Planaria EST Database


DrC_01814

BLASTX 2.2.13 [Nov-27-2005]

Reference:
Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schäffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= DrC_01814
         (543 letters)

Database: Non-redundant SwissProt sequences 
           184,735 sequences; 68,354,980 total letters



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

sp|Q9QXW9|LAT2_MOUSE  Large neutral amino acids transporter ...    91   2e-18
sp|Q9UHI5|LAT2_HUMAN  Large neutral amino acids transporter ...    91   2e-18
sp|Q9WVR6|LAT2_RAT  Large neutral amino acids transporter sm...    91   2e-18
sp|Q9NS82|AAA1_HUMAN  Asc-type amino acid transporter 1 (Asc-1)    75   8e-14
sp|P63116|AAA1_RAT  Asc-type amino acid transporter 1 (Asc-1...    74   2e-13
sp|Q9UM01|YLA1_HUMAN  Y+L amino acid transporter 1 (y(+)L-ty...    73   5e-13
sp|Q63016|LAT1_RAT  Large neutral amino acids transporter sm...    72   9e-13
sp|Q01650|LAT1_HUMAN  Large neutral amino acids transporter ...    72   1e-12
sp|Q9Z127|LAT1_MOUSE  Large neutral amino acids transporter ...    72   1e-12
sp|Q9UPY5|XCT_HUMAN  Cystine/glutamate transporter (Amino ac...    69   1e-11
>sp|Q9QXW9|LAT2_MOUSE Large neutral amino acids transporter small subunit 2 (L-type amino
           acid transporter 2)
          Length = 531

 Score = 90.9 bits (224), Expect = 2e-18
 Identities = 44/99 (44%), Positives = 60/99 (60%)
 Frame = +3

Query: 234 LAQKLIEMTVAIRLYGVMWWIMPIFVAMSTFGGVNGNLLATSRIFFVAAQENQMPMILET 413
           LA   + +T   +L GVM WIMPI VA+STFGGVNG+L  +SR+FF  A+E  +P +L  
Sbjct: 296 LASNAVAVTFGEKLLGVMAWIMPISVALSTFGGVNGSLFTSSRLFFAGAREGHLPSVLAM 355

Query: 414 INIKYYTPVPXXXXXXXXXXXXXXXXDINILINYMGFVN 530
           I++K  TP+P                D+  LINY+GF+N
Sbjct: 356 IHVKRCTPIPALLFTCLSTLLMLVTSDMYTLINYVGFIN 394
>sp|Q9UHI5|LAT2_HUMAN Large neutral amino acids transporter small subunit 2 (L-type amino
           acid transporter 2) (hLAT2)
          Length = 535

 Score = 90.9 bits (224), Expect = 2e-18
 Identities = 44/99 (44%), Positives = 60/99 (60%)
 Frame = +3

Query: 234 LAQKLIEMTVAIRLYGVMWWIMPIFVAMSTFGGVNGNLLATSRIFFVAAQENQMPMILET 413
           LA   + +T   +L GVM WIMPI VA+STFGGVNG+L  +SR+FF  A+E  +P +L  
Sbjct: 297 LASNAVAVTFGEKLLGVMAWIMPISVALSTFGGVNGSLFTSSRLFFAGAREGHLPSVLAM 356

Query: 414 INIKYYTPVPXXXXXXXXXXXXXXXXDINILINYMGFVN 530
           I++K  TP+P                D+  LINY+GF+N
Sbjct: 357 IHVKRCTPIPALLFTCISTLLMLVTSDMYTLINYVGFIN 395
>sp|Q9WVR6|LAT2_RAT Large neutral amino acids transporter small subunit 2 (L-type amino
           acid transporter 2)
          Length = 533

 Score = 90.9 bits (224), Expect = 2e-18
 Identities = 44/99 (44%), Positives = 60/99 (60%)
 Frame = +3

Query: 234 LAQKLIEMTVAIRLYGVMWWIMPIFVAMSTFGGVNGNLLATSRIFFVAAQENQMPMILET 413
           LA   + +T   +L GVM WIMPI VA+STFGGVNG+L  +SR+FF  A+E  +P +L  
Sbjct: 298 LASNAVAVTFGEKLLGVMAWIMPISVALSTFGGVNGSLFTSSRLFFAGAREGHLPSVLAM 357

