECQIITSGTDRKIGYWEVYDGSLIRELEGSRSGSVNGMDI 509
             +++ A++     V    D     T+  D     W+V  G  ++ L    +  ++ +  
Sbjct: 172 CLRMLPAHSEPIISVSISADGTLCATASYDGMARIWDVLSGQCLKTLVEPINVPLSNLQF 231

Query: 510 TSDGDIFVTGGDDKIVKVWKYNEG-----FVTHVGLGHSM 614
           T +    +    +  +++W Y        F +HV   +SM
Sbjct: 232 TENRKYLLVSNLNSQIRLWDYRRNRVVRIFDSHVNTRYSM 271

 Score = 33.5 bits (75), Expect = 0.79
 Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
 Frame = +3

Query: 549 KIVKVWKYNEGFVTHVGL-GHSMPITRLRISPDRQLITTVSEDGAIYFW 692
           K ++ ++ + GF  +  L GH   +T + +SP+++ I T S DG I  W
Sbjct: 33  KRIRNYESHSGFSEYCTLFGHEKSVTCVSVSPNKRWIATSSSDGTIKIW 81
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 104,631,911
Number of Sequences: 369166
Number of extensions: 2236438
Number of successful extensions: 8433
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 5702
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7258
length of database: 68,354,980
effective HSP length: 110
effective length of database: 48,034,130
effective search space used: 8598109270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)