Query: 414 INIKYYTPVPXXXXXXXXXXXXXXXXDINILINYMGFVN 530
           I++K  TP+P                D+  LINY+GF+N
Sbjct: 358 IHVKRCTPIPALLFTCLSTLLMLVTSDMYTLINYVGFIN 396
>sp|Q9NS82|AAA1_HUMAN Asc-type amino acid transporter 1 (Asc-1)
          Length = 523

 Score = 75.5 bits (184), Expect = 8e-14
 Identities = 35/99 (35%), Positives = 54/99 (54%)
 Frame = +3

Query: 234 LAQKLIEMTVAIRLYGVMWWIMPIFVAMSTFGGVNGNLLATSRIFFVAAQENQMPMILET 413
           L+   + +T   +L G   W+MP+ VA+STFGG+NG L   SR+ F  A+E  +P +L  
Sbjct: 297 LSSNAVAVTFGEKLLGYFSWVMPVSVALSTFGGINGYLFTYSRLCFSGAREGHLPSLLAM 356

Query: 414 INIKYYTPVPXXXXXXXXXXXXXXXXDINILINYMGFVN 530
           I++++ TP+P                D   LINY+ F+N
Sbjct: 357 IHVRHCTPIPALLVCCGATAVIMLVGDTYTLINYVSFIN 395
>sp|P63116|AAA1_RAT Asc-type amino acid transporter 1 (Asc-1) (D-serine transporter)
 sp|P63115|AAA1_MOUSE Asc-type amino acid transporter 1 (Asc-1) (D-serine transporter)
          Length = 530

 Score = 74.3 bits (181), Expect = 2e-13
 Identities = 35/99 (35%), Positives = 53/99 (53%)
 Frame = +3

Query: 234 LAQKLIEMTVAIRLYGVMWWIMPIFVAMSTFGGVNGNLLATSRIFFVAAQENQMPMILET 413
           L+   + +T   +L G   W+MP+ VA+STFGG+NG L  +SR+ F  A+E  +P  L  
Sbjct: 303 LSSNAVAVTFGEKLLGYFSWVMPVSVALSTFGGINGYLFTSSRLCFSGAREGHLPSFLAM 362

Query: 414 INIKYYTPVPXXXXXXXXXXXXXXXXDINILINYMGFVN 530
           I+++  TP+P                D   LINY+ F+N
Sbjct: 363 IHVRRCTPIPALLVCCGATAVIMLVGDTYTLINYVSFIN 401
>sp|Q9UM01|YLA1_HUMAN Y+L amino acid transporter 1 (y(+)L-type amino acid transporter 1)
           (y+LAT-1) (Y+LAT1) (Monocyte amino acid permease 2)
           (MOP-2)
          Length = 511

 Score = 72.8 bits (177), Expect = 5e-13
 Identities = 35/97 (36%), Positives = 57/97 (58%)
 Frame = +3

Query: 234 LAQKLIEMTVAIRLYGVMWWIMPIFVAMSTFGGVNGNLLATSRIFFVAAQENQMPMILET 413
           LA   + +T A +++G+  WI+P+ VA+S FGG+N +++A SR+FFV ++E  +P  +  
Sbjct: 291 LASDAVAVTFADQIFGIFNWIIPLSVALSCFGGLNASIVAASRLFFVGSREGHLPDAICM 350

Query: 414 INIKYYTPVPXXXXXXXXXXXXXXXXDINILINYMGF 524
           I+++ +TPVP                DI  LINY  F
Sbjct: 351 IHVERFTPVPSLLFNGIMALIYLCVEDIFQLINYYSF 387
>sp|Q63016|LAT1_RAT Large neutral amino acids transporter small subunit 1 (L-type amino
           acid transporter 1) (4F2 light chain) (4F2 LC) (4F2LC)
           (Integral membrane protein E16) (TA1 protein)
          Length = 512

 Score = 72.0 bits (175), Expect = 9e-13
 Identities = 35/84 (41%), Positives = 48/84 (57%)
 Frame = +3

Query: 279 GVMWWIMPIFVAMSTFGGVNGNLLATSRIFFVAAQENQMPMILETINIKYYTPVPXXXXX 458
           GVM WI+P+FV +S FG VNG+L  +SR+FFV ++E  +P IL  I+ +  TPVP     
Sbjct: 326 GVMSWIIPVFVGLSCFGSVNGSLFTSSRLFFVGSREGHLPSILSMIHPQLLTPVPSLVFT 385

Query: 459 XXXXXXXXXXXDINILINYMGFVN 530
                      DI  +IN+  F N
Sbjct: 386 CVMTLMYAFSRDIFSIINFFSFFN 409
>sp|Q01650|LAT1_HUMAN Large neutral amino acids transporter small subunit 1 (L-type amino
           acid transporter 1) (4F2 light chain) (4F2 LC) (4F2LC)
           (CD98 light chain) (Integral membrane protein E16)
           (hLAT1)
          Length = 507

 Score = 71.6 bits (174), Expect = 1e-12
 Identities = 35/84 (41%), Positives = 48/84 (57%)
 Frame = +3

Query: 279 GVMWWIMPIFVAMSTFGGVNGNLLATSRIFFVAAQENQMPMILETINIKYYTPVPXXXXX 458
           GVM WI+P+FV +S FG VNG+L  +SR+FFV ++E  +P IL  I+ +  TPVP     
Sbjct: 321 GVMSWIIPVFVGLSCFGSVNGSLFTSSRLFFVGSREGHLPSILSMIHPQLLTPVPSLVFT 380

Query: 459 XXXXXXXXXXXDINILINYMGFVN 530
                      DI  +IN+  F N
Sbjct: 381 CVMTLLYAFSKDIFSVINFFSFFN 404
>sp|Q9Z127|LAT1_MOUSE Large neutral amino acids transporter small subunit 1 (L-type amino
           acid transporter 1) (4F2 light chain) (4F2 LC) (4F2LC)
          Length = 512

 Score = 71.6 bits (174), Expect = 1e-12
 Identities = 34/84 (40%), Positives = 48/84 (57%)
 Frame = +3

Query: 279 GVMWWIMPIFVAMSTFGGVNGNLLATSRIFFVAAQENQMPMILETINIKYYTPVPXXXXX 458
           GVM WI+P+FV +S FG VNG+L  +SR+FFV ++E  +P +L  I+ +  TPVP     
Sbjct: 326 GVMSWIIPVFVGLSCFGSVNGSLFTSSRLFFVGSREGHLPSVLSMIHPQLLTPVPSLVFT 385

Query: 459 XXXXXXXXXXXDINILINYMGFVN 530
                      DI  +IN+  F N
Sbjct: 386 CIMTLMYAFSRDIFSIINFFSFFN 409
>sp|Q9UPY5|XCT_HUMAN Cystine/glutamate transporter (Amino acid transport system xc-)
           (xCT) (Calcium channel blocker resistance protein CCBR1)
          Length = 501

 Score = 68.6 bits (166), Expect = 1e-11
 Identities = 33/97 (34%), Positives = 55/97 (56%)
 Frame = +3

Query: 234 LAQKLIEMTVAIRLYGVMWWIMPIFVAMSTFGGVNGNLLATSRIFFVAAQENQMPMILET 413
           L    + +T + RL G     +PIFVA+S FG +NG + A SR+F+VA++E  +P IL  
Sbjct: 298 LLSNAVAVTFSERLLGNFSLAVPIFVALSCFGSMNGGVFAVSRLFYVASREGHLPEILSM 357

Query: 414 INIKYYTPVPXXXXXXXXXXXXXXXXDINILINYMGF 524
           I+++ +TP+P                D++ L+N++ F
Sbjct: 358 IHVRKHTPLPAVIVLHPLTMIMLFSGDLDSLLNFLSF 394
  Database: Non-redundant SwissProt sequences
    Posted date:  Dec 6, 2005  7:40 AM
  Number of letters in database: 68,354,980
  Number of sequences in database:  184,735
  
  Database: swissprot.01
    Posted date:  Dec 6, 2005  8:18 AM
  Number of letters in database: 66,202,850
  Number of sequences in database:  184,431
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 62,078,765
Number of Sequences: 369166
Number of extensions: 1172152
Number of successful extensions: 3033
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 2990
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3030
length of database: 68,354,980
effective HSP length: 104
effective length of database: 49,142,540
effective search space used: 3734833040
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)